RNA–Protein interactions for RNA: tC(GCA)P1

tC(GCA)P1, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)P1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)P1tC(GCA)P1 RPL30P14120 105 aaKnown RBP2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 SRP102P36057 244 aaPredicted RBP2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 ECM4P36156 370 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 FMP23P38231 175 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 GPP2P40106 250 aaKnown RBP2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 ATG18P43601 500 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 TTI2P47168 421 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 PHB2P50085 310 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 YDR239CQ03780 787 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 HFD1Q04458 532 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 FSH2Q05015 223 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 ATG38Q05789 226 aaKnown RBP2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 LIP2Q06005 328 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 RGC1Q06108 1083 aaKnown RBP2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 AEP3Q12089 606 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 ISA2Q12425 185 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 EAF3Q12432 401 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 APC2Q12440 853 aa2.32□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 RPC40P07703 335 aaKnown RBP2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 FUN19P28003 413 aaPredicted RBP2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 AFG1P32317 509 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 NDC1P32500 655 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 NUF2P33895 451 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 LTV1P34078 463 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 NAT2P37293 288 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 PHM8P40025 321 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 PUG1P40100 303 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 BUD8P41698 603 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 AAD14P42884 376 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 SAM37P50110 327 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 DIA3P52290 468 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 HAL1Q01766 294 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 YKR005CQ02203 525 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 YDR179W-AQ03983 463 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 RAD33Q04231 177 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 ECM18Q04623 453 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 GRC3Q07845 632 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 VAM3Q12241 283 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 YDL007C-AQ2V2Q0 85 aa2.31□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 AAC1P04710 309 aa2.3□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 HEM13P11353 328 aaKnown RBP2.3□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 SNF4P12904 322 aa2.3□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 SNF6P18888 332 aa2.3□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 ATG22P25568 528 aa2.3□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 PHO91P27514 894 aa2.3□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 IDH1P28834 360 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
tC(GCA)P1tC(GCA)P1 SWD2P36104 329 aaPredicted RBP2.3□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 VBA2P38358 474 aaKnown RBP2.3□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 BOL3P39724 118 aa2.3□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 YND1P40009 630 aa2.3□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 STB1P42845 420 aa2.3□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 LRS4Q04087 347 aaKnown RBP2.3□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 SFM1Q12314 213 aa2.3□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 ANB1P19211 157 aa2.29□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 HYM1P32464 399 aa2.29□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 PDC2P32896 925 aa2.29□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 AFR1P33304 620 aa2.29□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 FRM2P37261 193 aa2.29□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 NOP16P40007 231 aaKnown RBP2.29□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 COX15P40086 486 aa2.29□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 SAM50P53969 484 aa2.29□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 YMR244WQ04018 355 aa2.29□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 ATG39Q06159 398 aa2.29□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 STP4Q07351 490 aa2.29□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 RRT8Q08219 342 aa2.29□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 RKM1Q08961 583 aaPredicted RBP2.29□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 KIN28P06242 306 aa2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 ERG2P32352 222 aa2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 SIP1P32578 815 aa2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 MDM31P38880 579 aa2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 SIM1P40472 476 aa2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 TDA10P42938 290 aa2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 AGX1P43567 385 aa2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 RPL9BP51401 191 aaKnown RBP2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 YGL159WP53110 370 aa2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 MRX8Q05473 314 aa2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 ASR1Q06834 288 aa2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 PBP4Q07362 185 aaKnown RBP2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 IRC23Q08416 157 aa2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 ALG6Q12001 544 aaKnown RBP2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 YDL199CQ12407 687 aa2.28□□□□□ -2.04
tC(GCA)P1tC(GCA)P1 RPL25P04456 142 aaKnown RBP2.27□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 MRP20P32387 263 aa2.27□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 PRP21P32524 280 aaPredicted RBP2.27□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 QDR3P38227 689 aa2.27□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 IMD2P38697 523 aaKnown RBP2.27□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 IPT1P38954 527 aa2.27□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 MPM1P40364 252 aa2.27□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 IDS2P46958 469 aa2.27□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 MRM2P53123 320 aa2.27□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 HSK3P69852 69 aa2.27□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 NOG1Q02892 647 aaKnown RBP2.27□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 SWA2Q06677 668 aa2.27□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 YPR013CQ12145 317 aa2.27□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 CDC8P00572 216 aa2.26□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 DPM1P14020 267 aaKnown RBP2.26□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 ILV6P25605 309 aaKnown RBP2.26□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 YPS1P32329 569 aa2.26□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 YKR045CP36138 183 aa2.26□□□□□ -2.05
tC(GCA)P1tC(GCA)P1 YBR032WP38223 100 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 81.6 ms