RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 BSNDQ8WZ55 320 aa19.99■□□□□ 0.79
CPSF3-201ENST00000238112 TRIM11Q96F44 468 aa19.99■□□□□ 0.79
CPSF3-201ENST00000238112 CEP170P1Q96L14 293 aa19.99■□□□□ 0.79
CPSF3-201ENST00000238112 CHST7Q9NS84 486 aa19.99■□□□□ 0.79
CPSF3-201ENST00000238112 ZC3H11AO75152 810 aaKnown RBP eCLIP19.98■□□□□ 0.79
CPSF3-201ENST00000238112 DNAJC8O75937 253 aaPredicted RBP19.98■□□□□ 0.79
CPSF3-201ENST00000238112 CALCAP01258 141 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 MYBL1P10243 752 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 SF3A3Q12874 501 aaKnown RBP eCLIP19.98■□□□□ 0.791e-7■■■□□ 16.1
CPSF3-201ENST00000238112 XRCC4Q13426 336 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 SNCBQ16143 134 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 MCOLN2Q8IZK6 566 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 IPO4Q8TEX9 1081 aaKnown RBP19.98■□□□□ 0.79
CPSF3-201ENST00000238112 ATG4AQ8WYN0 398 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 BICD1Q96G01 975 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 SERPINB12Q96P63 405 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 PDCD2LQ9BRP1 358 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 C17orf75Q9HAS0 396 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 CD248Q9HCU0 757 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 AVENQ9NQS1 362 aaPredicted RBP19.98■□□□□ 0.79
CPSF3-201ENST00000238112 PXMP2Q9NR77 195 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 AAASQ9NRG9 546 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 GOLGB1Q14789 3259 aaKnown RBP19.98■□□□□ 0.79
CPSF3-201ENST00000238112 UNGP13051 313 aaPredicted RBP19.98■□□□□ 0.79
CPSF3-201ENST00000238112 PTK6Q13882 451 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 ZNF568Q3ZCX4 644 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 CCDC50Q8IVM0 306 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 ARHGEF2Q92974 986 aaKnown RBP19.98■□□□□ 0.79
CPSF3-201ENST00000238112 FAM213AQ9BRX8 229 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 NTPCRQ9BSD7 190 aaKnown RBP19.98■□□□□ 0.79
CPSF3-201ENST00000238112 MOV10L1Q9BXT6 1211 aaKnown RBP19.98■□□□□ 0.79
CPSF3-201ENST00000238112 A1CFQ9NQ94 594 aaKnown RBP19.98■□□□□ 0.79
CPSF3-201ENST00000238112 PCDHA10Q9Y5I2 948 aa19.98■□□□□ 0.79
CPSF3-201ENST00000238112 MROH7Q68CQ1 1323 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 ATF2P15336 505 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 RRM1P23921 792 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 CHKAP35790 457 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 SOX10P56693 466 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 RHBDF2Q6PJF5 856 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 NLRX1Q86UT6 975 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 RDM1Q8NG50 284 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 CPA5Q8WXQ8 436 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 TRIM7Q9C029 511 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 TP73O15350 636 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 NSFP46459 744 aaKnown RBP19.97■□□□□ 0.79
CPSF3-201ENST00000238112 CAV1Q03135 178 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 TRIP13Q15645 432 aaPredicted RBP19.97■□□□□ 0.79
CPSF3-201ENST00000238112 ZNF677Q86XU0 584 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 DCLK3Q9C098 648 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 MTFR1LQ9H019 292 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 PCDHB2Q9Y5E7 798 aa19.97■□□□□ 0.79
CPSF3-201ENST00000238112 GARTP22102 1010 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 ITGA8P53708 1063 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 WDR44Q5JSH3 913 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 PHLDB2Q86SQ0 1253 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 MGARPQ8TDB4 240 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 YY1AP1Q9H869 796 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 GABBR1Q9UBS5 961 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 THAP12O43422 761 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 TTC4O95801 387 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 GSTA1P08263 222 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 ADCY8P40145 1251 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 MAP3K10Q02779 954 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 BRDTQ58F21 947 aaPredicted RBP19.96■□□□□ 0.79
CPSF3-201ENST00000238112 ATP6V0A1Q93050 837 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 SCLT1Q96NL6 688 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 TRAIPQ9BWF2 469 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 KIAA1683Q9H0B3 1180 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 ANAPC5Q9UJX4 755 aa19.96■□□□□ 0.79
CPSF3-201ENST00000238112 TMEM120BA0PK00 339 aa19.95■□□□□ 0.78
CPSF3-201ENST00000238112 ZBED4O75132 1171 aa19.95■□□□□ 0.78
CPSF3-201ENST00000238112 BPIFB4P59827 614 aa19.95■□□□□ 0.78
CPSF3-201ENST00000238112 ENPEPQ07075 957 aa19.95■□□□□ 0.78
CPSF3-201ENST00000238112 DGKZQ13574 1117 aa19.95■□□□□ 0.78
CPSF3-201ENST00000238112 LRRC14Q15048 493 aa19.95■□□□□ 0.78
CPSF3-201ENST00000238112 TRPM8Q7Z2W7 1104 aa19.95■□□□□ 0.78
CPSF3-201ENST00000238112 ATL2Q8NHH9 583 aa19.95■□□□□ 0.78
CPSF3-201ENST00000238112 ZKSCAN4Q969J2 545 aaPredicted RBP19.95■□□□□ 0.78
CPSF3-201ENST00000238112 ZNF277Q9NRM2 450 aaPredicted RBP19.95■□□□□ 0.78
CPSF3-201ENST00000238112 DNAJC17Q9NVM6 304 aaKnown RBP19.95■□□□□ 0.78
CPSF3-201ENST00000238112 PSME4Q14997 1843 aa19.95■□□□□ 0.78
CPSF3-201ENST00000238112 MYPNQ86TC9 1320 aa19.95■□□□□ 0.78
CPSF3-201ENST00000238112 ADGRA3Q8IWK6 1321 aa19.95■□□□□ 0.78
CPSF3-201ENST00000238112 IVDP26440 423 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 CENPCQ03188 943 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 RTKN2Q8IZC4 609 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 MTMR14Q8NCE2 650 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 DDX27Q96GQ7 796 aaKnown RBP19.94■□□□□ 0.78
CPSF3-201ENST00000238112 PGAP2Q9UHJ9 254 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 SLC12A4Q9UP95 1085 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 DKC1O60832 514 aaKnown RBP eCLIP19.94■□□□□ 0.78
CPSF3-201ENST00000238112 VPS41P49754 854 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 MCPH1Q8NEM0 835 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 FAM84AQ96KN4 292 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 IFT74Q96LB3 600 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 FNBP1Q96RU3 617 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 HERPUD2Q9BSE4 406 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 KCNK9Q9NPC2 374 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 CD2APQ9Y5K6 639 aa19.94■□□□□ 0.78
CPSF3-201ENST00000238112 DGAT1O75907 488 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms