RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W VMA5P31412 392 aaKnown RBP8.19□□□□□ -1.1
BRR1YPR057W MRT4P33201 236 aaKnown RBP8.19□□□□□ -1.1
BRR1YPR057W MRPL39P36533 70 aa8.19□□□□□ -1.1
BRR1YPR057W GLY1P37303 387 aaKnown RBP8.19□□□□□ -1.1
BRR1YPR057W MOH1P38191 138 aa8.19□□□□□ -1.1
BRR1YPR057W YER137CP40083 148 aaKnown RBP8.19□□□□□ -1.1
BRR1YPR057W YJL016WP47072 561 aa8.19□□□□□ -1.1
BRR1YPR057W GTF1P53260 183 aaPredicted RBP8.19□□□□□ -1.1
BRR1YPR057W YPL278CQ08990 100 aa8.19□□□□□ -1.1
BRR1YPR057W YDL180WQ12301 547 aa8.19□□□□□ -1.1
BRR1YPR057W TRM13Q12383 476 aa8.19□□□□□ -1.1
BRR1YPR057W IRA2P19158 3079 aa8.19□□□□□ -1.1
BRR1YPR057W TDH3P00359 332 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
BRR1YPR057W PUT1P09368 476 aa8.18□□□□□ -1.1
BRR1YPR057W CKS1P20486 150 aaKnown RBP8.18□□□□□ -1.1
BRR1YPR057W CPR4P25334 318 aa8.18□□□□□ -1.1
BRR1YPR057W ACB1P31787 87 aa8.18□□□□□ -1.1
BRR1YPR057W RPS26AP39938 119 aaKnown RBP8.18□□□□□ -1.1
BRR1YPR057W RPS26BP39939 119 aaKnown RBP8.18□□□□□ -1.1
BRR1YPR057W PHB1P40961 287 aa8.18□□□□□ -1.1
BRR1YPR057W TNA1P53322 534 aa8.18□□□□□ -1.1
BRR1YPR057W YNR040WP53736 256 aa8.18□□□□□ -1.1
BRR1YPR057W YNR048WP53740 393 aa8.18□□□□□ -1.1
BRR1YPR057W YLR224WQ05947 369 aa8.18□□□□□ -1.1
BRR1YPR057W PHO2P07269 559 aa8.17□□□□□ -1.1
BRR1YPR057W DSF1P0CX08 502 aa8.17□□□□□ -1.1
BRR1YPR057W YNR073CP0CX09 502 aa8.17□□□□□ -1.1
BRR1YPR057W RPL30P14120 105 aaKnown RBP8.17□□□□□ -1.1
BRR1YPR057W YCR016WP25617 290 aaKnown RBP8.17□□□□□ -1.1
BRR1YPR057W RFA3P26755 122 aaKnown RBP8.17□□□□□ -1.1
BRR1YPR057W FMT1P32785 401 aa8.17□□□□□ -1.1
BRR1YPR057W YEL057CP39983 233 aa8.17□□□□□ -1.1
BRR1YPR057W ATF1P40353 525 aa8.17□□□□□ -1.1
BRR1YPR057W AVT4P50944 713 aa8.17□□□□□ -1.1
BRR1YPR057W NSA1P53136 463 aaPredicted RBP8.17□□□□□ -1.1
BRR1YPR057W ELA1P53861 379 aaPredicted RBP8.17□□□□□ -1.1
BRR1YPR057W SMX3P54999 86 aaPredicted RBP8.17□□□□□ -1.1
BRR1YPR057W YAP6Q03935 383 aa8.17□□□□□ -1.1
BRR1YPR057W THI72Q08579 599 aa8.17□□□□□ -1.1
BRR1YPR057W MSL5Q12186 476 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
BRR1YPR057W IZH2Q12442 317 aa8.17□□□□□ -1.1
BRR1YPR057W PET20Q99373 253 aa8.17□□□□□ -1.1
BRR1YPR057W MCM1P11746 286 aa8.16□□□□□ -1.1
BRR1YPR057W YBL010CP32788 280 aa8.16□□□□□ -1.1
BRR1YPR057W VAM7P32912 316 aa8.16□□□□□ -1.1
BRR1YPR057W MTC6P38849 526 aa8.16□□□□□ -1.1
BRR1YPR057W QDR1P40475 563 aa8.16□□□□□ -1.1
BRR1YPR057W YGR210CP42942 411 aa8.16□□□□□ -1.1
BRR1YPR057W ECM27P47144 725 aa8.16□□□□□ -1.1
BRR1YPR057W ACS2P52910 683 aaKnown RBP8.16□□□□□ -1.1
BRR1YPR057W LAP3Q01532 483 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
BRR1YPR057W MRX9Q07349 420 aaKnown RBP8.16□□□□□ -1.1
BRR1YPR057W USB1Q12208 290 aaKnown RBP8.16□□□□□ -1.1
BRR1YPR057W RTR2Q12378 196 aa8.16□□□□□ -1.1
BRR1YPR057W ERP4Q12450 207 aa8.16□□□□□ -1.1
BRR1YPR057W YBR298C-AQ8TGK4 73 aa8.16□□□□□ -1.1
BRR1YPR057W AAC1P04710 309 aa8.15□□□□□ -1.1
BRR1YPR057W IFM1P25038 676 aa8.15□□□□□ -1.1
BRR1YPR057W YKL063CP35725 167 aa8.15□□□□□ -1.1
BRR1YPR057W PAN3P36102 679 aaPredicted RBP8.15□□□□□ -1.1
BRR1YPR057W MRPL36P36531 177 aa8.15□□□□□ -1.1
BRR1YPR057W PHM8P40025 321 aa8.15□□□□□ -1.1
BRR1YPR057W MOB2P43563 287 aa8.15□□□□□ -1.1
BRR1YPR057W SKP1P52286 194 aa8.15□□□□□ -1.1
BRR1YPR057W SYM1Q06563 197 aa8.15□□□□□ -1.1
BRR1YPR057W PRM4Q12498 284 aa8.15□□□□□ -1.1
BRR1YPR057W CDC28P00546 298 aaKnown RBP8.14□□□□□ -1.11
BRR1YPR057W RPL7AP05737 244 aaKnown RBP8.14□□□□□ -1.11
BRR1YPR057W RFA1P22336 621 aaKnown RBP8.14□□□□□ -1.11
BRR1YPR057W AIM46P38885 310 aa8.14□□□□□ -1.11
BRR1YPR057W YND1P40009 630 aa8.14□□□□□ -1.11
BRR1YPR057W SNX4P47057 423 aa8.14□□□□□ -1.11
BRR1YPR057W OKP1P53298 406 aa8.14□□□□□ -1.11
BRR1YPR057W PRM15Q03262 622 aa8.14□□□□□ -1.11
BRR1YPR057W YML018CQ03730 393 aa8.14□□□□□ -1.11
BRR1YPR057W SPR28Q04921 423 aa8.14□□□□□ -1.11
BRR1YPR057W RPL7BQ12213 244 aaKnown RBP8.14□□□□□ -1.11
BRR1YPR057W RPS31P05759 152 aaKnown RBP8.13□□□□□ -1.11
BRR1YPR057W TRR1P29509 319 aaKnown RBP8.13□□□□□ -1.11
BRR1YPR057W ERG3P32353 365 aa8.13□□□□□ -1.11
BRR1YPR057W AGA2P32781 87 aa8.13□□□□□ -1.11
BRR1YPR057W ARO9P38840 513 aaPredicted RBP8.13□□□□□ -1.11
BRR1YPR057W SWM2P40342 146 aa8.13□□□□□ -1.11
BRR1YPR057W GNA1P43577 159 aaPredicted RBP8.13□□□□□ -1.11
BRR1YPR057W RPN14P53196 417 aa8.13□□□□□ -1.11
BRR1YPR057W RCE1Q03530 315 aa8.13□□□□□ -1.11
BRR1YPR057W RRP15Q06511 250 aaPredicted RBP8.13□□□□□ -1.11
BRR1YPR057W RAF1Q06891 181 aa8.13□□□□□ -1.11
BRR1YPR057W BBP1Q12365 385 aa8.13□□□□□ -1.11
BRR1YPR057W ATG15P25641 520 aa8.12□□□□□ -1.11
BRR1YPR057W MRPS5P33759 307 aa8.12□□□□□ -1.11
BRR1YPR057W YMR262WP38430 313 aa8.12□□□□□ -1.11
BRR1YPR057W GEP4P38812 185 aa8.12□□□□□ -1.11
BRR1YPR057W GWT1P47026 490 aa8.12□□□□□ -1.11
BRR1YPR057W YDR248CQ03786 193 aa8.12□□□□□ -1.11
BRR1YPR057W YDR391CQ04170 232 aa8.12□□□□□ -1.11
BRR1YPR057W RFU1Q08003 200 aa8.12□□□□□ -1.11
BRR1YPR057W FMP16Q12497 93 aa8.12□□□□□ -1.11
BRR1YPR057W HUT1Q12520 339 aa8.12□□□□□ -1.11
BRR1YPR057W YGL194C-AQ2V2P6 80 aa8.12□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms