RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ATP8B1O43520 1251 aa15.58■□□□□ 0.08
NDC1-201ENST00000371429 CHRNA3P32297 505 aa15.58■□□□□ 0.08
NDC1-201ENST00000371429 GNL1P36915 607 aaPredicted RBP15.58■□□□□ 0.08
NDC1-201ENST00000371429 NNTQ13423 1086 aa15.58■□□□□ 0.08
NDC1-201ENST00000371429 ZSCAN26Q16670 478 aa15.58■□□□□ 0.08
NDC1-201ENST00000371429 NFRKBQ6P4R8 1299 aa15.58■□□□□ 0.08
NDC1-201ENST00000371429 MMS22LQ6ZRQ5 1243 aa15.58■□□□□ 0.08
NDC1-201ENST00000371429 SUDS3Q9H7L9 328 aaPredicted RBP15.58■□□□□ 0.08
NDC1-201ENST00000371429 B3GAT3O94766 335 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 KIZQ2M2Z5 673 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 USP50Q70EL3 339 aaPredicted RBP15.57■□□□□ 0.08
NDC1-201ENST00000371429 SPATS2Q86XZ4 545 aaKnown RBP15.57■□□□□ 0.08
NDC1-201ENST00000371429 PKNOX2Q96KN3 472 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.57■□□□□ 0.082e-7■■□□□ 13.3
NDC1-201ENST00000371429 DDX47Q9H0S4 455 aaKnown RBP15.57■□□□□ 0.08
NDC1-201ENST00000371429 CNOT10Q9H9A5 744 aaKnown RBP15.57■□□□□ 0.08
NDC1-201ENST00000371429 PACSIN2Q9UNF0 486 aaPredicted RBP15.57■□□□□ 0.08
NDC1-201ENST00000371429 FER1L4A9Z1Z3 1794 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 KLRC1P26715 233 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 SHMT1P34896 483 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 SLC1A1P43005 524 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 CCDC38Q502W7 563 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 ALS2CLQ60I27 953 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 TAS2R42Q7RTR8 314 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 SYTL5Q8TDW5 730 aaPredicted RBP15.57■□□□□ 0.08
NDC1-201ENST00000371429 OSBPL9Q96SU4 736 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 VPS11Q9H270 941 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 SH3BP1Q9Y3L3 701 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 PCDHB2Q9Y5E7 798 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 SLIT1O75093 1534 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 PI4K2BG5E9Z4 385 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 STRNO43815 780 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 OCRLQ01968 901 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 FMR1Q06787 632 aaKnown RBP eCLIP15.57■□□□□ 0.08
NDC1-201ENST00000371429 PXMP2Q9NR77 195 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 ATG16L1Q676U5 607 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 PGBD3Q8N328 593 aa15.57■□□□□ 0.08
NDC1-201ENST00000371429 MAP3K7O43318 606 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 KRT14P02533 472 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 SLC26A2P50443 739 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 GLRA4Q5JXX5 417 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 TTC8Q8TAM2 541 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 VCX3AQ9NNX9 186 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 HSPA4LO95757 839 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 ACADSBP45954 432 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 PPM1NQ8N819 430 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 UVRAGQ9P2Y5 699 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 PPME1Q9Y570 386 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 TMEM131LA2VDJ0 1609 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 OGTO15294 1046 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 ITGB3P05106 788 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 DNERQ8NFT8 737 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 DPF3Q92784 378 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 GPRC5CQ9NQ84 441 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.56■□□□□ 0.08
NDC1-201ENST00000371429 NAGPAQ9UK23 515 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 UBA6A0AVT1 1052 aaPredicted RBP15.56■□□□□ 0.08
NDC1-201ENST00000371429 GTF2A1P52655 376 aaPredicted RBP15.56■□□□□ 0.08
NDC1-201ENST00000371429 DEUP1Q05D60 604 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 PCNX4Q63HM2 1172 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 C1orf54Q8WWF1 131 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 ULK4Q96C45 1275 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 SENP7Q9BQF6 1050 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 HAUS8Q9BT25 410 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 IDI2Q9BXS1 227 aa15.56■□□□□ 0.08
NDC1-201ENST00000371429 H3BRB1 525 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 GRAP2O75791 330 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 RPLP2P05387 115 aaKnown RBP15.55■□□□□ 0.08
NDC1-201ENST00000371429 SLC9A1P19634 815 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 CASP7P55210 303 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 METTL7BQ6UX53 244 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 CDCA5Q96FF9 252 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 TUT1Q9H6E5 874 aaKnown RBP15.55■□□□□ 0.08
NDC1-201ENST00000371429 KCNQ5Q9NR82 932 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 ATP11BQ9Y2G3 1177 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 NKRFO15226 690 aaKnown RBP eCLIP15.55■□□□□ 0.08
NDC1-201ENST00000371429 ZNF189O75820 626 aaPredicted RBP15.55■□□□□ 0.08
NDC1-201ENST00000371429 EIF3EP60228 445 aaKnown RBP15.55■□□□□ 0.08
NDC1-201ENST00000371429 POU5F1BQ06416 359 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 SLC18A3Q16572 532 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 KLHL38Q2WGJ6 581 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 CCDC137Q6PK04 289 aaKnown RBP15.55■□□□□ 0.08
NDC1-201ENST00000371429 TTC17Q96AE7 1141 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 P2RX7Q99572 595 aaKnown RBP15.55■□□□□ 0.08
NDC1-201ENST00000371429 RUSC1Q9BVN2 902 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 HOXA2O43364 376 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 KPNA6O60684 536 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 SEC23AQ15436 765 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 MAPRE1Q15691 268 aaKnown RBP15.55■□□□□ 0.08
NDC1-201ENST00000371429 APOBEC3HQ6NTF7 200 aaKnown RBP15.55■□□□□ 0.08
NDC1-201ENST00000371429 ASAP3Q8TDY4 903 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 SEPT8Q92599 483 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 ABI2Q9NYB9 513 aaPredicted RBP15.55■□□□□ 0.08
NDC1-201ENST00000371429 FHOD1Q9Y613 1164 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 IRF1P10914 325 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 NCF2P19878 526 aaPredicted RBP15.55■□□□□ 0.08
NDC1-201ENST00000371429 YY1P25490 414 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 CCDC144BQ3MJ40 725 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 PI4K2AQ9BTU6 479 aa15.55■□□□□ 0.08
NDC1-201ENST00000371429 P4HA2O15460 535 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms