RNA–Protein interactions for RNA: ENST00000427737.5

TUBA4A-205, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-205ENST00000427737 MTMR3Q13615 1198 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 MCM6Q14566 821 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 NOLC1Q14978 699 aaKnown RBP eCLIP13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 PTPAQ15257 358 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 UPP1Q16831 310 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 SEZ6Q53EL9 994 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 SPECC1Q5M775 1068 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 IER5LQ5T953 404 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 FAM173BQ6P4H8 233 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 FBXL6Q8N531 539 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 HDAC7Q8WUI4 952 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 RAD54LQ92698 747 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 PBXIP1Q96AQ6 731 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 ZNF707Q96C28 371 aaPredicted RBP13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 UROC1Q96N76 676 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 ACAP3Q96P50 834 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 CLSTN3Q9BQT9 956 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 SMOC2Q9H3U7 446 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 PLEKHA4Q9H4M7 779 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 CNTN3Q9P232 1028 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 KCNG1Q9UIX4 513 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 VWA8A3KMH1 1905 aa13.66□□□□□ -0.22
TUBA4A-205ENST00000427737 I3L4J1 428 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 K7ELQ4 463 aaPredicted RBP13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 ADAM12O43184 909 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 N4BP1O75113 896 aaKnown RBP13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 C1RP00736 705 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 MARCKSP29966 332 aaPredicted RBP13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 ZNF131P52739 623 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 DCLRE1AQ6PJP8 1040 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 CD300LGQ6UXG3 332 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 ZPBP2Q6X784 338 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 USP49Q70CQ1 688 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 OTOP3Q7RTS5 596 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 HAUS6Q7Z4H7 955 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 SMG7Q92540 1137 aaKnown RBP13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 LARP4BQ92615 738 aaKnown RBP13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 ACSF2Q96CM8 615 aaPredicted RBP13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 INTS4Q96HW7 963 aaKnown RBP13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 EPSTI1Q96J88 318 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 RHOBTB2Q9BYZ6 727 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 HAPLN2Q9GZV7 340 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 WDR6Q9NNW5 1121 aaKnown RBP13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 SLC38A7Q9NVC3 462 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 ZDHHC7Q9NXF8 308 aa13.65□□□□□ -0.22
TUBA4A-205ENST00000427737 CLUHO75153 1309 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 VPS13AQ96RL7 3174 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 H0YCG3 227 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 K7ENM7 598 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 PODXLO00592 558 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 CLDN3O15551 220 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 FAM13AO94988 1023 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 PAPLNO95428 1278 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 KCNE1P15382 129 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 FGFR3P22607 806 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 TKTP29401 623 aaKnown RBP13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 BRCC3P46736 316 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 CEBPZQ03701 1054 aaKnown RBP13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 MCL1Q07820 350 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 PDXDC1Q6P996 788 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 CYP26C1Q6V0L0 522 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 UBALD2Q8IYN6 164 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 MYCT1Q8N699 235 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 C18orf25Q96B23 403 aaPredicted RBP13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 BICD1Q96G01 975 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 DDX27Q96GQ7 796 aaKnown RBP13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 CCSER1Q9C0I3 900 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 IRF2BPLQ9H1B7 796 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 PARVGQ9HBI0 331 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 FBXO2Q9UK22 296 aaPredicted RBP13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 FBXW11Q9UKB1 542 aa13.64□□□□□ -0.23
TUBA4A-205ENST00000427737 DMDP11532 3685 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 CITO14578 2027 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 RIF1Q5UIP0 2472 aaKnown RBP13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 MTCL1Q9Y4B5 1905 aaKnown RBP13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 HNRNPDLO14979 420 aaKnown RBP13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 TRAPPC3O43617 180 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 GFRA3O60609 400 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 TBCAO75347 108 aaKnown RBP13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 ZMYND10O75800 440 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 PDGFBP01127 241 aaPredicted RBP13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 KRT18P05783 430 aaKnown RBP13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 CXCL8P10145 99 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 MATR3P43243 847 aaKnown RBP eCLIP13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 SLC10A6Q3KNW5 377 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 STAMQ92783 540 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 KCNN1Q92952 543 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 CLIC6Q96NY7 704 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 PRKD2Q9BZL6 878 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 ZHX3Q9H4I2 956 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 PIDD1Q9HB75 910 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 MTRRQ9UBK8 725 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 TBX20Q9UMR3 447 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 MTMR6Q9Y217 621 aa13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 SRPRBQ9Y5M8 271 aaKnown RBP13.63□□□□□ -0.23
TUBA4A-205ENST00000427737 PDCD11Q14690 1871 aaKnown RBP13.62□□□□□ -0.23
TUBA4A-205ENST00000427737 TRAK2O60296 914 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms