RNA–Protein interactions for RNA: ENSMUST00000112736.7

Vps4b-202, Transcript of Vacuolar protein sorting-associated protein 4B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4b, Length 4,539 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4b-202ENSMUST00000112736 Fam173bQ9D1Z3 247 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Alkbh1P0CB42 389 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Rbm20Q3UQS8 1199 aaKnown RBP13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 PRAG1Q571I4 1179 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Brip1Q5SXJ3 1174 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Sema5aQ62217 1077 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 PoliQ6R3M4 717 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ahnak2E9PYB0 1738 aaKnown RBP13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Fgf15O35622 218 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 OtulinQ3UCV8 352 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Best3Q6H1V1 669 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Zdhhc14Q8BQQ1 489 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ppp1r3aQ99MR9 1089 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Cep83Q9D5R3 692 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Sapcd2Q9D818 391 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ubiad1Q9DC60 336 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Noc2lQ9WV70 747 aaKnown RBP13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Olfr1354E9Q5G9 310 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Olfr67F8VPJ8 320 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Atp9aO70228 1047 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Eif3eP60229 445 aaKnown RBP13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ppp3caP63328 521 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Klra6Q60653 266 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Krt42Q6IFX2 452 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ccdc68Q8BVC4 333 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Gpc5Q8CAL5 572 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Mrps22Q9CXW2 359 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Snf8Q9CZ28 258 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Drc3Q9D5E4 523 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ift172Q6VH22 1749 aa13.54□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ccdc175E9PVB3 822 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Oog1E9Q5G7 496 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Cd44P15379 778 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Usp10P52479 792 aaKnown RBP13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Kcnn2P58390 839 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 rp9P97762 213 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Edem3Q2HXL6 931 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ksr1Q61097 873 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Bcar1Q61140 874 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 PnocQ64387 187 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 WhrnQ80VW5 918 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ssx2ipQ8VC66 615 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 MajinQ9D992 256 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ddx20Q9JJY4 825 aaKnown RBP13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Slc2a5Q9WV38 501 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Rrm1P07742 792 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Rab6bP61294 208 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ext2P70428 718 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Rnf139Q7TMV1 668 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Chmp2bQ8BJF9 213 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Gpr150Q8BL07 427 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Tmem260Q8BMD6 703 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Lig4Q8BTF7 911 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Tbc1d22aQ8R5A6 516 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Glis2Q8VDL9 521 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Noxred1Q9D3S5 366 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 LrmdaQ9D9B4 229 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ror2Q9Z138 944 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Slit2Q9R1B9 1521 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 EloblA6PWE0 161 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Adad1Q5SUE7 619 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Cdc14aQ6GQT0 603 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Znf579Q80VM4 562 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ccdc50Q810U5 305 aaKnown RBP13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Aldh5a1Q8BWF0 523 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Trim32Q8CH72 655 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Champ1Q8K327 802 aaKnown RBP13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Snapc2Q91XA5 359 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Fkbp6Q91XW8 327 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 MycbpQ9EQS3 103 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Slc13a1Q9JHI4 594 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Capn15Q9JLG8 1095 aa13.53□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Gm13084A2A8N0 494 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Rap1gapA2ALS5 663 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Apba1B2RUJ5 842 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Psma2P49722 234 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Lrch1P62046 709 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Muc3aQ3U5A2 218 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Ppp4r3cQ3V0Y1 813 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Zbtb8osQ505B7 168 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Gipc1Q9Z0G0 333 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Efcab12V9GXH0 673 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Gm15448F6PZL4 682 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Wee1P47810 646 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Rad54lP70270 747 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Snip1Q8BIZ6 383 aaKnown RBP13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Znf445Q8R2V3 986 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Olfr395Q8VGR3 312 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Lztr1Q9CQ33 837 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Dnajc12Q9R022 198 aa13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Map1bP14873 2464 aaKnown RBP13.52□□□□□ -0.24
Vps4b-202ENSMUST00000112736 Hmgcs2P54869 508 aa13.52□□□□□ -0.25
Vps4b-202ENSMUST00000112736 Uchl4P58321 233 aa13.52□□□□□ -0.25
Vps4b-202ENSMUST00000112736 Tmem120bQ3TA38 339 aa13.52□□□□□ -0.25
Vps4b-202ENSMUST00000112736 Pak4Q8BTW9 593 aa13.52□□□□□ -0.25
Vps4b-202ENSMUST00000112736 4933409G03RikQ8C5U0 320 aa13.52□□□□□ -0.25
Vps4b-202ENSMUST00000112736 Upb1Q8VC97 393 aa13.52□□□□□ -0.25
Vps4b-202ENSMUST00000112736 ChiaQ91XA9 473 aa13.52□□□□□ -0.25
Vps4b-202ENSMUST00000112736 Polr3eQ9CZT4 710 aa13.52□□□□□ -0.25
Vps4b-202ENSMUST00000112736 Syf2Q9D198 242 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms