RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 TMEM189-UBE2V1I3L0A0 370 aa24.16■■□□□ 1.46
PACRGL-220ENST00000508952 I3L4J1 428 aa24.16■■□□□ 1.46
PACRGL-220ENST00000508952 ADAM12O43184 909 aa24.16■■□□□ 1.46
PACRGL-220ENST00000508952 TOM1L1O75674 476 aa24.16■■□□□ 1.46
PACRGL-220ENST00000508952 C1RP00736 705 aa24.16■■□□□ 1.46
PACRGL-220ENST00000508952 RESTQ13127 1097 aa24.16■■□□□ 1.46
PACRGL-220ENST00000508952 NOLC1Q14978 699 aaKnown RBP eCLIP24.16■■□□□ 1.46
PACRGL-220ENST00000508952 FAM173BQ6P4H8 233 aa24.16■■□□□ 1.46
PACRGL-220ENST00000508952 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.16■■□□□ 1.46
PACRGL-220ENST00000508952 OTOP3Q7RTS5 596 aa24.16■■□□□ 1.46
PACRGL-220ENST00000508952 RAD54LQ92698 747 aa24.16■■□□□ 1.46
PACRGL-220ENST00000508952 LARSQ9P2J5 1176 aaKnown RBP24.16■■□□□ 1.46
PACRGL-220ENST00000508952 ODF2LQ9ULJ1 636 aa24.16■■□□□ 1.46
PACRGL-220ENST00000508952 CLUHO75153 1309 aa24.15■■□□□ 1.46
PACRGL-220ENST00000508952 N4BP1O75113 896 aaKnown RBP24.15■■□□□ 1.46
PACRGL-220ENST00000508952 FGFR3P22607 806 aa24.15■■□□□ 1.46
PACRGL-220ENST00000508952 NCKAP1LP55160 1127 aa24.15■■□□□ 1.46
PACRGL-220ENST00000508952 PTPAQ15257 358 aa24.15■■□□□ 1.46
PACRGL-220ENST00000508952 SPECC1Q5M775 1068 aa24.15■■□□□ 1.46
PACRGL-220ENST00000508952 HAUS6Q7Z4H7 955 aa24.15■■□□□ 1.46
PACRGL-220ENST00000508952 SUGP1Q8IWZ8 645 aaKnown RBP24.15■■□□□ 1.46
PACRGL-220ENST00000508952 FBXL6Q8N531 539 aa24.15■■□□□ 1.46
PACRGL-220ENST00000508952 C18orf25Q96B23 403 aaPredicted RBP24.15■■□□□ 1.46
PACRGL-220ENST00000508952 PIDD1Q9HB75 910 aa24.15■■□□□ 1.46
PACRGL-220ENST00000508952 WDR6Q9NNW5 1121 aaKnown RBP24.15■■□□□ 1.46
PACRGL-220ENST00000508952 FBXW11Q9UKB1 542 aa24.15■■□□□ 1.46
PACRGL-220ENST00000508952 FAM13AO94988 1023 aa24.14■■□□□ 1.45
PACRGL-220ENST00000508952 PDGFBP01127 241 aaPredicted RBP24.14■■□□□ 1.45
PACRGL-220ENST00000508952 TKTP29401 623 aaKnown RBP24.14■■□□□ 1.45
PACRGL-220ENST00000508952 MARCKSP29966 332 aaPredicted RBP24.14■■□□□ 1.45
PACRGL-220ENST00000508952 MATR3P43243 847 aaKnown RBP eCLIP24.14■■□□□ 1.45
PACRGL-220ENST00000508952 BRCC3P46736 316 aa24.14■■□□□ 1.45
PACRGL-220ENST00000508952 CYP26C1Q6V0L0 522 aa24.14■■□□□ 1.45
PACRGL-220ENST00000508952 ZPBP2Q6X784 338 aa24.14■■□□□ 1.45
PACRGL-220ENST00000508952 USP49Q70CQ1 688 aa24.14■■□□□ 1.45
PACRGL-220ENST00000508952 UBALD2Q8IYN6 164 aa24.14■■□□□ 1.45
PACRGL-220ENST00000508952 BICD1Q96G01 975 aa24.14■■□□□ 1.45
PACRGL-220ENST00000508952 EPSTI1Q96J88 318 aa24.14■■□□□ 1.45
PACRGL-220ENST00000508952 RHOBTB2Q9BYZ6 727 aa24.14■■□□□ 1.45
PACRGL-220ENST00000508952 HAPLN2Q9GZV7 340 aa24.14■■□□□ 1.45
PACRGL-220ENST00000508952 SLC38A7Q9NVC3 462 aa24.14■■□□□ 1.45
PACRGL-220ENST00000508952 ZDHHC7Q9NXF8 308 aa24.14■■□□□ 1.45
PACRGL-220ENST00000508952 CNTN3Q9P232 1028 aa24.14■■□□□ 1.45
PACRGL-220ENST00000508952 DOCK6Q96HP0 2047 aa24.13■■□□□ 1.45
PACRGL-220ENST00000508952 PODXLO00592 558 aa24.13■■□□□ 1.45
PACRGL-220ENST00000508952 CLDN3O15551 220 aa24.13■■□□□ 1.45
PACRGL-220ENST00000508952 ZMYND10O75800 440 aa24.13■■□□□ 1.45
PACRGL-220ENST00000508952 PAPLNO95428 1278 aa24.13■■□□□ 1.45
PACRGL-220ENST00000508952 KRT18P05783 430 aaKnown RBP24.13■■□□□ 1.45
PACRGL-220ENST00000508952 KCNE1P15382 129 aa24.13■■□□□ 1.45
PACRGL-220ENST00000508952 GBP2P32456 591 aaPredicted RBP24.13■■□□□ 1.45
PACRGL-220ENST00000508952 CEBPZQ03701 1054 aaKnown RBP24.13■■□□□ 1.45
PACRGL-220ENST00000508952 PDXDC1Q6P996 788 aa24.13■■□□□ 1.45
PACRGL-220ENST00000508952 MYCT1Q8N699 235 aa24.13■■□□□ 1.45
PACRGL-220ENST00000508952 LARP4BQ92615 738 aaKnown RBP24.13■■□□□ 1.45
PACRGL-220ENST00000508952 PRKD2Q9BZL6 878 aa24.13■■□□□ 1.45
PACRGL-220ENST00000508952 DOCK8Q8NF50 2099 aa24.13■■□□□ 1.45
PACRGL-220ENST00000508952 H0YCG3 227 aa24.12■■□□□ 1.45
PACRGL-220ENST00000508952 K7ENM7 598 aa24.12■■□□□ 1.45
PACRGL-220ENST00000508952 OR1D2P34982 312 aa24.12■■□□□ 1.45
PACRGL-220ENST00000508952 ZNF131P52739 623 aa24.12■■□□□ 1.45
PACRGL-220ENST00000508952 MCL1Q07820 350 aa24.12■■□□□ 1.45
PACRGL-220ENST00000508952 SLC10A6Q3KNW5 377 aa24.12■■□□□ 1.45
PACRGL-220ENST00000508952 DDX27Q96GQ7 796 aaKnown RBP24.12■■□□□ 1.45
PACRGL-220ENST00000508952 INTS4Q96HW7 963 aaKnown RBP24.12■■□□□ 1.45
PACRGL-220ENST00000508952 CCSER1Q9C0I3 900 aa24.12■■□□□ 1.45
PACRGL-220ENST00000508952 ZHX3Q9H4I2 956 aa24.12■■□□□ 1.45
PACRGL-220ENST00000508952 PARVGQ9HBI0 331 aa24.12■■□□□ 1.45
PACRGL-220ENST00000508952 FBXO2Q9UK22 296 aaPredicted RBP24.12■■□□□ 1.45
PACRGL-220ENST00000508952 K7ELQ4 463 aaPredicted RBP24.11■■□□□ 1.45
PACRGL-220ENST00000508952 TRAPPC3O43617 180 aa24.11■■□□□ 1.45
PACRGL-220ENST00000508952 CXCL8P10145 99 aa24.11■■□□□ 1.45
PACRGL-220ENST00000508952 VCPP55072 806 aaKnown RBP24.11■■□□□ 1.45
PACRGL-220ENST00000508952 IER5LQ5T953 404 aa24.11■■□□□ 1.45
PACRGL-220ENST00000508952 LIN9Q5TKA1 542 aa24.11■■□□□ 1.45
PACRGL-220ENST00000508952 RSPO2Q6UXX9 243 aaPredicted RBP24.11■■□□□ 1.45
PACRGL-220ENST00000508952 TMEM130Q8N3G9 435 aa24.11■■□□□ 1.45
PACRGL-220ENST00000508952 STAMQ92783 540 aa24.11■■□□□ 1.45
PACRGL-220ENST00000508952 CLIC6Q96NY7 704 aa24.11■■□□□ 1.45
PACRGL-220ENST00000508952 MYADMQ96S97 322 aa24.11■■□□□ 1.45
PACRGL-220ENST00000508952 MTRRQ9UBK8 725 aa24.11■■□□□ 1.45
PACRGL-220ENST00000508952 TBX20Q9UMR3 447 aa24.11■■□□□ 1.45
PACRGL-220ENST00000508952 MTMR6Q9Y217 621 aa24.11■■□□□ 1.45
PACRGL-220ENST00000508952 CDY1Q9Y6F8 540 aa24.11■■□□□ 1.45
PACRGL-220ENST00000508952 HNRNPDLO14979 420 aaKnown RBP24.1■■□□□ 1.45
PACRGL-220ENST00000508952 C8AP07357 584 aa24.1■■□□□ 1.45
PACRGL-220ENST00000508952 LIG4P49917 911 aa24.1■■□□□ 1.45
PACRGL-220ENST00000508952 RAB33AQ14088 237 aa24.1■■□□□ 1.45
PACRGL-220ENST00000508952 KCNH6Q9H252 994 aa24.1■■□□□ 1.45
PACRGL-220ENST00000508952 KCNK12Q9HB15 430 aa24.1■■□□□ 1.45
PACRGL-220ENST00000508952 TUBGCP4Q9UGJ1 667 aa24.1■■□□□ 1.45
PACRGL-220ENST00000508952 TRAK2O60296 914 aa24.09■■□□□ 1.45
PACRGL-220ENST00000508952 TBCAO75347 108 aaKnown RBP24.09■■□□□ 1.45
PACRGL-220ENST00000508952 TNFSF9P41273 254 aa24.09■■□□□ 1.45
PACRGL-220ENST00000508952 SPAG1Q07617 926 aa24.09■■□□□ 1.45
PACRGL-220ENST00000508952 PPM1LQ5SGD2 360 aa24.09■■□□□ 1.45
PACRGL-220ENST00000508952 ANKS3Q6ZW76 656 aa24.09■■□□□ 1.45
PACRGL-220ENST00000508952 GET4Q7L5D6 327 aaPredicted RBP24.09■■□□□ 1.45
PACRGL-220ENST00000508952 RSAD2Q8WXG1 361 aa24.09■■□□□ 1.45
PACRGL-220ENST00000508952 KCNN1Q92952 543 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms