RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 GPD1LQ8N335 351 aa20.36■□□□□ 0.85
CDHR4-201ENST00000343366 URGCPQ8TCY9 931 aa20.36■□□□□ 0.85
CDHR4-201ENST00000343366 LMAN2LQ9H0V9 348 aa20.36■□□□□ 0.85
CDHR4-201ENST00000343366 ANO10Q9NW15 660 aa20.36■□□□□ 0.85
CDHR4-201ENST00000343366 USP20Q9Y2K6 914 aa20.36■□□□□ 0.85
CDHR4-201ENST00000343366 VPS13AQ96RL7 3174 aa20.36■□□□□ 0.85
CDHR4-201ENST00000343366 SPTBN4Q9H254 2564 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 EXTL3O43909 919 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 UPP2O95045 317 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 RB1P06400 928 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 ATF7P17544 494 aaPredicted RBP20.35■□□□□ 0.85
CDHR4-201ENST00000343366 CCNE1P24864 410 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 ADSSP30520 456 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 CAMK1Q14012 370 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 ISM2Q6H9L7 571 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 AGMOQ6ZNB7 445 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 THNSL1Q8IYQ7 743 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 CMTR2Q8IYT2 770 aaKnown RBP20.35■□□□□ 0.85
CDHR4-201ENST00000343366 XXYLT1Q8NBI6 393 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 RNF169Q8NCN4 708 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 EDAQ92838 391 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 CLP1Q92989 425 aaKnown RBP20.35■□□□□ 0.85
CDHR4-201ENST00000343366 ZNF689Q96CS4 500 aaPredicted RBP20.35■□□□□ 0.85
CDHR4-201ENST00000343366 RPS6KC1Q96S38 1066 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 NXF3Q9H4D5 531 aaKnown RBP20.35■□□□□ 0.85
CDHR4-201ENST00000343366 RPF1Q9H9Y2 349 aaKnown RBP20.35■□□□□ 0.85
CDHR4-201ENST00000343366 PARP2Q9UGN5 583 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 MAPK8IP1Q9UQF2 711 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 DMDP11532 3685 aa20.35■□□□□ 0.85
CDHR4-201ENST00000343366 DCHS1Q96JQ0 3298 aa20.34■□□□□ 0.85
CDHR4-201ENST00000343366 MAPK13O15264 365 aa20.34■□□□□ 0.85
CDHR4-201ENST00000343366 GRM6O15303 877 aa20.34■□□□□ 0.85
CDHR4-201ENST00000343366 FGFR1OPO95684 399 aaKnown RBP20.34■□□□□ 0.85
CDHR4-201ENST00000343366 BMP6P22004 513 aa20.34■□□□□ 0.85
CDHR4-201ENST00000343366 FKBP3Q00688 224 aaKnown RBP20.34■□□□□ 0.85
CDHR4-201ENST00000343366 PAK1Q13153 545 aa20.34■□□□□ 0.85
CDHR4-201ENST00000343366 SMAD4Q13485 552 aaKnown RBP20.34■□□□□ 0.85
CDHR4-201ENST00000343366 SURF1Q15526 300 aa20.34■□□□□ 0.85
CDHR4-201ENST00000343366 USP37Q86T82 979 aa20.34■□□□□ 0.85
CDHR4-201ENST00000343366 SMYD4Q8IYR2 804 aaPredicted RBP20.34■□□□□ 0.85
CDHR4-201ENST00000343366 P2RX5Q93086 422 aa20.34■□□□□ 0.85
CDHR4-201ENST00000343366 MSLNLQ96KJ4 702 aa20.34■□□□□ 0.85
CDHR4-201ENST00000343366 POP1Q99575 1024 aaKnown RBP20.34■□□□□ 0.85
CDHR4-201ENST00000343366 SNTG2Q9NY99 539 aa20.34■□□□□ 0.85
CDHR4-201ENST00000343366 HSPBP1Q9NZL4 362 aa20.34■□□□□ 0.85
CDHR4-201ENST00000343366 CPSF3Q9UKF6 684 aaKnown RBP20.34■□□□□ 0.85
CDHR4-201ENST00000343366 FRMD4BQ9Y2L6 1034 aa20.34■□□□□ 0.85
CDHR4-201ENST00000343366 RWDD3Q9Y3V2 267 aa20.34■□□□□ 0.85
CDHR4-201ENST00000343366 FNDC1Q4ZHG4 1894 aaPredicted RBP20.34■□□□□ 0.85
CDHR4-201ENST00000343366 ZFHX2Q9C0A1 2572 aaPredicted RBP20.33■□□□□ 0.85
CDHR4-201ENST00000343366 ZNF233A6NK53 670 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 PPP1R3GB7ZBB8 358 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 FAM189A1O60320 539 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 RECQL4O94761 1208 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 IL18RAPO95256 599 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 HARSP12081 509 aaKnown RBP20.33■□□□□ 0.85
CDHR4-201ENST00000343366 ERCC5P28715 1186 aaPredicted RBP20.33■□□□□ 0.85
CDHR4-201ENST00000343366 BMPR1AP36894 532 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 STX1AQ16623 288 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 ZCWPW2Q504Y3 356 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 NOMO2Q5JPE7 1267 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 IER5LQ5T953 404 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 NT5DC4Q86YG4 428 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 LRRC43Q8N309 656 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 CBWD1Q9BRT8 395 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 HAPLN2Q9GZV7 340 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 ASB7Q9H672 318 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 DMAC2Q9NW81 257 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 RWDD2AQ9UIY3 292 aa20.33■□□□□ 0.85
CDHR4-201ENST00000343366 CETN3O15182 167 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 XPOTO43592 962 aaKnown RBP20.32■□□□□ 0.84
CDHR4-201ENST00000343366 EXOC3O60645 756 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 OFD1O75665 1012 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 NR3C1P04150 777 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 ADRB2P07550 413 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 CCDC192P0DO97 292 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 GTF2F1P35269 517 aaKnown RBP eCLIP20.32■□□□□ 0.84
CDHR4-201ENST00000343366 PPP2R3AQ06190 1150 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 ENPEPQ07075 957 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 TCF15Q12870 199 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 XKR4Q5GH76 650 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 MKNK1Q9BUB5 465 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 NAT10Q9H0A0 1025 aaKnown RBP20.32■□□□□ 0.84
CDHR4-201ENST00000343366 SLC38A7Q9NVC3 462 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 DERAQ9Y315 318 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 HES2Q9Y543 173 aa20.32■□□□□ 0.84
CDHR4-201ENST00000343366 TDRD15B5MCY1 1934 aaKnown RBP20.31■□□□□ 0.84
CDHR4-201ENST00000343366 PLXNA3P51805 1871 aa20.31■□□□□ 0.84
CDHR4-201ENST00000343366 ARL5CA6NH57 179 aa20.31■□□□□ 0.84
CDHR4-201ENST00000343366 CLIC2O15247 247 aa20.31■□□□□ 0.84
CDHR4-201ENST00000343366 LINC01565O15544 149 aa20.31■□□□□ 0.84
CDHR4-201ENST00000343366 THP07101 528 aa20.31■□□□□ 0.84
CDHR4-201ENST00000343366 NR2F2P24468 414 aa20.31■□□□□ 0.84
CDHR4-201ENST00000343366 AKAP5P24588 427 aa20.31■□□□□ 0.84
CDHR4-201ENST00000343366 CTNNB1P35222 781 aa20.31■□□□□ 0.84
CDHR4-201ENST00000343366 GRIK3Q13003 919 aa20.31■□□□□ 0.84
CDHR4-201ENST00000343366 ADAM9Q13443 819 aa20.31■□□□□ 0.84
CDHR4-201ENST00000343366 ADAM15Q13444 863 aa20.31■□□□□ 0.84
CDHR4-201ENST00000343366 BTG3Q14201 252 aaPredicted RBP20.31■□□□□ 0.84
CDHR4-201ENST00000343366 CLUL1Q15846 466 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms