RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 C11orf63Q6NUN7 778 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 PADI6Q6TGC4 694 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 PALM2Q8IXS6 379 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 ZDHHC14Q8IZN3 488 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 XXYLT1Q8NBI6 393 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 HIPK4Q8NE63 616 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 RNF217Q8TC41 542 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 SEC14L1Q92503 715 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 FAM161BQ96MY7 647 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 RILPQ96NA2 401 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 PCDHB18PQ96TA0 734 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 LXNQ9BS40 222 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 CYP39A1Q9NYL5 469 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 MYH1P12882 1939 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 MYH4Q9Y623 1939 aa9.62□□□□□ -0.87
COPB1-202ENST00000439561 F5H6K3 240 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 MAP3K7O43318 606 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 ZSCAN5DPP0CG00 497 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 KRT10P13645 584 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 TNNI1P19237 187 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 RRM1P23921 792 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 RANBP1P43487 201 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 ARSEP51690 589 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 BBS9Q3SYG4 887 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 RNF220Q5VTB9 566 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 DCUN1D2Q6PH85 259 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 ZNF720Q7Z2F6 126 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 TXLNGYQ9BZA5 131 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 C12orf65Q9H3J6 166 aaKnown RBP9.61□□□□□ -0.87
COPB1-202ENST00000439561 DDX4Q9NQI0 724 aaKnown RBP9.61□□□□□ -0.87
COPB1-202ENST00000439561 NEU2Q9Y3R4 380 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 C2CD2Q9Y426 696 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 MYH3P11055 1940 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 ARHGAP42A6NI28 874 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 ZBED4O75132 1171 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 CIB2O75838 187 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 KITP10721 976 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 KRT4P19013 534 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 POLD1P28340 1107 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 MAN1A1P33908 653 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 LIN9Q5TKA1 542 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 TEX9Q8N6V9 391 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 BBOF1Q8ND07 529 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.61□□□□□ -0.87
COPB1-202ENST00000439561 POMGNT1Q8WZA1 660 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 GINM1Q9NU53 330 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 RAB20Q9NX57 234 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 WHRNQ9P202 907 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 R3HDM2Q9Y2K5 976 aaKnown RBP9.61□□□□□ -0.87
COPB1-202ENST00000439561 KRT1P04264 644 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 ATP2B4P23634 1241 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 RPA3P35244 121 aaPredicted RBP9.61□□□□□ -0.87
COPB1-202ENST00000439561 PEX5P50542 639 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 RHBDL3P58872 404 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 NFIAQ12857 509 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 HYIQ5T013 277 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 TRAPPC3LQ5T215 181 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 SYDE2Q5VT97 1194 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 SNX30Q5VWJ9 437 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 ARMC3Q5W041 872 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 FOXR2Q6PJQ5 311 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 CPXCR1Q8N123 301 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 ACCSQ96QU6 501 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 FNBP1Q96RU3 617 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 DDX50Q9BQ39 737 aaKnown RBP9.61□□□□□ -0.87
COPB1-202ENST00000439561 TOPORSQ9NS56 1045 aaPredicted RBP9.61□□□□□ -0.87
COPB1-202ENST00000439561 C1orf112Q9NSG2 853 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 LRRC4BQ9NT99 713 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 HSPBP1Q9NZL4 362 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 HEY2Q9UBP5 337 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 NARFQ9UHQ1 456 aa9.61□□□□□ -0.87
COPB1-202ENST00000439561 ATP9AO75110 1047 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 GJB6O95452 261 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 ABL2P42684 1182 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 ARFIP2P53365 341 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 WDR44Q5JSH3 913 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 MFSD5Q6N075 450 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 EPS8L1Q8TE68 723 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 PYROXD1Q8WU10 500 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 MKNK1Q9BUB5 465 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 KIFC3Q9BVG8 833 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 TRIM55Q9BYV6 548 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 CHKBQ9Y259 395 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 PCDHA3Q9Y5H8 950 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 STK24Q9Y6E0 443 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 hCG_2014768A0A024R1R8 64 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 KRT36O76013 467 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 CETPP11597 493 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 CYP11B1P15538 503 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 PRELPP51888 382 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 IRX4P78413 519 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 NBPF20Q3BBV1 942 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 PCNX4Q63HM2 1172 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 CBWD2Q8IUF1 395 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 UCMAQ8WVF2 138 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 TEKT1Q969V4 418 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 TEKT3Q9BXF9 490 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 OSBPL8Q9BZF1 889 aa9.6□□□□□ -0.87
COPB1-202ENST00000439561 DENND2DQ9H6A0 471 aaPredicted RBP9.6□□□□□ -0.87
COPB1-202ENST00000439561 EHMT1Q9H9B1 1298 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms