RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Snx17Q8BVL3 470 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pomgnt2Q8BW41 605 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Psrc1Q9D0P7 329 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Arhgef7Q9ES28 862 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ppp2r3cQ9JK24 453 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Klra10Q9R1G6 266 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Slc22a3Q9WTW5 551 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cdhr2E9Q7P9 1308 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Srp72F8VQC1 671 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 GpiP06745 558 aaKnown RBP9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 CblP22682 913 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Arpp19P56212 112 aaKnown RBP9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Dmc1Q61880 340 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 XpaQ64267 272 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Edrf1Q6GQV7 1239 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Scn3bQ8BHK2 215 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Trpa1Q8BLA8 1125 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 H2afy2Q8CCK0 372 aaKnown RBP9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Spata1Q9D5R4 444 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Capn9Q9D805 690 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Mrpl46Q9EQI8 283 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ap4s1Q9WVL1 144 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm4871D3Z0W7 314 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 1600015I10RikE9Q745 711 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm5160F8VPN3 147 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Kcna1P16388 495 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Atp5bP56480 529 aaKnown RBP9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Stxbp2Q64324 593 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Acap2Q6ZQK5 770 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Dppa3Q8QZY3 150 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Thoc1Q8R3N6 657 aaKnown RBP9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Stx18Q8VDS8 334 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 PawrQ925B0 333 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Abtb1Q99LJ2 478 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Dusp10Q9ESS0 483 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Plod1Q9R0E2 728 aa9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pbrm1Q8BSQ9 1634 aaKnown RBP9.62□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Adam7O35227 789 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Hps5P59438 1126 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Zcwpw1Q6IR42 630 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Senp6Q6P7W0 1132 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Scd4Q6T707 353 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Olfml3Q8BK62 406 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Scfd2Q8BTY8 684 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Trim47Q8C0E3 641 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Trip10Q8CJ53 603 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 C8aQ8K182 587 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Dynll2Q9D0M5 89 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pcsk1nQ9QXV0 258 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cdk12Q14AX6 1484 aaKnown RBP9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 CemipQ8BI06 1361 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Card9A2AIV8 536 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm3755K7N743 167 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Anxa8O35640 327 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Vti1bO88384 232 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Irf8P23611 424 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 HdcP23738 662 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Atp4aQ64436 1033 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Dhx40Q6PE54 779 aaKnown RBP9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Slitrk2Q810C0 846 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pfdn1Q9CWM4 122 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Nek3Q9R0A5 511 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gja10Q9WUS4 505 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Slfn2Q9Z0I6 378 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cdh18E9Q9Q6 790 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm3460E9QAI8 215 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cdk4P30285 303 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Sar1aP36536 198 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 CtshP49935 333 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Mxi1P50540 228 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Rit2P70425 217 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Dsg1aQ61495 1057 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 CrkQ64010 304 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Srrm3Q80WV7 648 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Dhx32Q8BZS9 744 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Dync1li1Q8R1Q8 523 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Eif3hQ91WK2 352 aaKnown RBP9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tmed10Q9D1D4 219 aaKnown RBP9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pik3cgQ9JHG7 1102 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pdk2Q9JK42 407 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Trpc5Q9QX29 975 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Nfu1Q9QZ23 255 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 M1apQ9Z0E1 529 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Olfr310B2RVZ1 332 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 OatP29758 439 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cdh15P33146 784 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 ItgaeQ60677 1167 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Hoxa13Q62424 386 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Znf219Q6IQX8 726 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Adck2Q6NSR3 617 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Fam107aQ78TU8 144 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Lsm7Q9CQQ8 103 aaKnown RBP9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cmtr1Q9DBC3 837 aa9.61□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm4869A0A1B0GSG7 984 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 1700016G14RikA0A286YCZ6 238 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Iqca1lA6H690 825 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Fam47eD3YWC7 402 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Trim15G3UY57 292 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Aff1O88573 1216 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Olfm1O88998 485 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms