RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 LRP3O75074 770 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 N4BP1O75113 896 aaKnown RBP6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 RETP07949 1114 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 FDPSP14324 419 aaKnown RBP6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 UBA1P22314 1058 aaKnown RBP6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 GBP2P32456 591 aaPredicted RBP6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 MRPS6P82932 125 aaKnown RBP6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 GHRHRQ02643 423 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 BMS1Q14692 1282 aaKnown RBP6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 AGERQ15109 404 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 CSRP2Q16527 193 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 UBE2SQ16763 222 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 LINC01559Q495D7 138 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 SOWAHCQ53LP3 525 aaPredicted RBP6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 XP32Q5T750 250 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 IER5Q5VY09 327 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 LAIR1Q6GTX8 287 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 GALNT17Q6IS24 598 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 ALKBH2Q6NS38 261 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 PRR23CQ6ZRP0 262 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 LRRC55Q6ZSA7 311 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 CABP7Q86V35 215 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 VSIG10LQ86VR7 867 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 REXO1Q8N1G1 1221 aaKnown RBP6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 BICD2Q8TD16 824 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 GLG1Q92896 1179 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 NXPE3Q969Y0 559 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 AIFM3Q96NN9 605 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 NCAPGQ9BPX3 1015 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 ZMYND12Q9H0C1 365 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 SPG21Q9NZD8 308 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 PCDHA4Q9UN74 947 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 SMC3Q9UQE7 1217 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 MTF2Q9Y483 593 aaPredicted RBP6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 CEP83Q9Y592 693 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 BPTFQ12830 3046 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 DMXL2Q8TDJ6 3036 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 PATJQ8NI35 1801 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 ADAMTS20P59510 1910 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 MYH9P35579 1960 aaKnown RBP6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 KANSL1LA0AUZ9 987 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 TMEM8BA6NDV4 472 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 FAM170BA6NMN3 283 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 MEIS2O14770 477 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 BACH1O14867 736 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 BAG4O95429 457 aaKnown RBP6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 FOSP01100 380 aaPredicted RBP6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 FGFR1P11362 822 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 GJB2P29033 226 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 PPM1AP35813 382 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 PBX3P40426 434 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 MAPK8P45983 427 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 TMEM62Q0P6H9 643 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 PAK2Q13177 524 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 AP3B2Q13367 1082 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 SNW1Q13573 536 aaKnown RBP6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 MARCH8Q5T0T0 291 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 JAKMIP3Q5VZ66 844 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 SLC24A5Q71RS6 500 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 ZNF771Q7L3S4 317 aaPredicted RBP6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 CYFIP1Q7L576 1253 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 NOP9Q86U38 636 aaKnown RBP6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 CELF5Q8N6W0 485 aaKnown RBP6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 AUTS2Q8WXX7 1259 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 RNF34Q969K3 372 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 C8orf76Q96K31 380 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 ZNF558Q96NG5 402 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 ADAM2Q99965 735 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 PDCD2LQ9BRP1 358 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 TSPAN10Q9H1Z9 355 aaPredicted RBP6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 SLC2A4RGQ9NR83 387 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 RGS18Q9NS28 235 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 GJB4Q9NTQ9 266 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 STIM2Q9P246 746 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 ZNF215Q9UL58 517 aaPredicted RBP6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 PCDHA6Q9UN73 950 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 KCNJ14Q9UNX9 436 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 TELO2Q9Y4R8 837 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 PCDHA8Q9Y5H6 950 aa6.65□□□□□ -1.34
SMARCC1-204ENST00000462198 A0A1W2PRU2 124 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 C9IYK1 514 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 GOLGA6L22H0YM25 854 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 H3BQV1 296 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 M0QZ92 97 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 MGEA5O60502 916 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 KCNK5O95279 499 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 CCND2P30279 289 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 KRT2P35908 639 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 ZNF76P36508 570 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 GDF10P55107 478 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 GPC5P78333 572 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 NUCB2P80303 420 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 FAM189BP81408 668 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 GUCY1B3Q02153 619 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 PPFIA1Q13136 1202 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 CUL4AQ13619 759 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 GNL2Q13823 731 aaKnown RBP6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 UBXN2BQ14CS0 331 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 PGM5Q15124 567 aa6.64□□□□□ -1.35
SMARCC1-204ENST00000462198 SAFBQ15424 915 aaKnown RBP eCLIP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms