RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	MRPL39	P36533	70 aa		2.81	□□□□□ -1.96
CAF20	YOR276W	MRPS9	P38120	278 aa		2.81	□□□□□ -1.96
CAF20	YOR276W	RFC4	P40339	323 aa	Known RBP	2.81	□□□□□ -1.96
CAF20	YOR276W	ALG13	P53178	202 aa		2.81	□□□□□ -1.96
CAF20	YOR276W	YGR067C	P53243	804 aa		2.81	□□□□□ -1.96
CAF20	YOR276W	CUS2	P53830	285 aa	Predicted RBP	2.81	□□□□□ -1.96
CAF20	YOR276W	SMD1	Q02260	146 aa	Predicted RBP	2.81	□□□□□ -1.96
CAF20	YOR276W	PIN3	Q06449	215 aa		2.81	□□□□□ -1.96
CAF20	YOR276W	YBL008W-A	Q3E821	79 aa		2.81	□□□□□ -1.96
CAF20	YOR276W	PAN1	P32521	1480 aa		2.81	□□□□□ -1.96
CAF20	YOR276W	YDR157W	A0A023PZE8	133 aa		2.8	□□□□□ -1.96
CAF20	YOR276W	RPL28	P02406	149 aa	Known RBP	2.8	□□□□□ -1.96
CAF20	YOR276W	CKA2	P19454	339 aa		2.8	□□□□□ -1.96
CAF20	YOR276W	DRE2	P36152	348 aa		2.8	□□□□□ -1.96
CAF20	YOR276W	ADO1	P47143	340 aa	Known RBP	2.8	□□□□□ -1.96
CAF20	YOR276W	NIF3	P53081	288 aa		2.8	□□□□□ -1.96
CAF20	YOR276W	YGL034C	P53186	121 aa		2.8	□□□□□ -1.96
CAF20	YOR276W	SEI1	Q06058	285 aa		2.8	□□□□□ -1.96
CAF20	YOR276W	YOL019W	Q08157	551 aa		2.8	□□□□□ -1.96
CAF20	YOR276W	YPR011C	Q12251	326 aa		2.8	□□□□□ -1.96
CAF20	YOR276W	SWI1	P09547	1314 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	MER1	P16523	270 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	PPH21	P23594	369 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.79	□□□□□ -1.96	not detected
CAF20	YOR276W	SSO1	P32867	290 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	TAF14	P35189	244 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	CAB3	P36076	571 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	YHL044W	P38727	235 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	YHI9	P38765	294 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	YMR144W	P40214	342 aa	Known RBP	2.79	□□□□□ -1.96
CAF20	YOR276W	PRE6	P40303	254 aa	Known RBP	2.79	□□□□□ -1.96
CAF20	YOR276W	HAM1	P47119	197 aa	Known RBP	2.79	□□□□□ -1.96
CAF20	YOR276W	MIC26	P50087	233 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	NSA1	P53136	463 aa	Predicted RBP	2.79	□□□□□ -1.96
CAF20	YOR276W	MRH4	P53166	561 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	GOT1	Q03554	138 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	YMR114C	Q04471	368 aa	Known RBP	2.79	□□□□□ -1.96
CAF20	YOR276W	YMR226C	Q05016	267 aa	Known RBP	2.79	□□□□□ -1.96
CAF20	YOR276W	HEM25	Q07534	307 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	YPS3	Q12303	508 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	YBL112C	Q3E7Y4	105 aa		2.79	□□□□□ -1.96
CAF20	YOR276W	NUP157	P40064	1391 aa	Known RBP	2.78	□□□□□ -1.96
CAF20	YOR276W	RAD9	P14737	1309 aa		2.78	□□□□□ -1.96
CAF20	YOR276W	BCY1	P07278	416 aa	Known RBP	2.78	□□□□□ -1.96
CAF20	YOR276W	YPK2	P18961	677 aa		2.78	□□□□□ -1.96
CAF20	YOR276W	DPB2	P24482	689 aa	Predicted RBP	2.78	□□□□□ -1.96
CAF20	YOR276W	YHB1	P39676	399 aa	Known RBP	2.78	□□□□□ -1.96
CAF20	YOR276W	YJL028W	P47062	111 aa		2.78	□□□□□ -1.96
CAF20	YOR276W	EMI1	Q04406	187 aa		2.78	□□□□□ -1.96
CAF20	YOR276W	YDR124W	Q04608	324 aa		2.78	□□□□□ -1.96
CAF20	YOR276W	YLR179C	Q06252	201 aa	Known RBP	2.78	□□□□□ -1.96
CAF20	YOR276W	YPL264C	Q08980	353 aa		2.78	□□□□□ -1.96
CAF20	YOR276W	JLP1	Q12358	412 aa		2.78	□□□□□ -1.96
CAF20	YOR276W	DCN1	Q12395	269 aa		2.78	□□□□□ -1.96
CAF20	YOR276W	SOD1	P00445	154 aa	Known RBP	2.77	□□□□□ -1.97
CAF20	YOR276W	HTB1	P02293	131 aa	Known RBP	2.77	□□□□□ -1.97
CAF20	YOR276W	HTB2	P02294	131 aa		2.77	□□□□□ -1.97
CAF20	YOR276W	SNA3	P14359	133 aa		2.77	□□□□□ -1.97
CAF20	YOR276W	YAK1	P14680	807 aa		2.77	□□□□□ -1.97
CAF20	YOR276W	CUP2	P15315	225 aa		2.77	□□□□□ -1.97
CAF20	YOR276W	APA2	P22108	325 aa		2.77	□□□□□ -1.97
CAF20	YOR276W	ASF2	P32448	525 aa	Predicted RBP	2.77	□□□□□ -1.97
CAF20	YOR276W	YJR149W	P47177	404 aa		2.77	□□□□□ -1.97
CAF20	YOR276W	TVP15	Q03860	143 aa		2.77	□□□□□ -1.97
CAF20	YOR276W	YPR172W	Q06608	200 aa		2.77	□□□□□ -1.97
CAF20	YOR276W	SYC1	Q08553	188 aa	Predicted RBP	2.77	□□□□□ -1.97
CAF20	YOR276W	YOR186W	Q08560	144 aa		2.77	□□□□□ -1.97
CAF20	YOR276W	TIM22	Q12328	207 aa		2.77	□□□□□ -1.97
CAF20	YOR276W	PRX1	P34227	261 aa	Known RBP	2.76	□□□□□ -1.97
CAF20	YOR276W	SSH1	P38353	490 aa	Known RBP	2.76	□□□□□ -1.97
CAF20	YOR276W	TRR2	P38816	342 aa		2.76	□□□□□ -1.97
CAF20	YOR276W	MCM22	P47167	239 aa		2.76	□□□□□ -1.97
CAF20	YOR276W	NUP57	P48837	541 aa		2.76	□□□□□ -1.97
CAF20	YOR276W	MGA1	P53050	456 aa		2.76	□□□□□ -1.97
CAF20	YOR276W	FLC3	P53121	802 aa		2.76	□□□□□ -1.97
CAF20	YOR276W	TOS8	P53147	276 aa		2.76	□□□□□ -1.97
CAF20	YOR276W	YNL046W	P53956	172 aa		2.76	□□□□□ -1.97
CAF20	YOR276W	MSA1	Q08471	629 aa		2.76	□□□□□ -1.97
CAF20	YOR276W	IES3	Q12345	250 aa		2.76	□□□□□ -1.97
CAF20	YOR276W	YEL009C-A	A0A023PZF2	135 aa		2.75	□□□□□ -1.97
CAF20	YOR276W	COX5A	P00424	153 aa		2.75	□□□□□ -1.97
CAF20	YOR276W	SPT3	P06844	337 aa		2.75	□□□□□ -1.97
CAF20	YOR276W	URA6	P15700	204 aa		2.75	□□□□□ -1.97
CAF20	YOR276W	RFA3	P26755	122 aa	Known RBP	2.75	□□□□□ -1.97
CAF20	YOR276W	TRM7	P38238	310 aa	Known RBP	2.75	□□□□□ -1.97
CAF20	YOR276W	SPL2	P38839	148 aa		2.75	□□□□□ -1.97
CAF20	YOR276W	YRB2	P40517	327 aa		2.75	□□□□□ -1.97
CAF20	YOR276W	HST4	P53688	370 aa		2.75	□□□□□ -1.97
CAF20	YOR276W	FYV6	P53913	173 aa		2.75	□□□□□ -1.97
CAF20	YOR276W	ECM11	Q04110	302 aa		2.75	□□□□□ -1.97
CAF20	YOR276W	YDR222W	Q04925	415 aa		2.75	□□□□□ -1.97
CAF20	YOR276W	SLD7	Q08457	257 aa		2.75	□□□□□ -1.97
CAF20	YOR276W	PRR2	Q12310	699 aa		2.75	□□□□□ -1.97
CAF20	YOR276W	YPL229W	Q99395	206 aa		2.75	□□□□□ -1.97
CAF20	YOR276W	TUS1	Q06412	1307 aa		2.74	□□□□□ -1.97
CAF20	YOR276W	MID2	P36027	376 aa		2.74	□□□□□ -1.97
CAF20	YOR276W	IKI1	P38874	309 aa		2.74	□□□□□ -1.97
CAF20	YOR276W	SUR2	P38992	349 aa		2.74	□□□□□ -1.97
CAF20	YOR276W	RSM27	P53305	110 aa		2.74	□□□□□ -1.97
CAF20	YOR276W	NOP19	P53317	196 aa	Predicted RBP	2.74	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms