RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Clcn2Q9R0A1 908 aa13.96□□□□□ -0.17
Ssr1-203ENSMUST00000225246 Cntnap5cQ0V8T7 1305 aa13.96□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Psme4Q5SSW2 1843 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Card9A2AIV8 536 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Mroh5E9PUJ8 762 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Olfr552E9Q545 317 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Gcnt4E9Q649 455 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Rtn2O70622 471 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Adcy8P97490 1249 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Lmntd2Q0VET5 664 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Gxylt1Q3UHH8 404 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Sfi1Q3UZY0 1216 aaKnown RBP13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Vps41Q5KU39 853 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Sec23ipQ6NZC7 998 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Xpnpep1Q6P1B1 623 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Ankfy1Q810B6 1169 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Znf879Q8BI99 563 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Acbd3Q8BMP6 525 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Epc2Q8C0I4 808 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Haus3Q8QZX2 570 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Pcdhb12Q91Y07 789 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Tlr3Q99MB1 905 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Kcnh7Q9ER47 1195 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Myoz2Q9JJW5 264 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Scn3aA2ASI5 1947 aa13.95□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Znf804aA2AKY4 1200 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Pus7B7ZNL8 666 aaKnown RBP13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Per1O35973 1291 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Rrm1P07742 792 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Eno1P17182 434 aaKnown RBP13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Akr1b7P21300 316 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Adcy7P51829 1099 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Lrrn4P59383 733 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Atp11aP98197 1187 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Slc10a4Q3UEZ8 437 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 XiapQ60989 496 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Ankrd13dQ6PD24 605 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Ccdc50Q810U5 305 aaKnown RBP13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Wasf2Q8BH43 497 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Usp37Q8C0R0 979 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 McmbpQ8R3C0 642 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Bzw1Q9CQC6 419 aaKnown RBP13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Tmx2Q9D710 295 aaKnown RBP13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 H2-OaQ9QWV1 250 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Arhgef10Q8C033 1345 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Znf536Q8K083 1302 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Zscan4-ps3A0A1B0GRH6 506 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Zscan4-ps2A0A1C7CYU6 506 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Gm6583E9Q8Z1 469 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Trove2O08848 538 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 CflarO35732 481 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 GzmgP13366 248 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Tph1P17532 447 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 CtshP49935 333 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Mnat1P51949 309 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Trim80Q3V061 624 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 MaeaQ4VC33 396 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Kctd19Q562E2 927 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Atl2Q6PA06 583 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 PhkbQ7TSH2 1085 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Dupd1Q8BK84 215 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Cpsf7Q8BTV2 471 aaKnown RBP13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Naa25Q8BWZ3 972 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Dppa3Q8QZY3 150 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Borcs6Q9D6W8 360 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Sgf29Q9DA08 293 aaKnown RBP13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Znf654Q9DAU9 571 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Rsc1a1Q9ER99 582 aa13.94□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Scgb2b21A0A087WQA9 112 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 1700018F24RikB2RW27 314 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Gm5926E9PWJ8 236 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Zfp275G3X904 499 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Gm21962L7N280 338 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 CnpP16330 420 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Rnf216P58283 853 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Plk1Q07832 603 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Nat8lQ3UGX3 299 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 D630036H23RikQ3UQD6 204 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Fam92bQ3V2J0 292 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Tfap2bQ61313 459 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Impg2Q80XH2 1243 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 EtnpplQ8BWU8 499 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Pop1Q8K205 1045 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 MgarpQ8VI64 283 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Dnajc9Q91WN1 259 aaKnown RBP13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 St13Q99L47 371 aaKnown RBP13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Npm3Q9CPP0 175 aaKnown RBP13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 YwhabQ9CQV8 246 aaKnown RBP13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Snx10Q9CWT3 201 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Mrps22Q9CXW2 359 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Lrrc34Q9DAM1 415 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Anxa9Q9JHQ0 345 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Sv2aQ9JIS5 742 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Pdk2Q9JK42 407 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 PodxlQ9R0M4 503 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Bcorl1A2AQH4 1781 aa13.93□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Slc6a16A0A1L1SR47 742 aa13.92□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Itgb5O70309 798 aa13.92□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Myl1P05977 188 aa13.92□□□□□ -0.18
Ssr1-203ENSMUST00000225246 Hmgb2P30681 210 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms