RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W YLR462WO13556 202 aa0.38□□□□□ -2.35
SGF11YPL047W GCD2P12754 651 aaPredicted RBP0.38□□□□□ -2.35
SGF11YPL047W FRS2P15625 503 aaKnown RBP0.38□□□□□ -2.35
SGF11YPL047W SEC22P22214 214 aa0.38□□□□□ -2.35
SGF11YPL047W ICL1P28240 557 aaPredicted RBP0.38□□□□□ -2.35
SGF11YPL047W OAC1P32332 324 aa0.38□□□□□ -2.35
SGF11YPL047W ERV15P38312 142 aa0.38□□□□□ -2.35
SGF11YPL047W YHR125WP38831 101 aa0.38□□□□□ -2.35
SGF11YPL047W YEL075CP39972 122 aa0.38□□□□□ -2.35
SGF11YPL047W YER189WP40104 122 aa0.38□□□□□ -2.35
SGF11YPL047W YGL185CP53100 379 aa0.38□□□□□ -2.35
SGF11YPL047W CPD1P53314 239 aa0.38□□□□□ -2.35
SGF11YPL047W FAR8Q05040 523 aa0.38□□□□□ -2.35
SGF11YPL047W NEJ1Q06148 342 aa0.38□□□□□ -2.35
SGF11YPL047W CTR3Q06686 241 aa0.38□□□□□ -2.35
SGF11YPL047W PER33Q12144 273 aa0.38□□□□□ -2.35
SGF11YPL047W ATO3Q12359 275 aa0.38□□□□□ -2.35
SGF11YPL047W SNF8Q12483 233 aa0.38□□□□□ -2.35
SGF11YPL047W RPC40P07703 335 aaKnown RBP0.37□□□□□ -2.35
SGF11YPL047W YHR032W-AP0C5N6 59 aa0.37□□□□□ -2.35
SGF11YPL047W GPA2P10823 449 aa0.37□□□□□ -2.35
SGF11YPL047W UGA1P17649 471 aa0.37□□□□□ -2.35
SGF11YPL047W GPI12P23797 304 aa0.37□□□□□ -2.35
SGF11YPL047W SSH1P38353 490 aaKnown RBP0.37□□□□□ -2.35
SGF11YPL047W PEX18P38855 283 aa0.37□□□□□ -2.35
SGF11YPL047W LSB1P53281 241 aa0.37□□□□□ -2.35
SGF11YPL047W YNR062CP53748 327 aa0.37□□□□□ -2.35
SGF11YPL047W CDC14Q00684 551 aa0.37□□□□□ -2.35
SGF11YPL047W SPO19Q03029 223 aa0.37□□□□□ -2.35
SGF11YPL047W SML1Q04964 104 aa0.37□□□□□ -2.35
SGF11YPL047W SIR4P11978 1358 aa0.36□□□□□ -2.35
SGF11YPL047W STH1P32597 1359 aa0.36□□□□□ -2.35
SGF11YPL047W FKS1P38631 1876 aaKnown RBP0.36□□□□□ -2.35
SGF11YPL047W RPL9AP05738 191 aaKnown RBP0.36□□□□□ -2.35
SGF11YPL047W GRX2P17695 143 aaKnown RBP0.36□□□□□ -2.35
SGF11YPL047W POF1P25576 258 aa0.36□□□□□ -2.35
SGF11YPL047W HEK2P38199 381 aaKnown RBP RIP-Chip data0.36□□□□□ -2.35not detected
SGF11YPL047W THO1P40040 218 aaKnown RBP0.36□□□□□ -2.35
SGF11YPL047W RSM25P40496 264 aa0.36□□□□□ -2.35
SGF11YPL047W YIL001WP40560 513 aa0.36□□□□□ -2.35
SGF11YPL047W DSN1P40568 576 aa0.36□□□□□ -2.35
SGF11YPL047W RPL9BP51401 191 aaKnown RBP0.36□□□□□ -2.35
SGF11YPL047W TOS8P53147 276 aa0.36□□□□□ -2.35
SGF11YPL047W MRH4P53166 561 aa0.36□□□□□ -2.35
SGF11YPL047W YGL034CP53186 121 aa0.36□□□□□ -2.35
SGF11YPL047W MAL13P53338 473 aa0.36□□□□□ -2.35
SGF11YPL047W YNL260CP53846 198 aa0.36□□□□□ -2.35
SGF11YPL047W ERV41Q04651 352 aa0.36□□□□□ -2.35
SGF11YPL047W ARR2Q06597 130 aa0.36□□□□□ -2.35
SGF11YPL047W TPO4Q12256 659 aa0.36□□□□□ -2.35
SGF11YPL047W YBL008W-AQ3E821 79 aa0.36□□□□□ -2.35
SGF11YPL047W TPM1P17536 199 aaKnown RBP0.35□□□□□ -2.35
SGF11YPL047W PET9P18239 318 aaKnown RBP0.35□□□□□ -2.35
SGF11YPL047W HSM3P38348 480 aa0.35□□□□□ -2.35
SGF11YPL047W YHR180WP38868 163 aa0.35□□□□□ -2.35
SGF11YPL047W AGE2P40529 298 aa0.35□□□□□ -2.35
SGF11YPL047W MPA43P53583 542 aaPredicted RBP0.35□□□□□ -2.35
SGF11YPL047W YDR124WQ04608 324 aa0.35□□□□□ -2.35
SGF11YPL047W ARV1Q06541 321 aa0.35□□□□□ -2.35
SGF11YPL047W SYC1Q08553 188 aaPredicted RBP0.35□□□□□ -2.35
SGF11YPL047W RRS1Q08746 203 aaKnown RBP0.35□□□□□ -2.35
SGF11YPL047W PGC1Q08959 321 aa0.35□□□□□ -2.35
SGF11YPL047W YPR011CQ12251 326 aa0.35□□□□□ -2.35
SGF11YPL047W BBP1Q12365 385 aa0.35□□□□□ -2.35
SGF11YPL047W MSW1P04803 379 aa0.34□□□□□ -2.36
SGF11YPL047W SNA3P14359 133 aa0.34□□□□□ -2.36
SGF11YPL047W CSM1P25651 190 aa0.34□□□□□ -2.36
SGF11YPL047W TMA19P35691 167 aaKnown RBP0.34□□□□□ -2.36
SGF11YPL047W FZO1P38297 855 aa0.34□□□□□ -2.36
SGF11YPL047W ICE2P40499 491 aa0.34□□□□□ -2.36
SGF11YPL047W RMR1P53060 241 aa0.34□□□□□ -2.36
SGF11YPL047W GTR2P53290 341 aa0.34□□□□□ -2.36
SGF11YPL047W SPP2Q02521 185 aa0.34□□□□□ -2.36
SGF11YPL047W ABZ2Q03266 374 aa0.34□□□□□ -2.36
SGF11YPL047W YPL119C-AQ3E751 87 aa0.34□□□□□ -2.36
SGF11YPL047W SPT7P35177 1332 aa0.34□□□□□ -2.36
SGF11YPL047W MEI4P29467 408 aa0.33□□□□□ -2.36
SGF11YPL047W ERG24P32462 438 aaKnown RBP0.33□□□□□ -2.36
SGF11YPL047W BIG1P38813 335 aa0.33□□□□□ -2.36
SGF11YPL047W YER076CP40049 302 aa0.33□□□□□ -2.36
SGF11YPL047W DDI1P40087 428 aa0.33□□□□□ -2.36
SGF11YPL047W YJR056CP47115 236 aa0.33□□□□□ -2.36
SGF11YPL047W ERV29P53337 310 aa0.33□□□□□ -2.36
SGF11YPL047W UBC7Q02159 165 aa0.33□□□□□ -2.36
SGF11YPL047W HEM25Q07534 307 aa0.33□□□□□ -2.36
SGF11YPL047W YPL162CQ12042 273 aa0.33□□□□□ -2.36
SGF11YPL047W RSR1P13856 272 aa0.32□□□□□ -2.36
SGF11YPL047W MEK1P24719 497 aaPredicted RBP0.32□□□□□ -2.36
SGF11YPL047W VMA11P32842 164 aa0.32□□□□□ -2.36
SGF11YPL047W BLI1P35727 113 aa0.32□□□□□ -2.36
SGF11YPL047W MSA2P36157 363 aa0.32□□□□□ -2.36
SGF11YPL047W FIS1P40515 155 aa0.32□□□□□ -2.36
SGF11YPL047W TIR3P40552 269 aa0.32□□□□□ -2.36
SGF11YPL047W GCD14P46959 383 aaPredicted RBP0.32□□□□□ -2.36
SGF11YPL047W FMP33P46998 180 aa0.32□□□□□ -2.36
SGF11YPL047W MRX5P47007 382 aa0.32□□□□□ -2.36
SGF11YPL047W RPL37AP49166 88 aaKnown RBP0.32□□□□□ -2.36
SGF11YPL047W YGL159WP53110 370 aa0.32□□□□□ -2.36
SGF11YPL047W GOT1Q03554 138 aa0.32□□□□□ -2.36
SGF11YPL047W YMR007WQ03675 126 aa0.32□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms