RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C FRE6Q12473 712 aa6.07□□□□□ -1.44
UME1YPL139C SPO24Q3E752 67 aa6.07□□□□□ -1.44
UME1YPL139C GPM1P00950 247 aaKnown RBP6.06□□□□□ -1.44
UME1YPL139C SAG1P20840 650 aa6.06□□□□□ -1.44
UME1YPL139C YOX1P34161 385 aa6.06□□□□□ -1.44
UME1YPL139C YBR197CP38306 217 aa6.06□□□□□ -1.44
UME1YPL139C YGL159WP53110 370 aa6.06□□□□□ -1.44
UME1YPL139C DIG2Q03373 323 aaKnown RBP6.06□□□□□ -1.44
UME1YPL139C YDR514CQ04408 483 aa6.06□□□□□ -1.44
UME1YPL139C GAL83Q04739 417 aa6.06□□□□□ -1.44
UME1YPL139C CCW14O13547 238 aa6.06□□□□□ -1.44
UME1YPL139C ADK1P07170 222 aaKnown RBP6.06□□□□□ -1.44
UME1YPL139C YML003WP0CF16 290 aa6.06□□□□□ -1.44
UME1YPL139C RPL30P14120 105 aaKnown RBP6.06□□□□□ -1.44
UME1YPL139C MDH1P17505 334 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
UME1YPL139C ANR2P36090 516 aaPredicted RBP6.06□□□□□ -1.44
UME1YPL139C TCM62P38228 572 aaKnown RBP6.06□□□□□ -1.44
UME1YPL139C SDS24P38314 527 aa6.06□□□□□ -1.44
UME1YPL139C ARC40P38328 384 aaKnown RBP6.06□□□□□ -1.44
UME1YPL139C ARO9P38840 513 aaPredicted RBP6.06□□□□□ -1.44
UME1YPL139C NOP16P40007 231 aaKnown RBP6.06□□□□□ -1.44
UME1YPL139C YND1P40009 630 aa6.06□□□□□ -1.44
UME1YPL139C GZF3P42944 551 aaKnown RBP6.06□□□□□ -1.44
UME1YPL139C MTL1P53214 551 aa6.06□□□□□ -1.44
UME1YPL139C GMC1Q04399 608 aa6.06□□□□□ -1.44
UME1YPL139C TY1A-NL1Q12391 440 aaKnown RBP6.06□□□□□ -1.44
UME1YPL139C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
UME1YPL139C MED11Q99278 115 aa6.06□□□□□ -1.44
UME1YPL139C RPB9P27999 122 aa6.05□□□□□ -1.44
UME1YPL139C ARO7P32178 256 aa6.05□□□□□ -1.44
UME1YPL139C MTC7P32633 139 aa6.05□□□□□ -1.44
UME1YPL139C NPL6P32832 435 aa6.05□□□□□ -1.44
UME1YPL139C PAU24P38155 120 aa6.05□□□□□ -1.44
UME1YPL139C MED8P38304 223 aa6.05□□□□□ -1.44
UME1YPL139C RMD6P39975 231 aa6.05□□□□□ -1.44
UME1YPL139C SLM1P40485 686 aa6.05□□□□□ -1.44
UME1YPL139C MSS2P40990 351 aa6.05□□□□□ -1.44
UME1YPL139C BUD8P41698 603 aa6.05□□□□□ -1.44
UME1YPL139C GON7P46984 123 aa6.05□□□□□ -1.44
UME1YPL139C YNR048WP53740 393 aa6.05□□□□□ -1.44
UME1YPL139C YLR152CP54072 576 aa6.05□□□□□ -1.44
UME1YPL139C MAK3Q03503 176 aa6.05□□□□□ -1.44
UME1YPL139C GPI17Q04080 534 aa6.05□□□□□ -1.44
UME1YPL139C YPR098CQ06089 161 aa6.05□□□□□ -1.44
UME1YPL139C PHO92Q06390 306 aa6.05□□□□□ -1.44
UME1YPL139C YER145C-AA0A023PYF4 145 aa6.04□□□□□ -1.44
UME1YPL139C MET17P06106 444 aa6.04□□□□□ -1.44
UME1YPL139C GCD1P09032 578 aaPredicted RBP6.04□□□□□ -1.44
UME1YPL139C CNE1P27825 502 aa6.04□□□□□ -1.44
UME1YPL139C FUN26P31381 517 aa6.04□□□□□ -1.44
UME1YPL139C AFG1P32317 509 aa6.04□□□□□ -1.44
UME1YPL139C MTH1P35198 433 aa6.04□□□□□ -1.44
UME1YPL139C SSH1P38353 490 aaKnown RBP6.04□□□□□ -1.44
UME1YPL139C YHL044WP38727 235 aa6.04□□□□□ -1.44
UME1YPL139C YLF2P38746 405 aa6.04□□□□□ -1.44
UME1YPL139C SSZ1P38788 538 aaKnown RBP6.04□□□□□ -1.44
UME1YPL139C YER079WP40052 210 aaKnown RBP6.04□□□□□ -1.44
UME1YPL139C PDS1P40316 373 aaPredicted RBP6.04□□□□□ -1.44
UME1YPL139C SUT1P53032 299 aaKnown RBP6.04□□□□□ -1.44
UME1YPL139C CAC2Q04199 468 aa6.04□□□□□ -1.44
UME1YPL139C UTP15Q04305 513 aaKnown RBP6.04□□□□□ -1.44
UME1YPL139C MDM36Q06820 579 aa6.04□□□□□ -1.44
UME1YPL139C RFU1Q08003 200 aa6.04□□□□□ -1.44
UME1YPL139C FRE3Q08905 711 aa6.04□□□□□ -1.44
UME1YPL139C MPD1Q12404 318 aaKnown RBP6.04□□□□□ -1.44
UME1YPL139C YPR1Q12458 312 aa6.04□□□□□ -1.44
UME1YPL139C HUT1Q12520 339 aa6.04□□□□□ -1.44
UME1YPL139C YMR105W-AQ8TGS8 64 aa6.04□□□□□ -1.44
UME1YPL139C YGL041W-AP0C5N3 154 aa6.03□□□□□ -1.44
UME1YPL139C MRP1P10662 321 aaKnown RBP6.03□□□□□ -1.44
UME1YPL139C NAM2P11325 894 aa6.03□□□□□ -1.44
UME1YPL139C HXT2P23585 541 aa6.03□□□□□ -1.44
UME1YPL139C ERG24P32462 438 aaKnown RBP6.03□□□□□ -1.44
UME1YPL139C PPZ2P33329 710 aa6.03□□□□□ -1.44
UME1YPL139C SIT1P39980 628 aa6.03□□□□□ -1.44
UME1YPL139C NTA1P40354 457 aa6.03□□□□□ -1.44
UME1YPL139C DLS1P40366 167 aa6.03□□□□□ -1.44
UME1YPL139C SGN1P40561 250 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
UME1YPL139C ERJ5P43613 295 aaPredicted RBP6.03□□□□□ -1.44
UME1YPL139C YHC3P47040 408 aa6.03□□□□□ -1.44
UME1YPL139C YJR096WP47137 282 aa6.03□□□□□ -1.44
UME1YPL139C ERV25P54837 211 aaKnown RBP6.03□□□□□ -1.44
UME1YPL139C RBD2Q12270 262 aa6.03□□□□□ -1.44
UME1YPL139C VCX1Q99385 411 aa6.03□□□□□ -1.44
UME1YPL139C COX9P07255 59 aa6.02□□□□□ -1.45
UME1YPL139C PRE7P23724 241 aaKnown RBP6.02□□□□□ -1.45
UME1YPL139C DAL3P32459 195 aa6.02□□□□□ -1.45
UME1YPL139C VPS17P32913 551 aa6.02□□□□□ -1.45
UME1YPL139C NVJ1P38881 321 aa6.02□□□□□ -1.45
UME1YPL139C YGL204CP53089 101 aa6.02□□□□□ -1.45
UME1YPL139C NSA1P53136 463 aaPredicted RBP6.02□□□□□ -1.45
UME1YPL139C NRK1P53915 240 aa6.02□□□□□ -1.45
UME1YPL139C BUD25P85052 153 aa6.02□□□□□ -1.45
UME1YPL139C RIM9Q04734 239 aa6.02□□□□□ -1.45
UME1YPL139C MSA1Q08471 629 aa6.02□□□□□ -1.45
UME1YPL139C USB1Q12208 290 aaKnown RBP6.02□□□□□ -1.45
UME1YPL139C ORT1Q12375 292 aa6.02□□□□□ -1.45
UME1YPL139C YLR099W-AQ3E798 87 aa6.02□□□□□ -1.45
UME1YPL139C REP2P03872 296 aa6.01□□□□□ -1.45
UME1YPL139C MSS4P38994 779 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms