RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 USP17L6PQ6QN14 398 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 LCNL1Q6ZST4 164 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 HDXQ7Z353 690 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 TRAPPC11Q7Z392 1133 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 TMC7Q7Z402 723 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 FRMD5Q7Z6J6 570 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 FMNL3Q8IVF7 1028 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 ZFPM1Q8IX07 1006 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 ZC3H3Q8IXZ2 948 aaKnown RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 RNF10Q8N5U6 811 aaKnown RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 MSL3Q8N5Y2 521 aaKnown RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 SYT2Q8N9I0 419 aaPredicted RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 MSANTD4Q8NCY6 345 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 TRIM58Q8NG06 486 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 ETNPPLQ8TBG4 499 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 CAGE1Q8TC20 777 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 NEK9Q8TD19 979 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 LRRC15Q8TF66 581 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 FAM151AQ8WW52 585 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 RUBCNQ92622 972 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 DNAJC19Q96DA6 116 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 LIN37Q96GY3 246 aaPredicted RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 PSMD1Q99460 953 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 CHP1Q99653 195 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 PARD6BQ9BYG5 372 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 IFIH1Q9BYX4 1025 aaKnown RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 WDR11Q9BZH6 1224 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 MMRN2Q9H8L6 949 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 METTL14Q9HCE5 456 aaKnown RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 TUFT1Q9NNX1 390 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 SSU72Q9NP77 194 aaKnown RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 PRDM10Q9NQV6 1147 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 KCNQ5Q9NR82 932 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 AGPAT5Q9NUQ2 364 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 ZNF446Q9NWS9 450 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 KCND2Q9NZV8 630 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 CEP72Q9P209 647 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 RAB21Q9UL25 225 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 GUCA1BQ9UMX6 200 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 MRPL11Q9Y3B7 192 aaKnown RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 REXO2Q9Y3B8 237 aaKnown RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 DAAM1Q9Y4D1 1078 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 FHOD1Q9Y613 1164 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 SAR1BQ9Y6B6 198 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 UBE4BO95155 1302 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 MYH4Q9Y623 1939 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 TARSL2A2RTX5 802 aaKnown RBP4.43□□□□□ -1.7
PTPN12-208ENST00000447995 LRRC53A6NM62 1247 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 E9PMD0 336 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 GCOM1H8Y6P7 765 aaPredicted RBP4.43□□□□□ -1.7
PTPN12-208ENST00000447995 PDXKO00764 312 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 EIF3DO15371 548 aaKnown RBP eCLIP4.43□□□□□ -1.7
PTPN12-208ENST00000447995 SLC16A3O15427 465 aaKnown RBP4.43□□□□□ -1.7
PTPN12-208ENST00000447995 PJA2O43164 708 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 EDIL3O43854 480 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 EOMESO95936 686 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 SERPING1P05155 500 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 POLR2MP0CAP2 368 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 EPB41P11171 864 aaKnown RBP4.43□□□□□ -1.7
PTPN12-208ENST00000447995 XRCC5P13010 732 aaKnown RBP4.43□□□□□ -1.7
PTPN12-208ENST00000447995 PRLRP16471 622 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 ZSCAN20P17040 1043 aaPredicted RBP4.43□□□□□ -1.7
PTPN12-208ENST00000447995 TCP1P17987 556 aaKnown RBP4.43□□□□□ -1.7
PTPN12-208ENST00000447995 CFPP27918 469 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 EIF4A3P38919 411 aaKnown RBP4.43□□□□□ -1.7
PTPN12-208ENST00000447995 PAFAH1B1P43034 410 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 MAGEA1P43355 309 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 KIF11P52732 1056 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 CACNB3P54284 484 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 HERVK_113P62684 666 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 ITIH3Q06033 890 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 DSC3Q14574 896 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 TNIP1Q15025 636 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 SLC15A2Q16348 729 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 ASIC2Q16515 512 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 NFIL3Q16649 462 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 LONRF2Q1L5Z9 754 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 BMT2Q1RMZ1 405 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 USH1GQ495M9 461 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 PPM1JQ5JR12 505 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 C10orf76Q5T2E6 689 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 WDR93Q6P2C0 686 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 RRAGAQ7L523 313 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 KRT26Q7Z3Y9 468 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 KCNK18Q7Z418 384 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 FAM83AQ86UY5 434 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 VPS36Q86VN1 386 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 TRIM59Q8IWR1 403 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 SAMD3Q8N6K7 520 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 TTLL6Q8N841 843 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 GOLGA5Q8TBA6 731 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 CRYGNQ8WXF5 182 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 HPS3Q969F9 1004 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 DMRTB1Q96MA1 342 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 TOX2Q96NM4 488 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 NOX5Q96PH1 765 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 RBCK1Q9BYM8 510 aa4.43□□□□□ -1.7
PTPN12-208ENST00000447995 TDRD3Q9H7E2 651 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms