RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W GOS1P38736 223 aa8.54□□□□□ -1.04
MSF1YPR047W EGD2P38879 174 aaKnown RBP8.54□□□□□ -1.04
MSF1YPR047W YND1P40009 630 aa8.54□□□□□ -1.04
MSF1YPR047W FMC1P40491 155 aa8.54□□□□□ -1.04
MSF1YPR047W PMT5P52867 743 aa8.54□□□□□ -1.04
MSF1YPR047W YPL108WQ02872 168 aaPredicted RBP8.54□□□□□ -1.04
MSF1YPR047W CAC2Q04199 468 aa8.54□□□□□ -1.04
MSF1YPR047W FRE6Q12473 712 aa8.54□□□□□ -1.04
MSF1YPR047W SPS4P09937 338 aa8.53□□□□□ -1.04
MSF1YPR047W DPB2P24482 689 aaPredicted RBP8.53□□□□□ -1.04
MSF1YPR047W NAT2P37293 288 aa8.53□□□□□ -1.04
MSF1YPR047W IES5P40060 125 aa8.53□□□□□ -1.04
MSF1YPR047W SLD3P53135 668 aa8.53□□□□□ -1.04
MSF1YPR047W PAU12P53343 120 aa8.53□□□□□ -1.04
MSF1YPR047W YGK3Q12222 375 aaPredicted RBP8.53□□□□□ -1.04
MSF1YPR047W YPR1Q12458 312 aa8.53□□□□□ -1.04
MSF1YPR047W VPS17P32913 551 aa8.52□□□□□ -1.05
MSF1YPR047W SDS24P38314 527 aa8.52□□□□□ -1.05
MSF1YPR047W XPT1P47165 209 aa8.52□□□□□ -1.05
MSF1YPR047W SRL4Q03085 281 aa8.52□□□□□ -1.05
MSF1YPR047W GRC3Q07845 632 aa8.52□□□□□ -1.05
MSF1YPR047W SRL1Q08673 210 aa8.52□□□□□ -1.05
MSF1YPR047W COX9P07255 59 aa8.51□□□□□ -1.05
MSF1YPR047W FUN26P31381 517 aa8.51□□□□□ -1.05
MSF1YPR047W MKS1P34072 584 aa8.51□□□□□ -1.05
MSF1YPR047W MTC2P34246 357 aa8.51□□□□□ -1.05
MSF1YPR047W NTA1P40354 457 aa8.51□□□□□ -1.05
MSF1YPR047W LYS20P48570 428 aaKnown RBP8.51□□□□□ -1.05
MSF1YPR047W YGL204CP53089 101 aa8.51□□□□□ -1.05
MSF1YPR047W MRH4P53166 561 aa8.51□□□□□ -1.05
MSF1YPR047W FMP42Q04991 504 aa8.51□□□□□ -1.05
MSF1YPR047W LYS21Q12122 440 aaKnown RBP8.51□□□□□ -1.05
MSF1YPR047W MSH5Q12175 901 aa8.51□□□□□ -1.05
MSF1YPR047W MRP1P10662 321 aaKnown RBP8.5□□□□□ -1.05
MSF1YPR047W PIR5P46999 287 aa8.5□□□□□ -1.05
MSF1YPR047W POP6P53218 158 aa8.5□□□□□ -1.05
MSF1YPR047W TLG1Q03322 224 aa8.5□□□□□ -1.05
MSF1YPR047W YMR252CQ04814 134 aa8.5□□□□□ -1.05
MSF1YPR047W PEX30Q06169 523 aa8.5□□□□□ -1.05
MSF1YPR047W MRX9Q07349 420 aaKnown RBP8.5□□□□□ -1.05
MSF1YPR047W FRE5Q08908 694 aa8.5□□□□□ -1.05
MSF1YPR047W RAX2Q12465 1220 aa8.5□□□□□ -1.05
MSF1YPR047W TMA19P35691 167 aaKnown RBP8.49□□□□□ -1.05
MSF1YPR047W PAU24P38155 120 aa8.49□□□□□ -1.05
MSF1YPR047W MSS2P40990 351 aa8.49□□□□□ -1.05
MSF1YPR047W YGR054WP53235 642 aaKnown RBP8.49□□□□□ -1.05
MSF1YPR047W HLR1Q04429 423 aa8.49□□□□□ -1.05
MSF1YPR047W TRM10Q12400 293 aa8.49□□□□□ -1.05
MSF1YPR047W EAF3Q12432 401 aa8.49□□□□□ -1.05
MSF1YPR047W CDC28P00546 298 aaKnown RBP8.48□□□□□ -1.05
MSF1YPR047W RPL25P04456 142 aaKnown RBP8.48□□□□□ -1.05
MSF1YPR047W VMA3P25515 160 aa8.48□□□□□ -1.05
MSF1YPR047W UTP11P34247 250 aaPredicted RBP8.48□□□□□ -1.05
MSF1YPR047W RCN1P36054 211 aa8.48□□□□□ -1.05
MSF1YPR047W ADH6Q04894 360 aaKnown RBP8.48□□□□□ -1.05
MSF1YPR047W ARR2Q06597 130 aa8.48□□□□□ -1.05
MSF1YPR047W IES3Q12345 250 aa8.48□□□□□ -1.05
MSF1YPR047W MPD1Q12404 318 aaKnown RBP8.48□□□□□ -1.05
MSF1YPR047W HUT1Q12520 339 aa8.48□□□□□ -1.05
MSF1YPR047W MATALPHA1P0CY06 175 aa8.47□□□□□ -1.05
MSF1YPR047W HMLALPHA1P0CY07 175 aa8.47□□□□□ -1.05
MSF1YPR047W MDH1P17505 334 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
MSF1YPR047W IMP1P28627 190 aa8.47□□□□□ -1.05
MSF1YPR047W VMA6P32366 345 aaKnown RBP8.47□□□□□ -1.05
MSF1YPR047W ICS2P38284 255 aa8.47□□□□□ -1.05
MSF1YPR047W SSN8P47821 323 aa8.47□□□□□ -1.05
MSF1YPR047W YGL114WP53134 725 aa8.47□□□□□ -1.05
MSF1YPR047W LIP2Q06005 328 aa8.47□□□□□ -1.05
MSF1YPR047W NMA1Q06178 401 aaKnown RBP8.47□□□□□ -1.05
MSF1YPR047W DOA4P32571 926 aa8.46□□□□□ -1.05
MSF1YPR047W ISC10P32645 267 aa8.46□□□□□ -1.05
MSF1YPR047W ALG14P38242 237 aa8.46□□□□□ -1.05
MSF1YPR047W SSZ1P38788 538 aaKnown RBP8.46□□□□□ -1.05
MSF1YPR047W PAM16P42949 149 aa8.46□□□□□ -1.05
MSF1YPR047W YDL186WP48568 277 aa8.46□□□□□ -1.05
MSF1YPR047W ASR1Q06834 288 aa8.46□□□□□ -1.05
MSF1YPR047W HEM25Q07534 307 aa8.46□□□□□ -1.05
MSF1YPR047W MED11Q99278 115 aa8.46□□□□□ -1.05
MSF1YPR047W REP2P03872 296 aa8.46□□□□□ -1.06
MSF1YPR047W ATP10P18496 279 aa8.46□□□□□ -1.06
MSF1YPR047W SNC2P33328 115 aa8.46□□□□□ -1.06
MSF1YPR047W BNA1P47096 177 aa8.46□□□□□ -1.06
MSF1YPR047W YJR120WP47157 116 aa8.46□□□□□ -1.06
MSF1YPR047W ORT1Q12375 292 aa8.46□□□□□ -1.06
MSF1YPR047W TY1A-NL1Q12391 440 aaKnown RBP8.46□□□□□ -1.06
MSF1YPR047W GDH1P07262 454 aaKnown RBP8.45□□□□□ -1.06
MSF1YPR047W NPL6P32832 435 aa8.45□□□□□ -1.06
MSF1YPR047W YNK1P36010 153 aaKnown RBP8.45□□□□□ -1.06
MSF1YPR047W PRY2P36110 329 aa8.45□□□□□ -1.06
MSF1YPR047W SOL3P38858 249 aa8.45□□□□□ -1.06
MSF1YPR047W NVJ1P38881 321 aa8.45□□□□□ -1.06
MSF1YPR047W MRX5P47007 382 aa8.45□□□□□ -1.06
MSF1YPR047W UPS1Q05776 175 aa8.45□□□□□ -1.06
MSF1YPR047W YLR283WQ05867 314 aa8.45□□□□□ -1.06
MSF1YPR047W YOR186WQ08560 144 aa8.45□□□□□ -1.06
MSF1YPR047W ADK1P07170 222 aaKnown RBP8.44□□□□□ -1.06
MSF1YPR047W PRE7P23724 241 aaKnown RBP8.44□□□□□ -1.06
MSF1YPR047W AIM46P38885 310 aa8.44□□□□□ -1.06
MSF1YPR047W AVT6P40074 448 aa8.44□□□□□ -1.06
MSF1YPR047W RBL2P48606 106 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 78.7 ms