RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 DCAF4Q8WV16 495 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 UBLCP1Q8WVY7 318 aaPredicted RBP6.33□□□□□ -1.4
CLDND1-213ENST00000506927 SHISA4Q96DD7 197 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 PGM2Q96G03 612 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 RBM17Q96I25 401 aaKnown RBP6.33□□□□□ -1.4
CLDND1-213ENST00000506927 INPP4AQ96PE3 977 aaPredicted RBP6.33□□□□□ -1.4
CLDND1-213ENST00000506927 IWS1Q96ST2 819 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 FMO2Q99518 471 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 PLIN2Q99541 437 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 CCDC77Q9BR77 488 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 TMEM109Q9BVC6 243 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 ZNF576Q9H609 170 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 BATF3Q9NR55 127 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 KLC4Q9NSK0 619 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 BLOC1S4Q9NUP1 217 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 ADAMTS1Q9UHI8 967 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 KCNG1Q9UIX4 513 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 FRMD4BQ9Y2L6 1034 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 DUSP10Q9Y6W6 482 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 WNK3Q9BYP7 1800 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 KIF13BQ9NQT8 1826 aa6.33□□□□□ -1.4
CLDND1-213ENST00000506927 GRIN2DO15399 1336 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 STRCP1A6NGW2 1772 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 LOC100289279A0A1B0GTE1 492 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 FRMD3A2A2Y4 597 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 ZNF233A6NK53 670 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 PP2D1A8MPX8 630 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 ZNF263O14978 683 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 ZBTB5O15062 677 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 TRAPPC3O43617 180 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 BUB1O43683 1085 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 CYTH3O43739 400 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 NMT2O60551 498 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 RPS6KA4O75676 772 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 SSBP05455 408 aaKnown RBP eCLIP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 GLI1P08151 1106 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 NUDT17P0C025 328 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 SNHG28P0DPA3 235 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 PDHBP11177 359 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 UCHL3P15374 230 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 RPA1P27694 616 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 CXCR5P32302 372 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 HSD17B3P37058 310 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 CETN2P41208 172 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 TNNI2P48788 182 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 CARSP49589 748 aaKnown RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 HADHBP55084 474 aaKnown RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 GSCP56915 257 aaPredicted RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 PDCLQ13371 301 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 Q4G0T1 1027 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 TTMPQ5BVD1 217 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 CYFIP1Q7L576 1253 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 DAAM2Q86T65 1068 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 GPBP1Q86WP2 473 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 COL23A1Q86Y22 540 aaPredicted RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 APLFQ8IW19 511 aaPredicted RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 SYT2Q8N9I0 419 aaPredicted RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 NEK9Q8TD19 979 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 RASGRP4Q8TDF6 673 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 SH3RF3Q8TEJ3 882 aaPredicted RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 GRK7Q8WTQ7 553 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 RFFLQ8WZ73 363 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 SEC14L1Q92503 715 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 RPGRQ92834 1020 aaKnown RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 GRAMD1AQ96CP6 724 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 MTMR8Q96EF0 704 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 CHMP6Q96FZ7 201 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 RSRC1Q96IZ7 334 aaKnown RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 RNPC3Q96LT9 517 aaKnown RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 RPS6KC1Q96S38 1066 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 PIGSQ96S52 555 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 MMTAG2Q9BU76 263 aaKnown RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 POLR3CQ9BUI4 534 aaPredicted RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 RUSC1Q9BVN2 902 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 TIPINQ9BVW5 301 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 STK33Q9BYT3 514 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 BCO2Q9BYV7 579 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 TRIM7Q9C029 511 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 DHX36Q9H2U1 1008 aaKnown RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 CENPHQ9H3R5 247 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 PPCSQ9HAB8 311 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 VAT1LQ9HCJ6 419 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 TUFT1Q9NNX1 390 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 NLRC4Q9NPP4 1024 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 MTMR4Q9NYA4 1195 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 BCCIPQ9P287 314 aaKnown RBP eCLIP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 NOC2LQ9Y3T9 749 aaKnown RBP6.32□□□□□ -1.4
CLDND1-213ENST00000506927 DOT1LQ8TEK3 1739 aa6.32□□□□□ -1.4
CLDND1-213ENST00000506927 SPATA31A1Q5TZJ5 1347 aa6.31□□□□□ -1.4
CLDND1-213ENST00000506927 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.31□□□□□ -1.4
CLDND1-213ENST00000506927 ANKRD62A6NC57 917 aa6.31□□□□□ -1.4
CLDND1-213ENST00000506927 C5orf60A6NFR6 353 aa6.31□□□□□ -1.4
CLDND1-213ENST00000506927 RGS16O15492 202 aaPredicted RBP6.31□□□□□ -1.4
CLDND1-213ENST00000506927 RAD51CO43502 376 aa6.31□□□□□ -1.4
CLDND1-213ENST00000506927 COBLO75128 1261 aa6.31□□□□□ -1.4
CLDND1-213ENST00000506927 PPFIA2O75334 1257 aa6.31□□□□□ -1.4
CLDND1-213ENST00000506927 DNAJC8O75937 253 aaPredicted RBP6.31□□□□□ -1.4
CLDND1-213ENST00000506927 DLGAP3O95886 979 aa6.31□□□□□ -1.4
CLDND1-213ENST00000506927 B3GALT4O96024 378 aa6.31□□□□□ -1.4
CLDND1-213ENST00000506927 KRT14P02533 472 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms