RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 GINS2Q9Y248 185 aa15.21■□□□□ 0.03
CSNK1D-202ENST00000314028 INHBAP08476 426 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 YWHABP31946 246 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 MMP13P45452 471 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 ITIH4Q14624 930 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 AOC3Q16853 763 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 ATP13A4Q4VNC1 1196 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 DNAJC24Q6P3W2 148 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 RHPN2Q8IUC4 686 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 ATP6V0A4Q9HBG4 840 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 MCM8Q9UJA3 840 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 TBX3O15119 743 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 ASAP2O43150 1006 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 MT-ND3P03897 115 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 ETS1P14921 441 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 ITIH2P19823 946 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 HOXA7P31268 230 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 DDR1Q08345 913 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 CDO1Q16878 200 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 AP1ARQ63HQ0 302 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 OTOP1Q7RTM1 612 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 RMDN2Q96LZ7 410 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 PPP1R16BQ96T49 567 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 PCDHB18PQ96TA0 734 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 WDR18Q9BV38 432 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 ZNF341Q9BYN7 854 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 SLC13A1Q9BZW2 595 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 TUFT1Q9NNX1 390 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 PCDHA2Q9Y5H9 948 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 CHD4Q14839 1912 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 CES2O00748 559 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 KIF1CO43896 1103 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 BANF1O75531 89 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 P4HBP07237 508 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 VCAM1P19320 739 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 EPHB2P29323 1055 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 CNGA1P29973 690 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 POLGP54098 1239 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 RRP1BQ14684 758 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 CC2D2BQ6DHV5 1058 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 LVRNQ6Q4G3 990 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 EPS8L1Q8TE68 723 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 CFAP36Q96G28 342 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 MKNK1Q9BUB5 465 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 OLFML3Q9NRN5 406 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 KCNH7Q9NS40 1196 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 TMEM59LQ9UK28 342 aa15.2■□□□□ 0.02
CSNK1D-202ENST00000314028 EIF3DO15371 548 aaKnown RBP eCLIP15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 CCND1P24385 295 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 GSCP56915 257 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 NCALDP61601 193 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 TFAMQ00059 246 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 SATB1Q01826 763 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 CFAP157Q5JU67 520 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 EEPD1Q7L9B9 569 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 ARMC2Q8NEN0 867 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 TSC22D3Q99576 134 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 POLR3CQ9BUI4 534 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 VCXQ9H320 206 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 C12orf65Q9H3J6 166 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 RPTORQ8N122 1335 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 H7C0C1 242 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 I3L4J1 428 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 LUC7L3O95232 432 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 KRT4P19013 534 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 GNA15P30679 374 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 MAN1A1P33908 653 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 ATP5OP48047 213 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 XRCC4Q13426 336 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 FAM43BQ6ZT52 329 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 CENPUQ71F23 418 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 RFX6Q8HWS3 928 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 C3orf20Q8ND61 904 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 CCDC110Q8TBZ0 833 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 HSPH1Q92598 858 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 PPARGC1AQ9UBK2 798 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 GTF3C4Q9UKN8 822 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 G3BP2Q9UN86 482 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 CIB2O75838 187 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 DNAJC8O75937 253 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 MMP10P09238 476 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 MYH3P11055 1940 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 ANXA13P27216 316 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 KCNT1Q5JUK3 1230 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 ANKRD20A2Q5SQ80 823 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 ANKRD20A1Q5TYW2 823 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 C6orf89Q6UWU4 347 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 C1orf186Q6ZWK4 172 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 LARGE2Q8N3Y3 721 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 RASGEF1CQ8N431 466 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 FITM2Q8N6M3 262 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 BBOF1Q8ND07 529 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 DLGAP2Q9P1A6 1054 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 NYAP2Q9P242 653 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 SAE1Q9UBE0 346 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 ZHX2Q9Y6X8 837 aa15.19■□□□□ 0.02
CSNK1D-202ENST00000314028 KDSRQ06136 332 aa15.18■□□□□ 0.02
CSNK1D-202ENST00000314028 RHOT1Q8IXI2 618 aa15.18■□□□□ 0.02
CSNK1D-202ENST00000314028 FAM161BQ96MY7 647 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms