RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 GNASQ5JWF2 1037 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 MED15Q96RN5 788 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 SPATC1LQ9H0A9 340 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 UBN1Q9NPG3 1134 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 TTI1O43156 1089 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 IRX4P78413 519 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 MMS22LQ6ZRQ5 1243 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 SYDE1Q6ZW31 735 aaPredicted RBP13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 NIPA1Q7RTP0 329 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 KRT38O76015 456 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PGK2P07205 417 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 GUCY2CP25092 1073 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 KIAA1755Q5JYT7 1200 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 SPOPLQ6IQ16 392 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 MCUQ8NE86 351 aa13.58□□□□□ -0.24
SH3PXD2A-201ENST00000315994 ATRNO75882 1429 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 GTF2H1P32780 548 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PSMD6Q15008 389 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 KLC3Q6P597 504 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 RPAINQ86UA6 219 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 C1orf54Q8WWF1 131 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 VPS39Q96JC1 886 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 FAM198AQ9UFP1 575 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 TTC7AQ9ULT0 858 aaPredicted RBP13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 TOM1L1O75674 476 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 SULT1E1P49888 294 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 NLRP11P59045 1033 aaKnown RBP13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 VEPH1Q14D04 833 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 ATG16L1Q676U5 607 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 TTI2Q6NXR4 508 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 ZFPM1Q8IX07 1006 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.57□□□□□ -0.248e-8■■□□□ 12.3
SH3PXD2A-201ENST00000315994 MKL1Q969V6 931 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 INTUQ9ULD6 942 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 A0A087WUV0 522 aaPredicted RBP13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 NPTXRO95502 500 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 GARTP22102 1010 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 GRIK1P39086 918 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 NPTX2P47972 431 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 AP1B1Q10567 949 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 TAF1BQ53T94 588 aaPredicted RBP13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PTF1AQ7RTS3 328 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 ATP6V1E2Q96A05 226 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 GPRC5CQ9NQ84 441 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 FOXP2O15409 715 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PNPLA4P41247 253 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 STX1BP61266 288 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 ICE2Q659A1 982 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 FBXO16Q8IX29 292 aaPredicted RBP13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 ATL2Q8NHH9 583 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 GDAP1Q8TB36 358 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 IFT43Q96FT9 208 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PPME1Q9Y570 386 aa13.57□□□□□ -0.24
SH3PXD2A-201ENST00000315994 WTIPA6NIX2 430 aaPredicted RBP13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PPP1R12AO14974 1030 aaPredicted RBP13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 CYP2C19P33261 490 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 MMEL1Q495T6 779 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 CRY2Q49AN0 593 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 IRX2Q9BZI1 471 aaPredicted RBP13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 ESYT3A0FGR9 886 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 GOLGA8MH3BSY2 632 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 OGTO15294 1046 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 HERVK_113P62684 666 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 EARS2Q5JPH6 523 aaKnown RBP13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 METTL7BQ6UX53 244 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 RNF180Q86T96 592 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 SRRM1Q8IYB3 904 aaKnown RBP13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 GSPT2Q8IYD1 628 aaKnown RBP13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 SEMA6BQ9H3T3 888 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PIDD1Q9HB75 910 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 TADA2AO75478 443 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PDGFRAP16234 1089 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 SERPINB6P35237 376 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 ACADSBP45954 432 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 KRT17Q04695 432 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 RNF219Q5W0B1 726 aaPredicted RBP13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 ZNF720Q7Z2F6 126 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 CD302Q8IX05 232 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PARD3BQ8TEW8 1205 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 FNDC3AQ9Y2H6 1198 aaKnown RBP13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 ZBTB22O15209 634 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 TGFB3P10600 412 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 IFT88Q13099 833 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 IZUMO3Q5VZ72 239 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 TADA2BQ86TJ2 420 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 MCEEQ96PE7 176 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 EPAS1Q99814 870 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 LTN1O94822 1766 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 NKRFO15226 690 aaKnown RBP eCLIP13.56□□□□□ -0.241e-6■□□□□ 9.7
SH3PXD2A-201ENST00000315994 MOCS2O96007 188 aaPredicted RBP13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 MAPTP10636 758 aaKnown RBP13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PAPOLAP51003 745 aaKnown RBP13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 CENPPQ6IPU0 288 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.56□□□□□ -0.242e-7■■■■■ 64.2
SH3PXD2A-201ENST00000315994 DNAJC7Q99615 494 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 MAGEB5Q9BZ81 275 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 RANBP17Q9H2T7 1088 aaKnown RBP13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 PLEKHA5Q9HAU0 1116 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 OLFML3Q9NRN5 406 aa13.56□□□□□ -0.24
SH3PXD2A-201ENST00000315994 COPEO14579 308 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms