RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 RPL9P32969 192 aaKnown RBP14.76□□□□□ -0.05
HMGN1-211ENST00000471260 CLCNKBP51801 687 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 NCKAP1LP55160 1127 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 MCL1Q07820 350 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 RAD51AP2Q09MP3 1159 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 PSMD5Q16401 504 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 KYAT1Q16773 422 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 GLRA4Q5JXX5 417 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 FBXL6Q8N531 539 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 CEP120Q8N960 986 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 SMG7Q92540 1137 aaKnown RBP14.76□□□□□ -0.05
HMGN1-211ENST00000471260 SNX27Q96L92 541 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 CLSTN3Q9BQT9 956 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 PRKD2Q9BZL6 878 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 PLEKHA5Q9HAU0 1116 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 PARVGQ9HBI0 331 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 LIMD1Q9UGP4 676 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 MORC2Q9Y6X9 1032 aaPredicted RBP14.76□□□□□ -0.05
HMGN1-211ENST00000471260 MYH11P35749 1972 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 DENND4AQ7Z401 1863 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 ZNF318Q5VUA4 2279 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 ZMYND10O75800 440 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 RPL17P18621 184 aaKnown RBP14.75□□□□□ -0.05
HMGN1-211ENST00000471260 HOXA9P31269 272 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 ZNF131P52739 623 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 OSTNP61366 133 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 NOLC1Q14978 699 aaKnown RBP eCLIP14.75□□□□□ -0.05
HMGN1-211ENST00000471260 UVSSAQ2YD98 709 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 PRSS55Q6UWB4 352 aaPredicted RBP14.75□□□□□ -0.05
HMGN1-211ENST00000471260 ANKS3Q6ZW76 656 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 HAUS6Q7Z4H7 955 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 GPBP1Q86WP2 473 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 RASSF8Q8NHQ8 419 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 RAD54LQ92698 747 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 NXPE3Q969Y0 559 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 ZNF707Q96C28 371 aaPredicted RBP14.75□□□□□ -0.05
HMGN1-211ENST00000471260 PIDD1Q9HB75 910 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 BLOC1S4Q9NUP1 217 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.75□□□□□ -0.05
HMGN1-211ENST00000471260 IGSF9Q9P2J2 1179 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 FBXW11Q9UKB1 542 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 BACE2Q9Y5Z0 518 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 PLXNA3P51805 1871 aa14.75□□□□□ -0.05
HMGN1-211ENST00000471260 TRIP11Q15643 1979 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 CLUHO75153 1309 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 RFPL2O75678 378 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 FAM13AO94988 1023 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 PIGRP01833 764 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 HNRNPA1P09651 372 aaKnown RBP eCLIP14.74□□□□□ -0.05
HMGN1-211ENST00000471260 SPATA31D3P0C874 917 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 PLCG1P19174 1290 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 SYT1P21579 422 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 NUBP1P53384 320 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 GRIN1Q05586 938 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 RAB33AQ14088 237 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 PTPAQ15257 358 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 LIN9Q5TKA1 542 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 SPATA31D4Q6ZUB0 917 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 GLYCTKQ8IVS8 523 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 MYCT1Q8N699 235 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 LARP4BQ92615 738 aaKnown RBP14.74□□□□□ -0.05
HMGN1-211ENST00000471260 ZBTB45Q96K62 511 aaPredicted RBP14.74□□□□□ -0.05
HMGN1-211ENST00000471260 ZMAT2Q96NC0 199 aaKnown RBP14.74□□□□□ -0.05
HMGN1-211ENST00000471260 TSPAN18Q96SJ8 248 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 REEP2Q9BRK0 252 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 ZSCAN16Q9H4T2 348 aaPredicted RBP14.74□□□□□ -0.05
HMGN1-211ENST00000471260 ANKFY1Q9P2R3 1169 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 EPS15L1Q9UBC2 864 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 MTRRQ9UBK8 725 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 SRPRBQ9Y5M8 271 aaKnown RBP14.74□□□□□ -0.05
HMGN1-211ENST00000471260 C2orf16Q68DN1 1984 aa14.74□□□□□ -0.05
HMGN1-211ENST00000471260 CITO14578 2027 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 NPHP3-ACAD11A0A0J9YXS1 232 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 PODXLO00592 558 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 SYN3O14994 580 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 POU2F2P09086 479 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 CLTAP09496 248 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 PDIA4P13667 645 aaKnown RBP14.73□□□□□ -0.05
HMGN1-211ENST00000471260 CACNB1Q02641 598 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-211ENST00000471260 SOX4Q06945 474 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-211ENST00000471260 RESTQ13127 1097 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 MCM6Q14566 821 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 KARSQ15046 597 aaKnown RBP14.73□□□□□ -0.05
HMGN1-211ENST00000471260 SLC10A6Q3KNW5 377 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 CD300LGQ6UXG3 332 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 FEZF2Q8TBJ5 459 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 BICD1Q96G01 975 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 KCNK12Q9HB15 430 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 GOLGA2P5Q9HBQ8 144 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 STK17AQ9UEE5 414 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 CCDC39Q9UFE4 941 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 TBX20Q9UMR3 447 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 CLIC4Q9Y696 253 aa14.73□□□□□ -0.05
HMGN1-211ENST00000471260 ZFP37Q9Y6Q3 630 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-211ENST00000471260 MUC6Q6W4X9 2439 aa14.72□□□□□ -0.05
HMGN1-211ENST00000471260 TBCAO75347 108 aaKnown RBP14.72□□□□□ -0.05
HMGN1-211ENST00000471260 KRT18P05783 430 aaKnown RBP14.72□□□□□ -0.05
HMGN1-211ENST00000471260 ASGR2P07307 311 aa14.72□□□□□ -0.05
HMGN1-211ENST00000471260 OR1D2P34982 312 aa14.72□□□□□ -0.05
HMGN1-211ENST00000471260 TXLNAP40222 546 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms