RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 MFAP3LO75121 409 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 FGBP02675 491 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 GTF2F1P35269 517 aaKnown RBP eCLIP18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 PSMD6Q15008 389 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 PTPN21Q16825 1174 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 ALKAL1Q6UXT8 129 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 ZNF365Q70YC5 407 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 INTS8Q75QN2 995 aaKnown RBP18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 TRIM59Q8IWR1 403 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 HACE1Q8IYU2 909 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 CRIPAKQ8N1N5 446 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 RNF169Q8NCN4 708 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 PARD3BQ8TEW8 1205 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 CCDC127Q96BQ5 260 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 FAM212AQ96EL1 285 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 CXCL16Q9H2A7 254 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 GOLGA6L9A6NEM1 432 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 LACTBL1A8MY62 500 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 RGS19P49795 217 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 VAMP7P51809 220 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 YARSP54577 528 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 ADKP55263 362 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 DLG4P78352 724 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 UBXN1Q04323 297 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 BFSP1Q12934 665 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 TMEM240Q5SV17 173 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 OTOP2Q7RTS6 562 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 TMC2Q8TDI7 906 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 PGBD4Q96DM1 585 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 POP1Q99575 1024 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 ELAC1Q9H777 363 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 PLEKHA5Q9HAU0 1116 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 TMEM161AQ9NX61 479 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 KLK14Q9P0G3 267 aa18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 RANBP2P49792 3224 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-203ENST00000465229 TTC3P53804 2025 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 TULP1O00294 542 aaPredicted RBP18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 GYPCP04921 128 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 ACTN1P12814 892 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 KRT13P13646 458 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 MTIF2P46199 727 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 XKR4Q5GH76 650 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 C1orf220Q5T0J3 134 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 IQCDQ96DY2 449 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 SNX27Q96L92 541 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 TUBGCP2Q9BSJ2 902 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 TOPORSQ9NS56 1045 aaPredicted RBP18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 TRMT1Q9NXH9 659 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 GIT1Q9Y2X7 761 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 UQCRHLA0A096LP55 91 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 EFCAB14O75071 495 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 BAIAP3O94812 1187 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 IL18RAPO95256 599 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 UQCRHP07919 91 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 DLATP10515 647 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 GOLGA8FQ08AF8 430 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 GOLGA8DPQ0D2H9 430 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 SLC35C1Q96A29 364 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 ZFP42Q96MM3 310 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 FNBP1Q96RU3 617 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 GAD1Q99259 594 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 ASB7Q9H672 318 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 RNF19AQ9NV58 838 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 PCDHB7Q9Y5E2 793 aa18.31■□□□□ 0.52
EXOSC3-203ENST00000465229 LAMA2P24043 3122 aaKnown RBP18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 LTBP2Q14767 1821 aa18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 ARL5CA6NH57 179 aa18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 LRRIQ3A6PVS8 624 aaPredicted RBP18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 TRIM49P0CI25 452 aa18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 TRIM49CP0CI26 452 aa18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 AFF1P51825 1210 aaKnown RBP18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 WDR5P61964 334 aaKnown RBP18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 CLDN10P78369 228 aa18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 PPP2R3AQ06190 1150 aa18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 ENPEPQ07075 957 aa18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 SURF1Q15526 300 aa18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 PSRC1Q6PGN9 363 aaPredicted RBP18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 CD302Q8IX05 232 aa18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 GSTCDQ8NEC7 633 aa18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 ZMAT2Q96NC0 199 aaKnown RBP18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 RSAD1Q9HA92 442 aa18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 UBN1Q9NPG3 1134 aa18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 CNTN3Q9P232 1028 aa18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.3■□□□□ 0.52
EXOSC3-203ENST00000465229 DYNC1I1O14576 645 aa18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 CASP14P31944 242 aa18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 MLH1P40692 756 aa18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 MAGEA10P43363 369 aaPredicted RBP18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 DEFB103AP81534 67 aa18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 DCAF17Q5H9S7 520 aaPredicted RBP18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 MIIPQ5JXC2 388 aa18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 TCERG1LQ5VWI1 586 aa18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 USP37Q86T82 979 aa18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 NPAS4Q8IUM7 802 aa18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 ZNF516Q92618 1163 aa18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 FAM84AQ96KN4 292 aa18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 NUP58Q9BVL2 599 aa18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 MIOSQ9NXC5 875 aa18.29■□□□□ 0.52
EXOSC3-203ENST00000465229 PDE4DIPQ5VU43 2346 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms