RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 TMEM130Q8N3G9 435 aa5.05□□□□□ -1.6
VPS52-222ENST00000495981 MIGA1Q8NAN2 632 aa5.05□□□□□ -1.6
VPS52-222ENST00000495981 ACER1Q8TDN7 264 aa5.05□□□□□ -1.6
VPS52-222ENST00000495981 WHAMMQ8TF30 809 aa5.05□□□□□ -1.6
VPS52-222ENST00000495981 EZH1Q92800 747 aaPredicted RBP5.05□□□□□ -1.6
VPS52-222ENST00000495981 EAF2Q96CJ1 260 aaPredicted RBP5.05□□□□□ -1.6
VPS52-222ENST00000495981 NEUROD6Q96NK8 337 aa5.05□□□□□ -1.6
VPS52-222ENST00000495981 FCRL3Q96P31 734 aaPredicted RBP5.05□□□□□ -1.6
VPS52-222ENST00000495981 DSCC1Q9BVC3 393 aa5.05□□□□□ -1.6
VPS52-222ENST00000495981 CDIP1Q9H305 208 aa5.05□□□□□ -1.6
VPS52-222ENST00000495981 LUC7LQ9NQ29 371 aaKnown RBP5.05□□□□□ -1.6
VPS52-222ENST00000495981 THG1LQ9NWX6 298 aaKnown RBP5.05□□□□□ -1.6
VPS52-222ENST00000495981 TMOD4Q9NZQ9 345 aa5.05□□□□□ -1.6
VPS52-222ENST00000495981 FRYLO94915 3013 aa5.05□□□□□ -1.6
VPS52-222ENST00000495981 MYH4Q9Y623 1939 aa5.05□□□□□ -1.6
VPS52-222ENST00000495981 LAMA4Q16363 1823 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 MCM3APO60318 1980 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 A0A1W2PRG0 241 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 SLC15A5A6NIM6 579 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 CCER2I3L3R5 266 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 MEIS1O00470 390 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 TGM5O43548 720 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 PCDHGA12O60330 932 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 IDH1O75874 414 aaKnown RBP5.04□□□□□ -1.6
VPS52-222ENST00000495981 ALX3O95076 343 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 BAG3O95817 575 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 SOD2P04179 222 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 CD3EP07766 207 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 NFICP08651 508 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 ARP10275 920 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 LPOP22079 712 aaPredicted RBP5.04□□□□□ -1.6
VPS52-222ENST00000495981 KCNA5P22460 613 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 CYP7A1P22680 504 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 AMPD1P23109 780 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 PLCD1P51178 756 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 VCPP55072 806 aaKnown RBP5.04□□□□□ -1.6
VPS52-222ENST00000495981 TAP1Q03518 808 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 NMIQ13287 307 aaPredicted RBP5.04□□□□□ -1.6
VPS52-222ENST00000495981 CDK5R2Q13319 367 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 KLF1Q13351 362 aaPredicted RBP5.04□□□□□ -1.6
VPS52-222ENST00000495981 PPIGQ13427 754 aaKnown RBP eCLIP5.04□□□□□ -1.62e-7■■■■□ 24.1
VPS52-222ENST00000495981 HDAC1Q13547 482 aaPredicted RBP5.04□□□□□ -1.6
VPS52-222ENST00000495981 KCTD2Q14681 263 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 LEXMQ3ZCV2 418 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 MBLAC2Q68D91 279 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 SHISA2Q6UWI4 295 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 EPM2AIP1Q7L775 607 aaPredicted RBP5.04□□□□□ -1.6
VPS52-222ENST00000495981 ZC3H7AQ8IWR0 971 aaKnown RBP5.04□□□□□ -1.6
VPS52-222ENST00000495981 CPA6Q8N4T0 437 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 CHST14Q8NCH0 376 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 C1orf162Q8NEQ5 155 aaPredicted RBP5.04□□□□□ -1.6
VPS52-222ENST00000495981 USP33Q8TEY7 942 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 ARNTL2Q8WYA1 636 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 ARPC5LQ9BPX5 153 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 HDAC8Q9BY41 377 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 RPAP3Q9H6T3 665 aaPredicted RBP5.04□□□□□ -1.6
VPS52-222ENST00000495981 UBE2ZQ9H832 354 aaPredicted RBP5.04□□□□□ -1.6
VPS52-222ENST00000495981 IL23AQ9NPF7 189 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 ANLNQ9NQW6 1124 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 C1GALT1Q9NS00 363 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 MUTYHQ9UIF7 546 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 SERPINB13Q9UIV8 391 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 RABGAP1Q9Y3P9 1069 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 PCDHGA9Q9Y5G4 932 aaKnown RBP5.04□□□□□ -1.6
VPS52-222ENST00000495981 PCDHGA8Q9Y5G5 932 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 PCDHGA7Q9Y5G6 932 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 PCDHGA6Q9Y5G7 932 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 PCDHGA3Q9Y5H0 932 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 PCDHGA2Q9Y5H1 932 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 BACE2Q9Y5Z0 518 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 COL4A6Q14031 1691 aa5.04□□□□□ -1.6
VPS52-222ENST00000495981 SMG1Q96Q15 3661 aaKnown RBP5.04□□□□□ -1.6
VPS52-222ENST00000495981 LCHNA4D1U4 455 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 GOLGA6CA6NDK9 693 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 GOLGA6BA6NDN3 693 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 C2orf71A6NGG8 1288 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 H3BQ06 376 aaPredicted RBP5.03□□□□□ -1.6
VPS52-222ENST00000495981 MEFVO15553 781 aaPredicted RBP5.03□□□□□ -1.6
VPS52-222ENST00000495981 GAS7O60861 476 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 ADAMTS4O75173 837 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 LEFTY1O75610 366 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 FGBP02675 491 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 HLA-DOAP06340 250 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 GSNP06396 782 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 GOLGA6DP0CG33 693 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 SRGAP2CP0DJJ0 459 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 CYP2D6P10635 497 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 PF4V1P10720 104 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 RBP3P10745 1247 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 PLS3P13797 630 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 PDE6AP16499 860 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 PTGS1P23219 599 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 ADORA2AP29274 412 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 LTBRP36941 435 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 CCL23P55773 120 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 RAC1P63000 192 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 POU4F1Q01851 419 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 ZP2Q05996 745 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 SEPT2Q15019 361 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 SGO2Q562F6 1265 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms