RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 PCDHB2Q9Y5E7 798 aa7.72□□□□□ -1.17
CHCHD3P1-201ENST00000425516 TTC3P53804 2025 aa7.72□□□□□ -1.17
CHCHD3P1-201ENST00000425516 MICAL3Q7RTP6 2002 aa7.72□□□□□ -1.17
CHCHD3P1-201ENST00000425516 COL4A6Q14031 1691 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 HNRNPDLO14979 420 aaKnown RBP7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 OGTO15294 1046 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 INPPL1O15357 1258 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CLDN3O15551 220 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 DGKIO75912 1065 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 GJB5O95377 273 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ADH1CP00326 375 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 MCF2P10911 925 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SKIP12755 728 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TIMP2P16035 220 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 LIG4P49917 911 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 RAB27AP51159 221 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 AFF1P51825 1210 aaKnown RBP7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 NLRP12P59046 1061 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 HTRA4P83105 476 aaPredicted RBP7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 NFIL3Q16649 462 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 DCAF4L1Q3SXM0 396 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ZNF568Q3ZCX4 644 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 XKR4Q5GH76 650 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CLLU1OSQ5K130 101 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 FAM109BQ6ICB4 259 aaPredicted RBP7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SLFN12LQ6IEE8 588 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 FOXR2Q6PJQ5 311 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ALKAL1Q6UXT8 129 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TMCO2Q7Z6W1 182 aaPredicted RBP7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 BPHLQ86WA6 291 aaPredicted RBP7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 NPAS4Q8IUM7 802 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SLC9A9Q8IVB4 645 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ZC3H3Q8IXZ2 948 aaKnown RBP7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TMEM192Q8IY95 271 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ZSWIM2Q8NEG5 633 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 BICD1Q96G01 975 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 RNPC3Q96LT9 517 aaKnown RBP7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 FBXL18Q96ME1 805 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ADPGKQ9BRR6 497 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CBWD1Q9BRT8 395 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CXCL16Q9H2A7 254 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 NXF3Q9H4D5 531 aaKnown RBP7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ZFAND3Q9H8U3 227 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TYW1Q9NV66 732 aaKnown RBP7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CGNQ9P2M7 1197 aaKnown RBP7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 HES2Q9Y543 173 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SLC4A7Q9Y6M7 1214 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PTPRSQ13332 1948 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CHD9Q3L8U1 2897 aa7.71□□□□□ -1.18
CHCHD3P1-201ENST00000425516 A0A1W2PPC1 479 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ZBBXA8MT70 800 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CLIC2O15247 247 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 GPR37L1O60883 481 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 OFD1O75665 1012 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 UPP2O95045 317 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 KIF20AO95235 890 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 AMHP03971 560 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CLTAP09496 248 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 STAG3L1P0CL83 205 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 FGFR1P11362 822 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ATP2A2P16615 1042 aaKnown RBP7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 AKAP5P24588 427 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CCNE1P24864 410 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PPP1R2P41236 205 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TNFSF9P41273 254 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 KCNJ6P48051 423 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PMS1P54277 932 aaKnown RBP7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 MCCD1P59942 119 aaPredicted RBP7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 POU5F1Q01860 360 aaKnown RBP7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 MYBPC2Q14324 1141 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 NOLC1Q14978 699 aaKnown RBP eCLIP7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SLC10A6Q3KNW5 377 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SEZ6Q53EL9 994 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ZBTB41Q5SVQ8 909 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ANKRD40Q6AI12 368 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TTI2Q6NXR4 508 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ZBTB33Q86T24 672 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 HERC6Q8IVU3 1022 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TDHQ8IZJ6 230 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SYCP3Q8IZU3 236 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 MLKLQ8NB16 471 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 GSTCDQ8NEC7 633 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 POMGNT1Q8WZA1 660 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 LPPQ93052 612 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PGBD4Q96DM1 585 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 DHTKD1Q96HY7 919 aaPredicted RBP7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CASD1Q96PB1 797 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SLC9A7Q96T83 725 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 RAD9AQ99638 391 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 DUSP9Q99956 384 aaKnown RBP7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 TCHPQ9BT92 498 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 FUCA2Q9BTY2 467 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 MTIF3Q9H2K0 278 aaKnown RBP7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 PCIF1Q9H4Z3 704 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 UBN1Q9NPG3 1134 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 MIOSQ9NXC5 875 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 SNTG2Q9NY99 539 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 ANKFY1Q9P2R3 1169 aa7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 CPSF3Q9UKF6 684 aaKnown RBP7.7□□□□□ -1.18
CHCHD3P1-201ENST00000425516 AGO2Q9UKV8 859 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms