RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 ZPBP2Q6X784 338 aa22.33■■□□□ 1.17
TRIM8-203ENST00000479004 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.33■■□□□ 1.17
TRIM8-203ENST00000479004 OTOP3Q7RTS5 596 aa22.33■■□□□ 1.17
TRIM8-203ENST00000479004 GPBP1Q86WP2 473 aa22.33■■□□□ 1.17
TRIM8-203ENST00000479004 ZNF707Q96C28 371 aaPredicted RBP22.33■■□□□ 1.17
TRIM8-203ENST00000479004 SNX27Q96L92 541 aa22.33■■□□□ 1.17
TRIM8-203ENST00000479004 ZMAT2Q96NC0 199 aaKnown RBP22.33■■□□□ 1.17
TRIM8-203ENST00000479004 REEP2Q9BRK0 252 aa22.33■■□□□ 1.17
TRIM8-203ENST00000479004 KCNH6Q9H252 994 aa22.33■■□□□ 1.17
TRIM8-203ENST00000479004 GOLGA2P5Q9HBQ8 144 aa22.33■■□□□ 1.17
TRIM8-203ENST00000479004 WDR6Q9NNW5 1121 aaKnown RBP22.33■■□□□ 1.17
TRIM8-203ENST00000479004 CLIC4Q9Y696 253 aa22.33■■□□□ 1.17
TRIM8-203ENST00000479004 ZNF318Q5VUA4 2279 aa22.32■■□□□ 1.16
TRIM8-203ENST00000479004 ASGR2P07307 311 aa22.32■■□□□ 1.16
TRIM8-203ENST00000479004 HARSP12081 509 aaKnown RBP22.32■■□□□ 1.16
TRIM8-203ENST00000479004 KCNE1P15382 129 aa22.32■■□□□ 1.16
TRIM8-203ENST00000479004 PLCG1P19174 1290 aa22.32■■□□□ 1.16
TRIM8-203ENST00000479004 FGFR3P22607 806 aa22.32■■□□□ 1.16
TRIM8-203ENST00000479004 SOX4Q06945 474 aaPredicted RBP22.32■■□□□ 1.16
TRIM8-203ENST00000479004 MTMR3Q13615 1198 aa22.32■■□□□ 1.16
TRIM8-203ENST00000479004 KARSQ15046 597 aaKnown RBP22.32■■□□□ 1.16
TRIM8-203ENST00000479004 UBALD2Q8IYN6 164 aa22.32■■□□□ 1.16
TRIM8-203ENST00000479004 RAD54LQ92698 747 aa22.32■■□□□ 1.16
TRIM8-203ENST00000479004 CCSER1Q9C0I3 900 aa22.32■■□□□ 1.16
TRIM8-203ENST00000479004 SLC38A7Q9NVC3 462 aa22.32■■□□□ 1.16
TRIM8-203ENST00000479004 ZDHHC7Q9NXF8 308 aa22.32■■□□□ 1.16
TRIM8-203ENST00000479004 CNTN3Q9P232 1028 aa22.32■■□□□ 1.16
TRIM8-203ENST00000479004 PDCD11Q14690 1871 aaKnown RBP22.32■■□□□ 1.16
TRIM8-203ENST00000479004 H0YCG3 227 aa22.31■■□□□ 1.16
TRIM8-203ENST00000479004 MEFVO15553 781 aaPredicted RBP22.31■■□□□ 1.16
TRIM8-203ENST00000479004 F13A1P00488 732 aa22.31■■□□□ 1.16
TRIM8-203ENST00000479004 NUCB2P80303 420 aa22.31■■□□□ 1.16
TRIM8-203ENST00000479004 DHX8Q14562 1220 aaKnown RBP22.31■■□□□ 1.16
TRIM8-203ENST00000479004 MCM6Q14566 821 aa22.31■■□□□ 1.16
TRIM8-203ENST00000479004 NOLC1Q14978 699 aaKnown RBP eCLIP22.31■■□□□ 1.16
TRIM8-203ENST00000479004 HAUS6Q7Z4H7 955 aa22.31■■□□□ 1.16
TRIM8-203ENST00000479004 C3orf58Q8NDZ4 430 aa22.31■■□□□ 1.16
TRIM8-203ENST00000479004 SMG7Q92540 1137 aaKnown RBP22.31■■□□□ 1.16
TRIM8-203ENST00000479004 DDX27Q96GQ7 796 aaKnown RBP22.31■■□□□ 1.16
TRIM8-203ENST00000479004 IPO9Q96P70 1041 aaKnown RBP22.31■■□□□ 1.16
TRIM8-203ENST00000479004 PRKD2Q9BZL6 878 aa22.31■■□□□ 1.16
TRIM8-203ENST00000479004 ANKFY1Q9P2R3 1169 aa22.31■■□□□ 1.16
TRIM8-203ENST00000479004 FBXW11Q9UKB1 542 aa22.31■■□□□ 1.16
TRIM8-203ENST00000479004 CLDN3O15551 220 aa22.3■■□□□ 1.16
TRIM8-203ENST00000479004 ZMYND10O75800 440 aa22.3■■□□□ 1.16
TRIM8-203ENST00000479004 ZNF131P52739 623 aa22.3■■□□□ 1.16
TRIM8-203ENST00000479004 MCL1Q07820 350 aa22.3■■□□□ 1.16
TRIM8-203ENST00000479004 PKP1Q13835 747 aa22.3■■□□□ 1.16
TRIM8-203ENST00000479004 FBXL6Q8N531 539 aa22.3■■□□□ 1.16
TRIM8-203ENST00000479004 RASSF8Q8NHQ8 419 aa22.3■■□□□ 1.16
TRIM8-203ENST00000479004 HAPLN2Q9GZV7 340 aa22.3■■□□□ 1.16
TRIM8-203ENST00000479004 SMOC2Q9H3U7 446 aa22.3■■□□□ 1.16
TRIM8-203ENST00000479004 PODXLO00592 558 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 ADAM12O43184 909 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 TRAPPC3O43617 180 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 FAM13AO94988 1023 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 DDIT3P35638 169 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 BRCC3P46736 316 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 SLC10A6Q3KNW5 377 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 SEZ6Q53EL9 994 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 FOXD4L5Q5VV16 416 aaPredicted RBP22.29■■□□□ 1.16
TRIM8-203ENST00000479004 FAM173BQ6P4H8 233 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 USP49Q70CQ1 688 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 SUGP1Q8IWZ8 645 aaKnown RBP22.29■■□□□ 1.16
TRIM8-203ENST00000479004 MYCT1Q8N699 235 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 FOXD4L4Q8WXT5 416 aaPredicted RBP22.29■■□□□ 1.16
TRIM8-203ENST00000479004 LARP4BQ92615 738 aaKnown RBP22.29■■□□□ 1.16
TRIM8-203ENST00000479004 STAMQ92783 540 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 EPSTI1Q96J88 318 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 PIDD1Q9HB75 910 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 PARVGQ9HBI0 331 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 MTRRQ9UBK8 725 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 FBXO2Q9UK22 296 aaPredicted RBP22.29■■□□□ 1.16
TRIM8-203ENST00000479004 SRPRBQ9Y5M8 271 aaKnown RBP22.29■■□□□ 1.16
TRIM8-203ENST00000479004 CLUHO75153 1309 aa22.29■■□□□ 1.16
TRIM8-203ENST00000479004 KMT2EQ8IZD2 1858 aa22.28■■□□□ 1.16
TRIM8-203ENST00000479004 N4BP1O75113 896 aaKnown RBP22.28■■□□□ 1.16
TRIM8-203ENST00000479004 SCP2P22307 547 aa22.28■■□□□ 1.16
TRIM8-203ENST00000479004 TKTP29401 623 aaKnown RBP22.28■■□□□ 1.16
TRIM8-203ENST00000479004 MARCKSP29966 332 aaPredicted RBP22.28■■□□□ 1.16
TRIM8-203ENST00000479004 RAB33AQ14088 237 aa22.28■■□□□ 1.16
TRIM8-203ENST00000479004 C18orf25Q96B23 403 aaPredicted RBP22.28■■□□□ 1.16
TRIM8-203ENST00000479004 CIZ1Q9ULV3 898 aaPredicted RBP22.28■■□□□ 1.16
TRIM8-203ENST00000479004 TBX20Q9UMR3 447 aa22.28■■□□□ 1.16
TRIM8-203ENST00000479004 BACE2Q9Y5Z0 518 aa22.28■■□□□ 1.16
TRIM8-203ENST00000479004 I3L4J1 428 aa22.27■■□□□ 1.16
TRIM8-203ENST00000479004 TRAK2O60296 914 aa22.27■■□□□ 1.16
TRIM8-203ENST00000479004 PIGRP01833 764 aa22.27■■□□□ 1.16
TRIM8-203ENST00000479004 KRT18P05783 430 aaKnown RBP22.27■■□□□ 1.16
TRIM8-203ENST00000479004 RPL9P32969 192 aaKnown RBP22.27■■□□□ 1.16
TRIM8-203ENST00000479004 MATR3P43243 847 aaKnown RBP eCLIP22.27■■□□□ 1.16
TRIM8-203ENST00000479004 SPECC1Q5M775 1068 aa22.27■■□□□ 1.16
TRIM8-203ENST00000479004 RSPO2Q6UXX9 243 aaPredicted RBP22.27■■□□□ 1.16
TRIM8-203ENST00000479004 BICD1Q96G01 975 aa22.27■■□□□ 1.16
TRIM8-203ENST00000479004 FIZ1Q96SL8 496 aa22.27■■□□□ 1.16
TRIM8-203ENST00000479004 MYH15Q9Y2K3 1946 aa22.27■■□□□ 1.16
TRIM8-203ENST00000479004 K7ENM7 598 aa22.26■■□□□ 1.15
TRIM8-203ENST00000479004 GBP2P32456 591 aaPredicted RBP22.26■■□□□ 1.15
TRIM8-203ENST00000479004 OR1D2P34982 312 aa22.26■■□□□ 1.15
TRIM8-203ENST00000479004 LIN9Q5TKA1 542 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms