RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ANAPC5Q9UJX4 755 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 TBX20Q9UMR3 447 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.35■□□□□ 0.85
SDCBP-204ENST00000447182 UBIAD1Q9Y5Z9 338 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 ASTN2O75129 1339 aaPredicted RBP20.35■□□□□ 0.85
SDCBP-204ENST00000447182 MROH7Q68CQ1 1323 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 POTEJP0CG39 1038 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 MYBL1P10243 752 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 BRAFP15056 766 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 GCNT1Q02742 428 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 ENPEPQ07075 957 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 TKFCQ3LXA3 575 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 ARHGEF18Q6ZSZ5 1173 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 SEPT12Q8IYM1 358 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 ATG4AQ8WYN0 398 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 CCDC127Q96BQ5 260 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 DDX27Q96GQ7 796 aaKnown RBP20.35■□□□□ 0.85
SDCBP-204ENST00000447182 MAGEB18Q96M61 343 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 KCNK9Q9NPC2 374 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 COL20A1Q9P218 1284 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 CDH16O75309 829 aa20.34■□□□□ 0.85
SDCBP-204ENST00000447182 SCP2P22307 547 aa20.34■□□□□ 0.85
SDCBP-204ENST00000447182 CNGA1P29973 690 aa20.34■□□□□ 0.85
SDCBP-204ENST00000447182 KCNJ2P63252 427 aa20.34■□□□□ 0.85
SDCBP-204ENST00000447182 SPP2Q13103 211 aa20.34■□□□□ 0.85
SDCBP-204ENST00000447182 USP37Q86T82 979 aa20.34■□□□□ 0.85
SDCBP-204ENST00000447182 BBOF1Q8ND07 529 aa20.34■□□□□ 0.85
SDCBP-204ENST00000447182 TMEM161BQ8NDZ6 487 aa20.34■□□□□ 0.85
SDCBP-204ENST00000447182 TRIM11Q96F44 468 aa20.34■□□□□ 0.85
SDCBP-204ENST00000447182 HERPUD2Q9BSE4 406 aa20.34■□□□□ 0.85
SDCBP-204ENST00000447182 GPRC5CQ9NQ84 441 aa20.34■□□□□ 0.85
SDCBP-204ENST00000447182 RGPD3A6NKT7 1758 aaPredicted RBP20.34■□□□□ 0.85
SDCBP-204ENST00000447182 RGPD4Q7Z3J3 1758 aa20.34■□□□□ 0.85
SDCBP-204ENST00000447182 KIF1CO43896 1103 aaKnown RBP20.33■□□□□ 0.85
SDCBP-204ENST00000447182 ICAM1P05362 532 aa20.33■□□□□ 0.85
SDCBP-204ENST00000447182 GHRHRQ02643 423 aa20.33■□□□□ 0.85
SDCBP-204ENST00000447182 KLF1Q13351 362 aaPredicted RBP20.33■□□□□ 0.85
SDCBP-204ENST00000447182 LLGL1Q15334 1064 aa20.33■□□□□ 0.85
SDCBP-204ENST00000447182 ANKRD42Q8N9B4 389 aa20.33■□□□□ 0.85
SDCBP-204ENST00000447182 IL31RAQ8NI17 732 aa20.33■□□□□ 0.85
SDCBP-204ENST00000447182 DHX38Q92620 1227 aaKnown RBP20.33■□□□□ 0.85
SDCBP-204ENST00000447182 TBC1D31Q96DN5 1066 aa20.33■□□□□ 0.85
SDCBP-204ENST00000447182 FAM212AQ96EL1 285 aa20.33■□□□□ 0.85
SDCBP-204ENST00000447182 SAAL1Q96ER3 474 aa20.33■□□□□ 0.85
SDCBP-204ENST00000447182 IFT74Q96LB3 600 aa20.33■□□□□ 0.85
SDCBP-204ENST00000447182 ARHGEF3Q9NR81 526 aa20.33■□□□□ 0.85
SDCBP-204ENST00000447182 TBC1D22BQ9NU19 505 aa20.33■□□□□ 0.85
SDCBP-204ENST00000447182 EURLQ9NYK6 297 aa20.33■□□□□ 0.85
SDCBP-204ENST00000447182 DONSONQ9NYP3 566 aa20.33■□□□□ 0.85
SDCBP-204ENST00000447182 ZC3H11AO75152 810 aaKnown RBP eCLIP20.33■□□□□ 0.84
SDCBP-204ENST00000447182 ADCY8P40145 1251 aa20.33■□□□□ 0.84
SDCBP-204ENST00000447182 ALDH5A1P51649 535 aaPredicted RBP20.33■□□□□ 0.84
SDCBP-204ENST00000447182 MKRN4PQ13434 485 aaPredicted RBP20.33■□□□□ 0.84
SDCBP-204ENST00000447182 STAT4Q14765 748 aa20.33■□□□□ 0.84
SDCBP-204ENST00000447182 PCNX4Q63HM2 1172 aa20.33■□□□□ 0.84
SDCBP-204ENST00000447182 RNF43Q68DV7 783 aa20.33■□□□□ 0.84
SDCBP-204ENST00000447182 PPP1R21Q6ZMI0 780 aa20.33■□□□□ 0.84
SDCBP-204ENST00000447182 ZNF677Q86XU0 584 aa20.33■□□□□ 0.84
SDCBP-204ENST00000447182 GRAMD1AQ96CP6 724 aa20.33■□□□□ 0.84
SDCBP-204ENST00000447182 L3MBTL3Q96JM7 780 aaPredicted RBP20.33■□□□□ 0.84
SDCBP-204ENST00000447182 TGS1Q96RS0 853 aaKnown RBP20.33■□□□□ 0.84
SDCBP-204ENST00000447182 FBXO28Q9NVF7 368 aa20.33■□□□□ 0.84
SDCBP-204ENST00000447182 IGF2BP3O00425 579 aaKnown RBP eCLIP20.32■□□□□ 0.84
SDCBP-204ENST00000447182 GH1P01241 217 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 HMGB2P26583 209 aaKnown RBP20.32■□□□□ 0.84
SDCBP-204ENST00000447182 SKIV2L2P42285 1042 aaKnown RBP20.32■□□□□ 0.84
SDCBP-204ENST00000447182 PTGER2P43116 358 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 ACVR2BQ13705 512 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 CCNG2Q16589 344 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 SV2AQ7L0J3 742 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 ASRGL1Q7L266 308 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 CYP4X1Q8N118 509 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 FITM2Q8N6M3 262 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 CCDC89Q8N998 374 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 ZNF622Q969S3 477 aaKnown RBP eCLIP20.32■□□□□ 0.84
SDCBP-204ENST00000447182 KLHL29Q96CT2 875 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 TOPORSQ9NS56 1045 aaPredicted RBP20.32■□□□□ 0.84
SDCBP-204ENST00000447182 ANKEF1Q9NU02 776 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 GGT7Q9UJ14 662 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 NAALADL1Q9UQQ1 740 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 MYPNQ86TC9 1320 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 STX2P32856 288 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 CYP24A1Q07973 514 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 CCDC15Q0P6D6 951 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 STRN3Q13033 797 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 MTFR1Q15390 333 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 TRIP13Q15645 432 aaPredicted RBP20.32■□□□□ 0.84
SDCBP-204ENST00000447182 UGCGQ16739 394 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 ACCSLQ4AC99 568 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 RIBC1Q8N443 379 aaPredicted RBP20.32■□□□□ 0.84
SDCBP-204ENST00000447182 STAMBPL1Q96FJ0 436 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 CCDC77Q9BR77 488 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 FOXP3Q9BZS1 431 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 TRIM7Q9C029 511 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 TMOD2Q9NZR1 351 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 CCPG1Q9ULG6 757 aa20.32■□□□□ 0.84
SDCBP-204ENST00000447182 R3HDM2Q9Y2K5 976 aaKnown RBP20.32■□□□□ 0.84
SDCBP-204ENST00000447182 ABHD2P08910 425 aa20.31■□□□□ 0.84
SDCBP-204ENST00000447182 CETPP11597 493 aa20.31■□□□□ 0.84
SDCBP-204ENST00000447182 NPTX2P47972 431 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms