RNA–Protein interactions for RNA: YOR217W

RFC1, Transcript of Subunit of heteropentameric Replication factor C (RF-C), yeast

Gene RFC1, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFC1	YOR217W	PPZ2	P33329	710 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	YHR078W	P38799	552 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	YGR149W	P48236	432 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	APS2	Q00381	147 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	DIG2	Q03373	323 aa	Known RBP	7.76	□□□□□ -1.17
RFC1	YOR217W	AIM36	Q03798	255 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	CSI2	Q08054	341 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	SPO12	P17123	173 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	ARO2	P28777	376 aa	Known RBP	7.76	□□□□□ -1.17
RFC1	YOR217W	MLF3	P32047	452 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	YEF1	P32622	495 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	SCD5	P34758	872 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	YHL026C	P38740	315 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	XBP1	P40489	647 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	YDL186W	P48568	277 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	YDR415C	Q04033	374 aa	Predicted RBP	7.76	□□□□□ -1.17
RFC1	YOR217W	SIZ1	Q04195	904 aa		7.76	□□□□□ -1.17
RFC1	YOR217W	YKR104W	P0CE69	306 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	MBR1	P23493	339 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	CEM1	P39525	442 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	AVT4	P50944	713 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	SAY1	P53324	424 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	SOK2	P53438	785 aa	Predicted RBP	7.75	□□□□□ -1.17
RFC1	YOR217W	AAD4	Q07747	329 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	RAD28	Q12021	506 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	TFC7	Q12415	435 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	CDC4	P07834	779 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	TKL2	P33315	681 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	YBR285W	P38354	144 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	YJL107C	P42947	387 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	7.75	□□□□□ -1.17	not detected
RFC1	YOR217W	GWT1	P47026	490 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	GRX8	Q05926	109 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	THI21	Q08975	551 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	DAP1	Q12091	152 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	YDR215C	Q12240	137 aa		7.75	□□□□□ -1.17
RFC1	YOR217W	YLR462W	O13556	202 aa		7.74	□□□□□ -1.17
RFC1	YOR217W	GAL80	P04387	435 aa		7.74	□□□□□ -1.17
RFC1	YOR217W	BAR1	P12630	587 aa		7.74	□□□□□ -1.17
RFC1	YOR217W	SPT15	P13393	240 aa	Known RBP	7.74	□□□□□ -1.17
RFC1	YOR217W	YBR096W	P38256	230 aa		7.74	□□□□□ -1.17
RFC1	YOR217W	SAS2	P40963	338 aa		7.74	□□□□□ -1.17
RFC1	YOR217W	SAL1	D6W196	494 aa		7.74	□□□□□ -1.17
RFC1	YOR217W	NOP1	P15646	327 aa	Known RBP	7.74	□□□□□ -1.17
RFC1	YOR217W	YHR130C	P38834	111 aa		7.74	□□□□□ -1.17
RFC1	YOR217W	MTM1	P53320	366 aa		7.74	□□□□□ -1.17
RFC1	YOR217W	BIO4	P53630	237 aa		7.74	□□□□□ -1.17
RFC1	YOR217W	PKR1	Q03880	122 aa	Known RBP	7.74	□□□□□ -1.17
RFC1	YOR217W	ENV7	Q12003	364 aa		7.74	□□□□□ -1.17
RFC1	YOR217W	FRE8	Q12209	686 aa		7.74	□□□□□ -1.17
RFC1	YOR217W	UTP23	Q12339	254 aa	Known RBP	7.74	□□□□□ -1.17
RFC1	YOR217W	DET1	Q99288	334 aa	Known RBP	7.74	□□□□□ -1.17
RFC1	YOR217W	NTF2	P33331	125 aa	Known RBP	7.73	□□□□□ -1.17
RFC1	YOR217W	SNM1	P40993	198 aa		7.73	□□□□□ -1.17
RFC1	YOR217W	YNL092W	P53934	400 aa		7.73	□□□□□ -1.17
RFC1	YOR217W	LEE1	Q02799	301 aa	Known RBP	7.73	□□□□□ -1.17
RFC1	YOR217W	YMR074C	Q04773	145 aa		7.73	□□□□□ -1.17
RFC1	YOR217W	SNT309	Q06091	175 aa	Predicted RBP	7.73	□□□□□ -1.17
RFC1	YOR217W	GPI11	Q06636	219 aa		7.73	□□□□□ -1.17
RFC1	YOR217W	AIM39	Q08223	395 aa		7.73	□□□□□ -1.17
RFC1	YOR217W	FDH1	Q08911	376 aa		7.73	□□□□□ -1.17
RFC1	YOR217W	YLR050C	Q12155	161 aa	Known RBP	7.73	□□□□□ -1.17
RFC1	YOR217W	CYC7	P00045	113 aa		7.73	□□□□□ -1.17
RFC1	YOR217W	RAD52	P06778	471 aa	Known RBP	7.73	□□□□□ -1.17
RFC1	YOR217W	FEN2	P25621	512 aa	Known RBP	7.73	□□□□□ -1.17
RFC1	YOR217W	HEM14	P40012	539 aa		7.73	□□□□□ -1.17
RFC1	YOR217W	GTS1	P40956	396 aa		7.73	□□□□□ -1.17
RFC1	YOR217W	NRG1	Q03125	231 aa		7.73	□□□□□ -1.17
RFC1	YOR217W	NKP2	Q06162	153 aa		7.73	□□□□□ -1.17
RFC1	YOR217W	YLR302C	O13544	120 aa		7.72	□□□□□ -1.17
RFC1	YOR217W	YLR415C	O13578	112 aa		7.72	□□□□□ -1.17
RFC1	YOR217W	URK1	P27515	501 aa		7.72	□□□□□ -1.17
RFC1	YOR217W	TOD6	P34219	525 aa		7.72	□□□□□ -1.17
RFC1	YOR217W	LYS12	P40495	371 aa	Known RBP	7.72	□□□□□ -1.17
RFC1	YOR217W	YJR012C	P47087	207 aa		7.72	□□□□□ -1.17
RFC1	YOR217W	MDM30	Q05930	598 aa		7.72	□□□□□ -1.17
RFC1	YOR217W	EMG1	Q06287	252 aa	Known RBP	7.72	□□□□□ -1.17
RFC1	YOR217W	YEA6	P39953	335 aa		7.72	□□□□□ -1.17
RFC1	YOR217W	SMX2	P40204	77 aa	Known RBP	7.72	□□□□□ -1.17
RFC1	YOR217W	GAT2	P40209	560 aa		7.72	□□□□□ -1.17
RFC1	YOR217W	TAM41	P53230	385 aa		7.72	□□□□□ -1.17
RFC1	YOR217W	VPS28	Q02767	242 aa		7.72	□□□□□ -1.17
RFC1	YOR217W	SAM4	Q08985	325 aa	Known RBP	7.72	□□□□□ -1.17
RFC1	YOR217W	SAM2	P19358	384 aa	Known RBP	7.71	□□□□□ -1.17
RFC1	YOR217W	IES6	P32617	166 aa		7.71	□□□□□ -1.17
RFC1	YOR217W	YHR035W	P38769	630 aa		7.71	□□□□□ -1.17
RFC1	YOR217W	GRX5	Q02784	150 aa		7.71	□□□□□ -1.17
RFC1	YOR217W	GEP5	Q12393	293 aa		7.71	□□□□□ -1.17
RFC1	YOR217W	YOS1	Q3E834	85 aa		7.71	□□□□□ -1.17
RFC1	YOR217W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	7.71	□□□□□ -1.18	not detected
RFC1	YOR217W	EMP24	P32803	203 aa	Known RBP	7.71	□□□□□ -1.18
RFC1	YOR217W	FSH1	P38777	243 aa	Known RBP	7.71	□□□□□ -1.18
RFC1	YOR217W	ELC1	Q03071	99 aa		7.71	□□□□□ -1.18
RFC1	YOR217W	ECI1	Q05871	280 aa		7.71	□□□□□ -1.18
RFC1	YOR217W	TEN1	Q07921	160 aa		7.71	□□□□□ -1.18
RFC1	YOR217W	TRM10	Q12400	293 aa		7.71	□□□□□ -1.18
RFC1	YOR217W	Q0142	Q9ZZW4	58 aa		7.71	□□□□□ -1.18
RFC1	YOR217W	ERD1	P16151	362 aa		7.7	□□□□□ -1.18
RFC1	YOR217W	MTC7	P32633	139 aa		7.7	□□□□□ -1.18
RFC1	YOR217W	HIS7	P33734	552 aa	Known RBP	7.7	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms