RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
RPN8YOR261C RCN1P36054 211 aa2.31□□□□□ -2.04
RPN8YOR261C BAT2P47176 376 aaKnown RBP2.31□□□□□ -2.04
RPN8YOR261C ASI3P53983 676 aa2.31□□□□□ -2.04
RPN8YOR261C DAL82P21705 255 aa2.3□□□□□ -2.04
RPN8YOR261C SMB1P40018 196 aaKnown RBP2.3□□□□□ -2.04
RPN8YOR261C RTT105P40063 208 aa2.3□□□□□ -2.04
RPN8YOR261C SNX4P47057 423 aa2.3□□□□□ -2.04
RPN8YOR261C COQ10Q08058 207 aa2.3□□□□□ -2.04
RPN8YOR261C MRP1P10662 321 aaKnown RBP2.29□□□□□ -2.04
RPN8YOR261C SEC22P22214 214 aa2.29□□□□□ -2.04
RPN8YOR261C DOA4P32571 926 aa2.29□□□□□ -2.04
RPN8YOR261C JEN1P36035 616 aa2.29□□□□□ -2.04
RPN8YOR261C YER189WP40104 122 aa2.29□□□□□ -2.04
RPN8YOR261C SMD3P43321 101 aaKnown RBP2.29□□□□□ -2.04
RPN8YOR261C COS8P38723 381 aa2.28□□□□□ -2.04
RPN8YOR261C THO1P40040 218 aaKnown RBP2.28□□□□□ -2.04
RPN8YOR261C MEP1P40260 492 aa2.28□□□□□ -2.04
RPN8YOR261C SNZ3P43545 298 aa2.28□□□□□ -2.04
RPN8YOR261C GPI8P49018 411 aa2.28□□□□□ -2.04
RPN8YOR261C MRH4P53166 561 aa2.28□□□□□ -2.04
RPN8YOR261C ADH6Q04894 360 aaKnown RBP2.28□□□□□ -2.04
RPN8YOR261C ATG17Q06410 417 aa2.28□□□□□ -2.04
RPN8YOR261C MRX3P38172 270 aa2.27□□□□□ -2.05
RPN8YOR261C SSH1P38353 490 aaKnown RBP2.27□□□□□ -2.05
RPN8YOR261C GLG2P47011 380 aa2.27□□□□□ -2.05
RPN8YOR261C CTF19Q02732 369 aa2.27□□□□□ -2.05
RPN8YOR261C YDR124WQ04608 324 aa2.27□□□□□ -2.05
RPN8YOR261C YLR179CQ06252 201 aaKnown RBP2.27□□□□□ -2.05
RPN8YOR261C YPR147CQ06522 304 aaKnown RBP2.27□□□□□ -2.05
RPN8YOR261C RRP36Q12481 300 aaPredicted RBP2.27□□□□□ -2.05
RPN8YOR261C YLR462WO13556 202 aa2.26□□□□□ -2.05
RPN8YOR261C ADH3P07246 375 aaKnown RBP2.26□□□□□ -2.05
RPN8YOR261C MSF1P08425 469 aa2.26□□□□□ -2.05
RPN8YOR261C HOM6P31116 359 aaKnown RBP2.26□□□□□ -2.05
RPN8YOR261C YBR096WP38256 230 aa2.26□□□□□ -2.05
RPN8YOR261C YEL075CP39972 122 aa2.26□□□□□ -2.05
RPN8YOR261C FKS1P38631 1876 aaKnown RBP2.26□□□□□ -2.05
RPN8YOR261C SWI1P09547 1314 aa2.25□□□□□ -2.05
RPN8YOR261C Q0255P03881 472 aa2.25□□□□□ -2.05
RPN8YOR261C PUT1P09368 476 aa2.25□□□□□ -2.05
RPN8YOR261C YKR104WP0CE69 306 aa2.25□□□□□ -2.05
RPN8YOR261C RIB7P33312 244 aa2.25□□□□□ -2.05
RPN8YOR261C SDO1Q07953 250 aaKnown RBP2.25□□□□□ -2.05
RPN8YOR261C SYC1Q08553 188 aaPredicted RBP2.25□□□□□ -2.05
RPN8YOR261C BBP1Q12365 385 aa2.25□□□□□ -2.05
RPN8YOR261C MHT1Q12525 324 aa2.25□□□□□ -2.05
RPN8YOR261C GOS1P38736 223 aa2.24□□□□□ -2.05
RPN8YOR261C BIG1P38813 335 aa2.24□□□□□ -2.05
RPN8YOR261C ARC15P40518 154 aaRIP-Chip data2.24□□□□□ -2.05not detected
RPN8YOR261C MPP6P53725 186 aaPredicted RBP2.24□□□□□ -2.05
RPN8YOR261C GOT1Q03554 138 aa2.24□□□□□ -2.05
RPN8YOR261C KAP95Q06142 861 aaKnown RBP2.24□□□□□ -2.05
RPN8YOR261C YOR186WQ08560 144 aa2.24□□□□□ -2.05
RPN8YOR261C YHR032W-AP0C5N6 59 aa2.23□□□□□ -2.05
RPN8YOR261C MSA2P36157 363 aa2.23□□□□□ -2.05
RPN8YOR261C CTR2P38865 189 aa2.23□□□□□ -2.05
RPN8YOR261C YHB1P39676 399 aaKnown RBP2.23□□□□□ -2.05
RPN8YOR261C SNZ2P53824 298 aa2.23□□□□□ -2.05
RPN8YOR261C YHR125WP38831 101 aa2.22□□□□□ -2.05
RPN8YOR261C DAD3P69850 94 aa2.22□□□□□ -2.05
RPN8YOR261C YDR209CQ03480 137 aa2.22□□□□□ -2.05
RPN8YOR261C SPG4Q04438 115 aa2.22□□□□□ -2.05
RPN8YOR261C FAR8Q05040 523 aa2.22□□□□□ -2.05
RPN8YOR261C YPR098CQ06089 161 aa2.22□□□□□ -2.05
RPN8YOR261C BTS1Q12051 335 aa2.22□□□□□ -2.05
RPN8YOR261C COX5AP00424 153 aa2.21□□□□□ -2.06
RPN8YOR261C DOG1P38774 246 aa2.21□□□□□ -2.06
RPN8YOR261C AYR1P40471 297 aa2.21□□□□□ -2.06
RPN8YOR261C YGL159WP53110 370 aa2.21□□□□□ -2.06
RPN8YOR261C YLR030WQ07967 263 aa2.21□□□□□ -2.06
RPN8YOR261C BOL1Q3E793 110 aa2.21□□□□□ -2.06
RPN8YOR261C RNA15P25299 296 aaPredicted RBP2.2□□□□□ -2.06
RPN8YOR261C RPT5P33297 434 aaKnown RBP2.2□□□□□ -2.06
RPN8YOR261C MRPL39P36533 70 aa2.2□□□□□ -2.06
RPN8YOR261C USE1P53146 245 aa2.2□□□□□ -2.06
RPN8YOR261C PRM15Q03262 622 aa2.2□□□□□ -2.06
RPN8YOR261C YMR279CQ03263 540 aa2.2□□□□□ -2.06
RPN8YOR261C RRP40Q08285 240 aaKnown RBP2.2□□□□□ -2.06
RPN8YOR261C CSM4Q08955 156 aa2.2□□□□□ -2.06
RPN8YOR261C AKR2Q12013 749 aa2.2□□□□□ -2.06
RPN8YOR261C RAS2P01120 322 aaKnown RBP2.19□□□□□ -2.06
RPN8YOR261C ERG24P32462 438 aaKnown RBP2.19□□□□□ -2.06
RPN8YOR261C FZO1P38297 855 aa2.19□□□□□ -2.06
RPN8YOR261C YGR026WP53217 278 aa2.19□□□□□ -2.06
RPN8YOR261C YCT1Q12235 531 aa2.19□□□□□ -2.06
RPN8YOR261C SGE1P33335 543 aa2.18□□□□□ -2.06
RPN8YOR261C YFR054CP43622 192 aa2.18□□□□□ -2.06
RPN8YOR261C GTR2P53290 341 aa2.18□□□□□ -2.06
RPN8YOR261C YNL046WP53956 172 aa2.18□□□□□ -2.06
RPN8YOR261C INM2Q05533 292 aa2.18□□□□□ -2.06
RPN8YOR261C YPR172WQ06608 200 aa2.18□□□□□ -2.06
RPN8YOR261C RRS1Q08746 203 aaKnown RBP2.18□□□□□ -2.06
RPN8YOR261C YOL107WQ12239 342 aa2.18□□□□□ -2.06
RPN8YOR261C RSR1P13856 272 aa2.17□□□□□ -2.06
RPN8YOR261C SCL1P21243 252 aaKnown RBP2.17□□□□□ -2.06
RPN8YOR261C LSM4P40070 187 aaKnown RBP2.17□□□□□ -2.06
RPN8YOR261C MSH5Q12175 901 aa2.17□□□□□ -2.06
RPN8YOR261C YOR029WQ12243 111 aa2.17□□□□□ -2.06
RPN8YOR261C BFR1P38934 470 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 158.3 ms