RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 TOM1L1O75674 476 aa22.05■■□□□ 1.12
COL2A1-203ENST00000465743 FAM13AO94988 1023 aa22.05■■□□□ 1.12
COL2A1-203ENST00000465743 KRT18P05783 430 aaKnown RBP22.05■■□□□ 1.12
COL2A1-203ENST00000465743 ATAT1Q5SQI0 421 aa22.05■■□□□ 1.12
COL2A1-203ENST00000465743 ALKAL1Q6UXT8 129 aa22.05■■□□□ 1.12
COL2A1-203ENST00000465743 HAUS6Q7Z4H7 955 aa22.05■■□□□ 1.12
COL2A1-203ENST00000465743 MYCT1Q8N699 235 aa22.05■■□□□ 1.12
COL2A1-203ENST00000465743 EDAQ92838 391 aa22.05■■□□□ 1.12
COL2A1-203ENST00000465743 TTPALQ9BTX7 342 aa22.05■■□□□ 1.12
COL2A1-203ENST00000465743 CCSER1Q9C0I3 900 aa22.05■■□□□ 1.12
COL2A1-203ENST00000465743 TOPORSQ9NS56 1045 aaPredicted RBP22.05■■□□□ 1.12
COL2A1-203ENST00000465743 DOCK8Q8NF50 2099 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 SPTLC2O15270 562 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 B3GAT3O94766 335 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 ASGR2P07307 311 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 BRCC3P46736 316 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 ZNF131P52739 623 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 ZXDAP98168 799 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 DNM1Q05193 864 aaKnown RBP22.04■■□□□ 1.12
COL2A1-203ENST00000465743 PSMD5Q16401 504 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 PTPN21Q16825 1174 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 XKR4Q5GH76 650 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 ZBTB41Q5SVQ8 909 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 TDRD5Q8NAT2 981 aaKnown RBP22.04■■□□□ 1.12
COL2A1-203ENST00000465743 KCNG4Q8TDN1 519 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 PIK3R5Q8WYR1 880 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 BICD1Q96G01 975 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 ACAP3Q96P50 834 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 FIZ1Q96SL8 496 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 CLSTN3Q9BQT9 956 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.04■■□□□ 1.12
COL2A1-203ENST00000465743 FNIP2Q9P278 1114 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 LARSQ9P2J5 1176 aaKnown RBP22.04■■□□□ 1.12
COL2A1-203ENST00000465743 NR2E1Q9Y466 385 aa22.04■■□□□ 1.12
COL2A1-203ENST00000465743 ANK1P16157 1881 aa22.03■■□□□ 1.12
COL2A1-203ENST00000465743 A0A087X0B3 334 aa22.03■■□□□ 1.12
COL2A1-203ENST00000465743 PPP6R2O75170 966 aa22.03■■□□□ 1.12
COL2A1-203ENST00000465743 TBCAO75347 108 aaKnown RBP22.03■■□□□ 1.12
COL2A1-203ENST00000465743 CXCL8P10145 99 aa22.03■■□□□ 1.12
COL2A1-203ENST00000465743 TKTP29401 623 aaKnown RBP22.03■■□□□ 1.12
COL2A1-203ENST00000465743 NMT1P30419 496 aaKnown RBP22.03■■□□□ 1.12
COL2A1-203ENST00000465743 DDIT3P35638 169 aa22.03■■□□□ 1.12
COL2A1-203ENST00000465743 TNFSF9P41273 254 aa22.03■■□□□ 1.12
COL2A1-203ENST00000465743 MATR3P43243 847 aaKnown RBP eCLIP22.03■■□□□ 1.12
COL2A1-203ENST00000465743 SPAG1Q07617 926 aa22.03■■□□□ 1.12
COL2A1-203ENST00000465743 UPP1Q16831 310 aa22.03■■□□□ 1.12
COL2A1-203ENST00000465743 ZPBP2Q6X784 338 aa22.03■■□□□ 1.12
COL2A1-203ENST00000465743 LNX1Q8TBB1 728 aaPredicted RBP22.03■■□□□ 1.12
COL2A1-203ENST00000465743 ZNF707Q96C28 371 aaPredicted RBP22.03■■□□□ 1.12
COL2A1-203ENST00000465743 PARVGQ9HBI0 331 aa22.03■■□□□ 1.12
COL2A1-203ENST00000465743 CNTN3Q9P232 1028 aa22.03■■□□□ 1.12
COL2A1-203ENST00000465743 TUBGCP4Q9UGJ1 667 aa22.03■■□□□ 1.12
COL2A1-203ENST00000465743 MUC6Q6W4X9 2439 aa22.03■■□□□ 1.12
COL2A1-203ENST00000465743 CCDC195A0A1B0GUA6 201 aa22.02■■□□□ 1.12
COL2A1-203ENST00000465743 TMEM189-UBE2V1I3L0A0 370 aa22.02■■□□□ 1.12
COL2A1-203ENST00000465743 PODXLO00592 558 aa22.02■■□□□ 1.12
COL2A1-203ENST00000465743 TXLNAP40222 546 aa22.02■■□□□ 1.12
COL2A1-203ENST00000465743 MCL1Q07820 350 aa22.02■■□□□ 1.12
COL2A1-203ENST00000465743 SLC10A6Q3KNW5 377 aa22.02■■□□□ 1.12
COL2A1-203ENST00000465743 TRIM67Q6ZTA4 783 aa22.02■■□□□ 1.12
COL2A1-203ENST00000465743 CCDC149Q6ZUS6 474 aa22.02■■□□□ 1.12
COL2A1-203ENST00000465743 IKZF4Q9H2S9 585 aa22.02■■□□□ 1.12
COL2A1-203ENST00000465743 TBX20Q9UMR3 447 aa22.02■■□□□ 1.12
COL2A1-203ENST00000465743 HCN4Q9Y3Q4 1203 aa22.02■■□□□ 1.12
COL2A1-203ENST00000465743 KMT2EQ8IZD2 1858 aa22.02■■□□□ 1.12
COL2A1-203ENST00000465743 TMEM221A6NGB7 291 aa22.01■■□□□ 1.11
COL2A1-203ENST00000465743 TISP43B9A030 160 aa22.01■■□□□ 1.11
COL2A1-203ENST00000465743 M0R296 226 aa22.01■■□□□ 1.11
COL2A1-203ENST00000465743 HNRNPDLO14979 420 aaKnown RBP22.01■■□□□ 1.11
COL2A1-203ENST00000465743 N4BP1O75113 896 aaKnown RBP22.01■■□□□ 1.11
COL2A1-203ENST00000465743 KCNE1P15382 129 aa22.01■■□□□ 1.11
COL2A1-203ENST00000465743 FGFR3P22607 806 aa22.01■■□□□ 1.11
COL2A1-203ENST00000465743 LIG4P49917 911 aa22.01■■□□□ 1.11
COL2A1-203ENST00000465743 KRT85P78386 507 aa22.01■■□□□ 1.11
COL2A1-203ENST00000465743 ZC2HC1CQ53FD0 456 aaPredicted RBP22.01■■□□□ 1.11
COL2A1-203ENST00000465743 SLC39A4Q6P5W5 647 aa22.01■■□□□ 1.11
COL2A1-203ENST00000465743 LILRA6Q6PI73 481 aa22.01■■□□□ 1.11
COL2A1-203ENST00000465743 RSPO2Q6UXX9 243 aaPredicted RBP22.01■■□□□ 1.11
COL2A1-203ENST00000465743 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.01■■□□□ 1.11
COL2A1-203ENST00000465743 DYMQ7RTS9 669 aa22.01■■□□□ 1.11
COL2A1-203ENST00000465743 KREMEN2Q8NCW0 462 aa22.01■■□□□ 1.11
COL2A1-203ENST00000465743 CMASQ8NFW8 434 aaPredicted RBP22.01■■□□□ 1.11
COL2A1-203ENST00000465743 DDX27Q96GQ7 796 aaKnown RBP22.01■■□□□ 1.11
COL2A1-203ENST00000465743 ZDBF2Q9HCK1 2354 aa22.01■■□□□ 1.11
COL2A1-203ENST00000465743 CLDN3O15551 220 aa22■■□□□ 1.11
COL2A1-203ENST00000465743 TRAK2O60296 914 aa22■■□□□ 1.11
COL2A1-203ENST00000465743 CREMQ03060 361 aa22■■□□□ 1.11
COL2A1-203ENST00000465743 DCLRE1AQ6PJP8 1040 aa22■■□□□ 1.11
COL2A1-203ENST00000465743 C15orf39Q6ZRI6 1047 aa22■■□□□ 1.11
COL2A1-203ENST00000465743 SFR1Q86XK3 245 aa22■■□□□ 1.11
COL2A1-203ENST00000465743 GPR65Q8IYL9 337 aa22■■□□□ 1.11
COL2A1-203ENST00000465743 SMG7Q92540 1137 aaKnown RBP22■■□□□ 1.11
COL2A1-203ENST00000465743 UROC1Q96N76 676 aa22■■□□□ 1.11
COL2A1-203ENST00000465743 PANK2Q9BZ23 570 aa22■■□□□ 1.11
COL2A1-203ENST00000465743 LIMD1Q9UGP4 676 aa22■■□□□ 1.11
COL2A1-203ENST00000465743 FBXW11Q9UKB1 542 aa22■■□□□ 1.11
COL2A1-203ENST00000465743 MYMKA6NI61 221 aa21.99■■□□□ 1.11
COL2A1-203ENST00000465743 FAM189A1O60320 539 aa21.99■■□□□ 1.11
COL2A1-203ENST00000465743 GUCY2FP51841 1108 aa21.99■■□□□ 1.11
COL2A1-203ENST00000465743 ELAVL2Q12926 359 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms