RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 PLEKHO2Q8TD55 490 aa14.33□□□□□ -0.12
PSMB4-204ENST00000476467 PARD3BQ8TEW8 1205 aa14.33□□□□□ -0.12
PSMB4-204ENST00000476467 ANKRD7Q92527 254 aa14.33□□□□□ -0.12
PSMB4-204ENST00000476467 SNX27Q96L92 541 aa14.33□□□□□ -0.12
PSMB4-204ENST00000476467 TUBGCP2Q9BSJ2 902 aa14.33□□□□□ -0.12
PSMB4-204ENST00000476467 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
PSMB4-204ENST00000476467 ELAC1Q9H777 363 aaKnown RBP14.33□□□□□ -0.12
PSMB4-204ENST00000476467 PLEKHA5Q9HAU0 1116 aa14.33□□□□□ -0.12
PSMB4-204ENST00000476467 PCDH10Q9P2E7 1040 aa14.33□□□□□ -0.12
PSMB4-204ENST00000476467 PARP2Q9UGN5 583 aa14.33□□□□□ -0.12
PSMB4-204ENST00000476467 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.33□□□□□ -0.12
PSMB4-204ENST00000476467 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.32□□□□□ -0.12
PSMB4-204ENST00000476467 TTC26A0AVF1 554 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 MEFVO15553 781 aaPredicted RBP14.32□□□□□ -0.12
PSMB4-204ENST00000476467 BAIAP3O94812 1187 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 EOMESO95936 686 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 ACRP10323 421 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 ACTN1P12814 892 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 AKAP5P24588 427 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 DCAF17Q5H9S7 520 aaPredicted RBP14.32□□□□□ -0.12
PSMB4-204ENST00000476467 SLC35C1Q96A29 364 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 CCDC127Q96BQ5 260 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 FAM212AQ96EL1 285 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 FNBP1Q96RU3 617 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 CGRRF1Q99675 332 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 LBHD1Q9BQE6 289 aaPredicted RBP14.32□□□□□ -0.12
PSMB4-204ENST00000476467 ASB7Q9H672 318 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 PDE11AQ9HCR9 933 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 UBN1Q9NPG3 1134 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
PSMB4-204ENST00000476467 TMEM161AQ9NX61 479 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 TAB2Q9NYJ8 693 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 GIT1Q9Y2X7 761 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 TTC3P53804 2025 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 LRRC10BA6NIK2 292 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 LRRIQ3A6PVS8 624 aaPredicted RBP14.32□□□□□ -0.12
PSMB4-204ENST00000476467 TRIM49P0CI25 452 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 TRIM49CP0CI26 452 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 PBX1P40424 430 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 COPB1P53618 953 aaKnown RBP14.32□□□□□ -0.12
PSMB4-204ENST00000476467 WNT7BP56706 349 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 TCERG1LQ5VWI1 586 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 RNF169Q8NCN4 708 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 LPPQ93052 612 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 CNTN3Q9P232 1028 aa14.32□□□□□ -0.12
PSMB4-204ENST00000476467 LACTBL1A8MY62 500 aa14.31□□□□□ -0.12
PSMB4-204ENST00000476467 ARHGAP6O43182 974 aa14.31□□□□□ -0.12
PSMB4-204ENST00000476467 TEX33O43247 280 aa14.31□□□□□ -0.12
PSMB4-204ENST00000476467 STX10O60499 249 aa14.31□□□□□ -0.12
PSMB4-204ENST00000476467 TUBB4AP04350 444 aa14.31□□□□□ -0.12
PSMB4-204ENST00000476467 DLATP10515 647 aaKnown RBP14.31□□□□□ -0.12
PSMB4-204ENST00000476467 IBSPP21815 317 aaPredicted RBP14.31□□□□□ -0.12
PSMB4-204ENST00000476467 DLG4P78352 724 aa14.31□□□□□ -0.12
PSMB4-204ENST00000476467 CLDN10P78369 228 aa14.31□□□□□ -0.12
PSMB4-204ENST00000476467 PDCD11Q14690 1871 aaKnown RBP14.31□□□□□ -0.12
PSMB4-204ENST00000476467 XKR4Q5GH76 650 aa14.31□□□□□ -0.12
PSMB4-204ENST00000476467 C1orf220Q5T0J3 134 aa14.31□□□□□ -0.12
PSMB4-204ENST00000476467 PSRC1Q6PGN9 363 aaPredicted RBP14.31□□□□□ -0.12
PSMB4-204ENST00000476467 ALKAL1Q6UXT8 129 aa14.31□□□□□ -0.12
PSMB4-204ENST00000476467 AGMOQ6ZNB7 445 aa14.31□□□□□ -0.12
PSMB4-204ENST00000476467 WDR49Q8IV35 697 aa14.31□□□□□ -0.12
PSMB4-204ENST00000476467 RSAD1Q9HA92 442 aa14.31□□□□□ -0.12
PSMB4-204ENST00000476467 MEIS3P2A8K0S8 358 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 AFPP02771 609 aaKnown RBP14.3□□□□□ -0.12
PSMB4-204ENST00000476467 MIIPQ5JXC2 388 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 NPAS4Q8IUM7 802 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 TSPAN18Q96SJ8 248 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 BAG1Q99933 345 aaPredicted RBP14.3□□□□□ -0.12
PSMB4-204ENST00000476467 DERAQ9Y315 318 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 TRIP11Q15643 1979 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 LGALS16A8MUM7 142 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 FGBP02675 491 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 GTF2H1P32780 548 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 ADKP55263 362 aaKnown RBP14.3□□□□□ -0.12
PSMB4-204ENST00000476467 WDR5P61964 334 aaKnown RBP14.3□□□□□ -0.12
PSMB4-204ENST00000476467 FILIP1LQ4L180 1135 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 VWA3BQ502W6 1294 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 JADE1Q6IE81 842 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.3□□□□□ -0.121e-9■■■■■ 34.9
PSMB4-204ENST00000476467 C16orf59Q7L2K0 433 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 NT5DC4Q86YG4 428 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 REXO1L1PQ8IX06 675 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 EFCAB13Q8IY85 973 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 RPS6KC1Q96S38 1066 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 VPS16Q9H269 839 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 NDST4Q9H3R1 872 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 KLK14Q9P0G3 267 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 LRFN2Q9ULH4 789 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 C2CD2Q9Y426 696 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 PCDHB7Q9Y5E2 793 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 PTPRJQ12913 1337 aa14.3□□□□□ -0.12
PSMB4-204ENST00000476467 TULP1O00294 542 aaPredicted RBP14.29□□□□□ -0.12
PSMB4-204ENST00000476467 INPPL1O15357 1258 aa14.29□□□□□ -0.12
PSMB4-204ENST00000476467 HOXA2O43364 376 aa14.29□□□□□ -0.12
PSMB4-204ENST00000476467 AMHP03971 560 aa14.29□□□□□ -0.12
PSMB4-204ENST00000476467 NFICP08651 508 aa14.29□□□□□ -0.12
PSMB4-204ENST00000476467 KCNE1P15382 129 aa14.29□□□□□ -0.12
PSMB4-204ENST00000476467 TNNI1P19237 187 aa14.29□□□□□ -0.12
PSMB4-204ENST00000476467 MLH1P40692 756 aa14.29□□□□□ -0.12
PSMB4-204ENST00000476467 AP3M2P53677 418 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms