RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 C10orf82Q8WW14 230 aa16.48■□□□□ 0.23
VTN-201ENST00000226218 MAIP1Q8WWC4 291 aa16.48■□□□□ 0.23
VTN-201ENST00000226218 SH3GL3Q99963 347 aa16.48■□□□□ 0.23
VTN-201ENST00000226218 PLVAPQ9BX97 442 aa16.48■□□□□ 0.23
VTN-201ENST00000226218 KIAA1683Q9H0B3 1180 aa16.48■□□□□ 0.23
VTN-201ENST00000226218 TLE6Q9H808 572 aa16.48■□□□□ 0.23
VTN-201ENST00000226218 HAO1Q9UJM8 370 aa16.48■□□□□ 0.23
VTN-201ENST00000226218 PHTF1Q9UMS5 762 aa16.48■□□□□ 0.23
VTN-201ENST00000226218 DPPA5A6NC42 116 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 PRPF4O43172 522 aaKnown RBP eCLIP16.47■□□□□ 0.23
VTN-201ENST00000226218 AHCYL1O43865 530 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 GRIN3BO60391 1043 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 RRM1P23921 792 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 ADSSP30520 456 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 HOXA13P31271 388 aaPredicted RBP16.47■□□□□ 0.23
VTN-201ENST00000226218 PRELPP51888 382 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 GTF2IP78347 998 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 RNASELQ05823 741 aaKnown RBP16.47■□□□□ 0.23
VTN-201ENST00000226218 CETN1Q12798 172 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 SETDB1Q15047 1291 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 LLGL1Q15334 1064 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 TRIP13Q15645 432 aaPredicted RBP16.47■□□□□ 0.23
VTN-201ENST00000226218 USH1GQ495M9 461 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 VSIG1Q86XK7 387 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 DDX1Q92499 740 aaKnown RBP16.47■□□□□ 0.23
VTN-201ENST00000226218 TBC1D10AQ9BXI6 508 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 YIPF3Q9GZM5 350 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 TMEM117Q9H0C3 514 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 UBN1Q9NPG3 1134 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 LRRC4BQ9NT99 713 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 GRID1Q9ULK0 1009 aa16.47■□□□□ 0.23
VTN-201ENST00000226218 TISP43B9A030 160 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 RASA4BC9J798 803 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 MAPK13O15264 365 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 RASA4O43374 803 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 GAS8O95995 478 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 HLA-DOAP06340 250 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 ACADSP16219 412 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 RAD23BP54727 409 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 CDR2Q01850 454 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 ADCY1Q08828 1119 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 KLF1Q13351 362 aaPredicted RBP16.46■□□□□ 0.23
VTN-201ENST00000226218 PTF1AQ7RTS3 328 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 PRUNE1Q86TP1 453 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 KIAA0825Q8IV33 1275 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 CNBD1Q8NA66 436 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 ATL2Q8NHH9 583 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 SPOCK2Q92563 424 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 LRRC37BQ96QE4 947 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 NACC1Q96RE7 527 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 CYLDQ9NQC7 956 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 R3HDM2Q9Y2K5 976 aaKnown RBP16.46■□□□□ 0.23
VTN-201ENST00000226218 ENO4A6NNW6 628 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 EDF1O60869 148 aaKnown RBP16.46■□□□□ 0.23
VTN-201ENST00000226218 CYP11B1P15538 503 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 ZNF76P36508 570 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 MRPS35P82673 323 aaKnown RBP16.46■□□□□ 0.23
VTN-201ENST00000226218 CENPCQ03188 943 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 DNAJC3Q13217 504 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 LBRQ14739 615 aaKnown RBP16.46■□□□□ 0.23
VTN-201ENST00000226218 SGSM1Q2NKQ1 1148 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 CDC42EP5Q6NZY7 148 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 B3GNT9Q6UX72 402 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 TDRPQ86YL5 185 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 SYCP3Q8IZU3 236 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 ZSWIM2Q8NEG5 633 aa16.46■□□□□ 0.23
VTN-201ENST00000226218 SPDYE1Q8NFV5 336 aaPredicted RBP16.46■□□□□ 0.23
VTN-201ENST00000226218 DDX27Q96GQ7 796 aaKnown RBP16.46■□□□□ 0.23
VTN-201ENST00000226218 MROH7Q68CQ1 1323 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 ANKRD33BA6NCL7 494 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 CHMP2AO43633 222 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 DCTN3O75935 186 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 NPTXRO95502 500 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 TUBP50607 506 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 TMED2Q15363 201 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 PDK4Q16654 411 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 ACAD10Q6JQN1 1059 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 PRR5LQ6MZQ0 368 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 APLFQ8IW19 511 aaPredicted RBP16.45■□□□□ 0.22
VTN-201ENST00000226218 LARGE2Q8N3Y3 721 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 CFAP61Q8NHU2 1237 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 C9orf72Q96LT7 481 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 CBWD1Q9BRT8 395 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 PCIF1Q9H4Z3 704 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 SLCO1B3Q9NPD5 702 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 MAPTP10636 758 aaKnown RBP16.45■□□□□ 0.22
VTN-201ENST00000226218 EPHB2P29323 1055 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 ADCY8P40145 1251 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 CTCFP49711 727 aaPredicted RBP16.45■□□□□ 0.22
VTN-201ENST00000226218 MXI1P50539 228 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 NFIAQ12857 509 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 NR1H3Q13133 447 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 CCDC142Q17RM4 750 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.45■□□□□ 0.22
VTN-201ENST00000226218 LONP2Q86WA8 852 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 ZFPM1Q8IX07 1006 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 BBOF1Q8ND07 529 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 PARD3BQ8TEW8 1205 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 RPGRQ92834 1020 aaKnown RBP16.45■□□□□ 0.22
VTN-201ENST00000226218 NUDCD1Q96RS6 583 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms