RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	SAM50	P53969	484 aa		6.15	□□□□□ -1.42
SNT309	YPR101W	YML018C	Q03730	393 aa		6.15	□□□□□ -1.42
SNT309	YPR101W	YDR248C	Q03786	193 aa		6.15	□□□□□ -1.42
SNT309	YPR101W	RVB1	Q03940	463 aa	Known RBP	6.15	□□□□□ -1.42
SNT309	YPR101W	LRS4	Q04087	347 aa	Known RBP	6.15	□□□□□ -1.42
SNT309	YPR101W	SCP1	Q08873	200 aa		6.15	□□□□□ -1.42
SNT309	YPR101W	TGS1	Q12052	315 aa		6.15	□□□□□ -1.42
SNT309	YPR101W	VAM3	Q12241	283 aa		6.15	□□□□□ -1.42
SNT309	YPR101W	PRS5	Q12265	496 aa	Known RBP	6.15	□□□□□ -1.42
SNT309	YPR101W	YOR343C	Q12484	108 aa		6.15	□□□□□ -1.42
SNT309	YPR101W	YLR146W-A	Q2V2P1	62 aa		6.15	□□□□□ -1.42
SNT309	YPR101W	STE18	P18852	110 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	AIM17	P23180	465 aa	Known RBP	6.14	□□□□□ -1.43
SNT309	YPR101W	MEK1	P24719	497 aa	Predicted RBP	6.14	□□□□□ -1.43
SNT309	YPR101W	IMG2	P25642	146 aa	Predicted RBP	6.14	□□□□□ -1.43
SNT309	YPR101W	ERG3	P32353	365 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	HOG1	P32485	435 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	RMD6	P39975	231 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	TIF34	P40217	347 aa	Known RBP	6.14	□□□□□ -1.43
SNT309	YPR101W	LSM8	P47093	109 aa	Known RBP	6.14	□□□□□ -1.43
SNT309	YPR101W	YJR141W	P47172	347 aa	Predicted RBP	6.14	□□□□□ -1.43
SNT309	YPR101W	SOL1	P50278	321 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	UFD1	P53044	361 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	MRPL22	P53881	309 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	YLR460C	P54007	376 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	PET191	Q02772	108 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	SNO1	Q03144	224 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	YMR279C	Q03263	540 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	FIT1	Q04433	528 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	MDM30	Q05930	598 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	RRT7	Q07829	113 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	IRC19	Q07843	230 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	THI73	Q07904	523 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	CMC2	Q3E7A4	109 aa		6.14	□□□□□ -1.43
SNT309	YPR101W	MSW1	P04803	379 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	YSF3	P0C074	85 aa	Predicted RBP	6.13	□□□□□ -1.43
SNT309	YPR101W	RPL1A	P0CX43	217 aa	Known RBP	6.13	□□□□□ -1.43
SNT309	YPR101W	RPL1B	P0CX44	217 aa	Known RBP	6.13	□□□□□ -1.43
SNT309	YPR101W	RFA3	P26755	122 aa	Known RBP	6.13	□□□□□ -1.43
SNT309	YPR101W	PPA2	P28239	310 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	VMA5	P31412	392 aa	Known RBP	6.13	□□□□□ -1.43
SNT309	YPR101W	SIP1	P32578	815 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	6.13	□□□□□ -1.43	not detected
SNT309	YPR101W	RPS27A	P35997	82 aa	Known RBP	6.13	□□□□□ -1.43
SNT309	YPR101W	ATP3	P38077	311 aa	Known RBP	6.13	□□□□□ -1.43
SNT309	YPR101W	ATG8	P38182	117 aa	RIP-Chip data	6.13	□□□□□ -1.43	not detected
SNT309	YPR101W	UMP1	P38293	148 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	RPS27B	P38711	82 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	SPC25	P40014	221 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	AGX1	P43567	385 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	ADO1	P47143	340 aa	Known RBP	6.13	□□□□□ -1.43
SNT309	YPR101W	BRR6	P53062	197 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	AAH1	P53909	347 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	SWS2	P53937	143 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	HAS1	Q03532	505 aa	Known RBP	6.13	□□□□□ -1.43
SNT309	YPR101W	RTT103	Q05543	409 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	NNT1	Q05874	261 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	DGK1	Q12382	290 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	COX19	Q3E731	98 aa		6.13	□□□□□ -1.43
SNT309	YPR101W	QCR2	P07257	368 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	SGA1	P08019	549 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	TY1A-LR4	P0C2I8	440 aa	Known RBP	6.12	□□□□□ -1.43
SNT309	YPR101W	TY1A-DR6	P0CX70	440 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	TY1A-ER1	P0CX71	440 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	TY1A-LR2	P0CX72	440 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	TY1A-PL	P0CX73	440 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	TY1A-JR1	P0CX74	440 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	TY1A-LR3	P0CX75	440 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	TY1A-ML2	P0CX76	440 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	SED4	P25365	1065 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	ARO4	P32449	370 aa	Known RBP	6.12	□□□□□ -1.43
SNT309	YPR101W	FRM2	P37261	193 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	YJL193W	P39542	402 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	SHR5	P41912	237 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	HXT14	P42833	540 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	NSE4	P43124	402 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	SSN8	P47821	323 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	SEH1	P53011	349 aa	Known RBP	6.12	□□□□□ -1.43
SNT309	YPR101W	PKP2	P53170	491 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	MPA43	P53583	542 aa	Predicted RBP	6.12	□□□□□ -1.43
SNT309	YPR101W	SNP1	Q00916	300 aa	Predicted RBP	6.12	□□□□□ -1.43
SNT309	YPR101W	MRPS17	Q03246	237 aa	Predicted RBP	6.12	□□□□□ -1.43
SNT309	YPR101W	ERP1	Q05359	219 aa	Known RBP	6.12	□□□□□ -1.43
SNT309	YPR101W	PAL1	Q05518	499 aa	Known RBP	6.12	□□□□□ -1.43
SNT309	YPR101W	YFT2	Q06676	274 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	MIM1	Q08176	113 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	TY1A-GR1	Q12085	440 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	YPR063C	Q12160	140 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	YCT1	Q12235	531 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	WHI5	Q12416	295 aa		6.12	□□□□□ -1.43
SNT309	YPR101W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	6.12	□□□□□ -1.43
SNT309	YPR101W	TY1A-OL	Q92392	440 aa	Known RBP	6.12	□□□□□ -1.43
SNT309	YPR101W	SCEI	P03882	235 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	CDC7	P06243	507 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	PET494	P07390	489 aa	Predicted RBP	6.11	□□□□□ -1.43
SNT309	YPR101W	DAT1	P13483	248 aa	Known RBP	6.11	□□□□□ -1.43
SNT309	YPR101W	MXR2	P25566	168 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	KRR1	P25586	316 aa	Predicted RBP	6.11	□□□□□ -1.43
SNT309	YPR101W	STP22	P25604	385 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	MTC7	P32633	139 aa		6.11	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms