RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 MYCT1Q8N699 235 aa27.33■■□□□ 1.97
HLA-C-204ENST00000415537 DDX27Q96GQ7 796 aaKnown RBP27.33■■□□□ 1.97
HLA-C-204ENST00000415537 SNX27Q96L92 541 aa27.33■■□□□ 1.97
HLA-C-204ENST00000415537 CLSTN3Q9BQT9 956 aa27.33■■□□□ 1.97
HLA-C-204ENST00000415537 KCNH6Q9H252 994 aa27.33■■□□□ 1.97
HLA-C-204ENST00000415537 BLOC1S4Q9NUP1 217 aa27.33■■□□□ 1.97
HLA-C-204ENST00000415537 ZDHHC7Q9NXF8 308 aa27.33■■□□□ 1.97
HLA-C-204ENST00000415537 CLIC4Q9Y696 253 aa27.33■■□□□ 1.97
HLA-C-204ENST00000415537 ABLIM1O14639 778 aa27.32■■□□□ 1.96
HLA-C-204ENST00000415537 ASGR2P07307 311 aa27.32■■□□□ 1.96
HLA-C-204ENST00000415537 NCKAP1LP55160 1127 aa27.32■■□□□ 1.96
HLA-C-204ENST00000415537 MCM6Q14566 821 aa27.32■■□□□ 1.96
HLA-C-204ENST00000415537 HAUS6Q7Z4H7 955 aa27.32■■□□□ 1.96
HLA-C-204ENST00000415537 RAD54LQ92698 747 aa27.32■■□□□ 1.96
HLA-C-204ENST00000415537 WDR6Q9NNW5 1121 aaKnown RBP27.32■■□□□ 1.96
HLA-C-204ENST00000415537 FBXL6Q8N531 539 aa27.31■■□□□ 1.96
HLA-C-204ENST00000415537 LARP4BQ92615 738 aaKnown RBP27.31■■□□□ 1.96
HLA-C-204ENST00000415537 ASIC4Q96FT7 647 aa27.31■■□□□ 1.96
HLA-C-204ENST00000415537 CCSER1Q9C0I3 900 aa27.31■■□□□ 1.96
HLA-C-204ENST00000415537 ZHX3Q9H4I2 956 aa27.31■■□□□ 1.96
HLA-C-204ENST00000415537 PARVGQ9HBI0 331 aa27.31■■□□□ 1.96
HLA-C-204ENST00000415537 FOXD4L1Q9NU39 408 aa27.31■■□□□ 1.96
HLA-C-204ENST00000415537 CNTN3Q9P232 1028 aa27.31■■□□□ 1.96
HLA-C-204ENST00000415537 K7ELQ4 463 aaPredicted RBP27.3■■□□□ 1.96
HLA-C-204ENST00000415537 KCNE1P15382 129 aa27.3■■□□□ 1.96
HLA-C-204ENST00000415537 SCP2P22307 547 aa27.3■■□□□ 1.96
HLA-C-204ENST00000415537 FGFR3P22607 806 aa27.3■■□□□ 1.96
HLA-C-204ENST00000415537 MARCKSP29966 332 aaPredicted RBP27.3■■□□□ 1.96
HLA-C-204ENST00000415537 SOX4Q06945 474 aaPredicted RBP27.3■■□□□ 1.96
HLA-C-204ENST00000415537 LIN9Q5TKA1 542 aa27.3■■□□□ 1.96
HLA-C-204ENST00000415537 LRRC15Q8TF66 581 aa27.3■■□□□ 1.96
HLA-C-204ENST00000415537 ZMAT2Q96NC0 199 aaKnown RBP27.3■■□□□ 1.96
HLA-C-204ENST00000415537 PRKD2Q9BZL6 878 aa27.3■■□□□ 1.96
HLA-C-204ENST00000415537 CCDC39Q9UFE4 941 aa27.3■■□□□ 1.96
HLA-C-204ENST00000415537 CLUHO75153 1309 aa27.3■■□□□ 1.96
HLA-C-204ENST00000415537 PDCD11Q14690 1871 aaKnown RBP27.3■■□□□ 1.96
HLA-C-204ENST00000415537 K7ENM7 598 aa27.29■■□□□ 1.96
HLA-C-204ENST00000415537 PODXLO00592 558 aa27.29■■□□□ 1.96
HLA-C-204ENST00000415537 TBCAO75347 108 aaKnown RBP27.29■■□□□ 1.96
HLA-C-204ENST00000415537 ZMYND10O75800 440 aa27.29■■□□□ 1.96
HLA-C-204ENST00000415537 GBP2P32456 591 aaPredicted RBP27.29■■□□□ 1.96
HLA-C-204ENST00000415537 DDIT3P35638 169 aa27.29■■□□□ 1.96
HLA-C-204ENST00000415537 LIG4P49917 911 aa27.29■■□□□ 1.96
HLA-C-204ENST00000415537 MCL1Q07820 350 aa27.29■■□□□ 1.96
HLA-C-204ENST00000415537 RESTQ13127 1097 aa27.29■■□□□ 1.96
HLA-C-204ENST00000415537 PTPAQ15257 358 aa27.29■■□□□ 1.96
HLA-C-204ENST00000415537 SEZ6Q53EL9 994 aa27.29■■□□□ 1.96
HLA-C-204ENST00000415537 SPECC1Q5M775 1068 aa27.29■■□□□ 1.96
HLA-C-204ENST00000415537 ZNF707Q96C28 371 aaPredicted RBP27.29■■□□□ 1.96
HLA-C-204ENST00000415537 FBXW11Q9UKB1 542 aa27.29■■□□□ 1.96
HLA-C-204ENST00000415537 TRAK2O60296 914 aa27.28■■□□□ 1.96
HLA-C-204ENST00000415537 RPL9P32969 192 aaKnown RBP27.28■■□□□ 1.96
HLA-C-204ENST00000415537 BRCC3P46736 316 aa27.28■■□□□ 1.96
HLA-C-204ENST00000415537 CEBPZQ03701 1054 aaKnown RBP27.28■■□□□ 1.96
HLA-C-204ENST00000415537 ANKS3Q6ZW76 656 aa27.28■■□□□ 1.96
HLA-C-204ENST00000415537 C3orf58Q8NDZ4 430 aa27.28■■□□□ 1.96
HLA-C-204ENST00000415537 EPSTI1Q96J88 318 aa27.28■■□□□ 1.96
HLA-C-204ENST00000415537 TBX20Q9UMR3 447 aa27.28■■□□□ 1.96
HLA-C-204ENST00000415537 NUB1Q9Y5A7 615 aa27.28■■□□□ 1.96
HLA-C-204ENST00000415537 SRPRBQ9Y5M8 271 aaKnown RBP27.28■■□□□ 1.96
HLA-C-204ENST00000415537 HNRNPDLO14979 420 aaKnown RBP27.27■■□□□ 1.96
HLA-C-204ENST00000415537 PAPLNO95428 1278 aa27.27■■□□□ 1.96
HLA-C-204ENST00000415537 IGFBP6P24592 240 aaPredicted RBP27.27■■□□□ 1.96
HLA-C-204ENST00000415537 TKTP29401 623 aaKnown RBP27.27■■□□□ 1.96
HLA-C-204ENST00000415537 ABCD1P33897 745 aa27.27■■□□□ 1.96
HLA-C-204ENST00000415537 OR1D2P34982 312 aa27.27■■□□□ 1.96
HLA-C-204ENST00000415537 TXLNAP40222 546 aa27.27■■□□□ 1.96
HLA-C-204ENST00000415537 ZNF131P52739 623 aa27.27■■□□□ 1.96
HLA-C-204ENST00000415537 SLC10A6Q3KNW5 377 aa27.27■■□□□ 1.96
HLA-C-204ENST00000415537 PPM1LQ5SGD2 360 aa27.27■■□□□ 1.96
HLA-C-204ENST00000415537 FAM173BQ6P4H8 233 aa27.27■■□□□ 1.96
HLA-C-204ENST00000415537 CD300LGQ6UXG3 332 aa27.27■■□□□ 1.96
HLA-C-204ENST00000415537 KCNN1Q92952 543 aa27.27■■□□□ 1.96
HLA-C-204ENST00000415537 C18orf25Q96B23 403 aaPredicted RBP27.27■■□□□ 1.96
HLA-C-204ENST00000415537 MTRRQ9UBK8 725 aa27.27■■□□□ 1.96
HLA-C-204ENST00000415537 I3L4J1 428 aa27.26■■□□□ 1.95
HLA-C-204ENST00000415537 RAB33AQ14088 237 aa27.26■■□□□ 1.95
HLA-C-204ENST00000415537 KYAT1Q16773 422 aa27.26■■□□□ 1.95
HLA-C-204ENST00000415537 KRI1Q8N9T8 703 aaKnown RBP27.26■■□□□ 1.95
HLA-C-204ENST00000415537 ZSCAN16Q9H4T2 348 aaPredicted RBP27.26■■□□□ 1.95
HLA-C-204ENST00000415537 PLEKHA5Q9HAU0 1116 aa27.26■■□□□ 1.95
HLA-C-204ENST00000415537 KCNK12Q9HB15 430 aa27.26■■□□□ 1.95
HLA-C-204ENST00000415537 FBXO2Q9UK22 296 aaPredicted RBP27.26■■□□□ 1.95
HLA-C-204ENST00000415537 CDY1Q9Y6F8 540 aa27.26■■□□□ 1.95
HLA-C-204ENST00000415537 ZNF318Q5VUA4 2279 aa27.26■■□□□ 1.95
HLA-C-204ENST00000415537 ADAM12O43184 909 aa27.25■■□□□ 1.95
HLA-C-204ENST00000415537 STX6O43752 255 aa27.25■■□□□ 1.95
HLA-C-204ENST00000415537 C8AP07357 584 aa27.25■■□□□ 1.95
HLA-C-204ENST00000415537 CLTAP09496 248 aa27.25■■□□□ 1.95
HLA-C-204ENST00000415537 HNRNPA1P09651 372 aaKnown RBP eCLIP27.25■■□□□ 1.95
HLA-C-204ENST00000415537 CXCL8P10145 99 aa27.25■■□□□ 1.95
HLA-C-204ENST00000415537 TDGQ13569 410 aa27.25■■□□□ 1.95
HLA-C-204ENST00000415537 USP49Q70CQ1 688 aa27.25■■□□□ 1.95
HLA-C-204ENST00000415537 SMOC2Q9H3U7 446 aa27.25■■□□□ 1.95
HLA-C-204ENST00000415537 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.25■■□□□ 1.95
HLA-C-204ENST00000415537 IGSF9Q9P2J2 1179 aa27.25■■□□□ 1.95
HLA-C-204ENST00000415537 STK17AQ9UEE5 414 aa27.25■■□□□ 1.95
HLA-C-204ENST00000415537 MTMR6Q9Y217 621 aa27.25■■□□□ 1.95
HLA-C-204ENST00000415537 BACE2Q9Y5Z0 518 aa27.25■■□□□ 1.95
HLA-C-204ENST00000415537 N4BP1O75113 896 aaKnown RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms