RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ONECUT3O60422 494 aaPredicted RBP14.06□□□□□ -0.16
NFKB1-202ENST00000394820 ZBTB7AO95365 584 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 ZSCAN5DPP0CG00 497 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 RARAP10276 462 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 ATXN3P54252 364 aaPredicted RBP14.06□□□□□ -0.16
NFKB1-202ENST00000394820 P3H1Q32P28 736 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 PPP4R3CPQ6ZMV5 832 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 IL31RAQ8NI17 732 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 ATP8B4Q8TF62 1192 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 AKT1S1Q96B36 256 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 TSC22D3Q99576 134 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 GANQ9H2C0 597 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 KAT6AQ92794 2004 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 KRT1P04264 644 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 TROVE2P10155 538 aaKnown RBP eCLIP14.06□□□□□ -0.16
NFKB1-202ENST00000394820 COILP38432 576 aaPredicted RBP14.06□□□□□ -0.16
NFKB1-202ENST00000394820 STRN3Q13033 797 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 RSBN1LQ6PCB5 846 aaPredicted RBP14.06□□□□□ -0.16
NFKB1-202ENST00000394820 TMEM270Q6UE05 265 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 ARHGEF19Q8IW93 802 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 RAB3IPQ96QF0 476 aaPredicted RBP14.06□□□□□ -0.16
NFKB1-202ENST00000394820 NACC1Q96RE7 527 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 IMPG2Q9BZV3 1241 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 SLC13A1Q9BZW2 595 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 DONSONQ9NYP3 566 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 ARL2BPQ9Y2Y0 163 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 UBTFL6P0CB48 400 aaPredicted RBP14.05□□□□□ -0.16
NFKB1-202ENST00000394820 ZCCHC18P0CG32 403 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 RALAP11233 206 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 DPEP1P16444 411 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 PIK3CAP42336 1068 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 MFAP3P55082 362 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 COPS2P61201 443 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 KDSRQ06136 332 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 RASA3Q14644 834 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 THEMIS2Q5TEJ8 643 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 OTOP1Q7RTM1 612 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 MSL3Q8N5Y2 521 aaKnown RBP14.05□□□□□ -0.16
NFKB1-202ENST00000394820 ARMC2Q8NEN0 867 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 AGR3Q8TD06 166 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 GMCL1Q96IK5 515 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 GBP5Q96PP8 586 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 MKNK1Q9BUB5 465 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 WRAP73Q9P2S5 460 aaPredicted RBP14.05□□□□□ -0.16
NFKB1-202ENST00000394820 DDX60LQ5H9U9 1706 aaKnown RBP14.05□□□□□ -0.16
NFKB1-202ENST00000394820 PLIN4Q96Q06 1357 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 ENTPD3O75355 529 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 AGTP01019 485 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 RXRBP28702 533 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 HNRNPH3P31942 346 aaKnown RBP14.05□□□□□ -0.16
NFKB1-202ENST00000394820 HOXD13P35453 343 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 CHKAP35790 457 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 NOVP48745 357 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 SPIRE1Q08AE8 756 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 PDIA2Q13087 525 aaKnown RBP14.05□□□□□ -0.16
NFKB1-202ENST00000394820 PPP2R5EQ16537 467 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 SMTNL2Q2TAL5 461 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 LIN9Q5TKA1 542 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 CBWD2Q8IUF1 395 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 SCFD2Q8WU76 684 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 RSAD2Q8WXG1 361 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 CALR3Q96L12 384 aaKnown RBP14.05□□□□□ -0.16
NFKB1-202ENST00000394820 NXF1Q9UBU9 619 aaKnown RBP14.05□□□□□ -0.16
NFKB1-202ENST00000394820 GYG2O15488 501 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 BANF1O75531 89 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 SAT1P21673 171 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 FNTAP49354 379 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 SEMA3FQ13275 785 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 PREPLQ4J6C6 727 aaPredicted RBP14.05□□□□□ -0.16
NFKB1-202ENST00000394820 SWT1Q5T5J6 900 aaKnown RBP14.05□□□□□ -0.16
NFKB1-202ENST00000394820 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.05□□□□□ -0.16
NFKB1-202ENST00000394820 RAB20Q9NX57 234 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 ZFP69BQ9UJL9 534 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 AGAP1Q9UPQ3 857 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 PCDHA2Q9Y5H9 948 aa14.05□□□□□ -0.16
NFKB1-202ENST00000394820 CPP00450 1065 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 ACOT2P49753 483 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 EPHB1P54762 984 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 ITIH3Q06033 890 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 SAMD7Q7Z3H4 446 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 SLC13A5Q86YT5 568 aaPredicted RBP14.04□□□□□ -0.16
NFKB1-202ENST00000394820 AGPAT3Q9NRZ7 376 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 ASTN1O14525 1302 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 SPP2Q13103 211 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 CDO1Q16878 200 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 EDRF1Q3B7T1 1238 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 ERMARDQ5T6L9 678 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 EEPD1Q7L9B9 569 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 ZBTB33Q86T24 672 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 PRELID2Q8N945 189 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 XXYLT1Q8NBI6 393 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 SPDYE1Q8NFV5 336 aaPredicted RBP14.04□□□□□ -0.16
NFKB1-202ENST00000394820 KCNH7Q9NS40 1196 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 ADAM22Q9P0K1 906 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 VAV3Q9UKW4 847 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 RIPK2O43353 540 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 ENTPD5O75356 428 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 TMEM253P0C7T8 217 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 ESRRAP11474 423 aaPredicted RBP14.04□□□□□ -0.16
NFKB1-202ENST00000394820 EPHB2P29323 1055 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms