RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W DSN1P40568 576 aa2.04□□□□□ -2.08
VAM3YOR106W CTF19Q02732 369 aa2.04□□□□□ -2.08
VAM3YOR106W YLR179CQ06252 201 aaKnown RBP2.04□□□□□ -2.08
VAM3YOR106W FBA1P14540 359 aaKnown RBP2.03□□□□□ -2.08
VAM3YOR106W YDR124WQ04608 324 aa2.03□□□□□ -2.08
VAM3YOR106W Q0255P03881 472 aa2.02□□□□□ -2.09
VAM3YOR106W PEX4P29340 183 aa2.02□□□□□ -2.09
VAM3YOR106W RCY1P39531 840 aa2.02□□□□□ -2.09
VAM3YOR106W KAP114P53067 1004 aa2.02□□□□□ -2.09
VAM3YOR106W OST6Q03723 332 aa2.02□□□□□ -2.09
VAM3YOR106W YGR026WP53217 278 aa2.01□□□□□ -2.09
VAM3YOR106W YPR147CQ06522 304 aaKnown RBP2.01□□□□□ -2.09
VAM3YOR106W VPS3P23643 1011 aa2□□□□□ -2.09
VAM3YOR106W YHR125WP38831 101 aa2□□□□□ -2.09
VAM3YOR106W SMD3P43321 101 aaKnown RBP2□□□□□ -2.09
VAM3YOR106W YGL034CP53186 121 aa2□□□□□ -2.09
VAM3YOR106W YMR279CQ03263 540 aa2□□□□□ -2.09
VAM3YOR106W GOT1Q03554 138 aa2□□□□□ -2.09
VAM3YOR106W ATG17Q06410 417 aa2□□□□□ -2.09
VAM3YOR106W AKR2Q12013 749 aa2□□□□□ -2.09
VAM3YOR106W ATO3Q12359 275 aa2□□□□□ -2.09
VAM3YOR106W SNF8Q12483 233 aa2□□□□□ -2.09
VAM3YOR106W SWI1P09547 1314 aa1.99□□□□□ -2.09
VAM3YOR106W RAS2P01120 322 aaKnown RBP1.99□□□□□ -2.09
VAM3YOR106W CDC7P06243 507 aa1.99□□□□□ -2.09
VAM3YOR106W SCL1P21243 252 aaKnown RBP1.99□□□□□ -2.09
VAM3YOR106W QRI5P32344 111 aa1.99□□□□□ -2.09
VAM3YOR106W DOG1P38774 246 aa1.99□□□□□ -2.09
VAM3YOR106W YER189WP40104 122 aa1.99□□□□□ -2.09
VAM3YOR106W EMC2P47133 292 aaKnown RBP1.99□□□□□ -2.09
VAM3YOR106W FKS1P38631 1876 aaKnown RBP1.99□□□□□ -2.09
VAM3YOR106W YLR462WO13556 202 aa1.98□□□□□ -2.09
VAM3YOR106W YEL075CP39972 122 aa1.98□□□□□ -2.09
VAM3YOR106W VTC1P40046 129 aaRIP-Chip data1.98□□□□□ -2.09not detected
VAM3YOR106W MRPS8Q03799 155 aa1.98□□□□□ -2.09
VAM3YOR106W MRP1P10662 321 aaKnown RBP1.97□□□□□ -2.09
VAM3YOR106W CIS3P47001 227 aa1.97□□□□□ -2.09
VAM3YOR106W MRH4P53166 561 aa1.97□□□□□ -2.09
VAM3YOR106W SYC1Q08553 188 aaPredicted RBP1.97□□□□□ -2.09
VAM3YOR106W RPL24AP04449 155 aaKnown RBP1.96□□□□□ -2.1
VAM3YOR106W YOL162WP0CF19 215 aa1.96□□□□□ -2.1
VAM3YOR106W MDH3P32419 343 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
VAM3YOR106W VMA11P32842 164 aa1.96□□□□□ -2.1
VAM3YOR106W EBP2P36049 427 aaKnown RBP1.96□□□□□ -2.1
VAM3YOR106W BMT5P40493 336 aa1.96□□□□□ -2.1
VAM3YOR106W ERG25P53045 309 aa1.96□□□□□ -2.1
VAM3YOR106W ALG11P53954 548 aaKnown RBP1.96□□□□□ -2.1
VAM3YOR106W ERV25P54837 211 aaKnown RBP1.96□□□□□ -2.1
VAM3YOR106W FAR8Q05040 523 aa1.96□□□□□ -2.1
VAM3YOR106W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
VAM3YOR106W YKR104WP0CE69 306 aa1.95□□□□□ -2.1
VAM3YOR106W DSF1P0CX08 502 aa1.95□□□□□ -2.1
VAM3YOR106W YNR073CP0CX09 502 aa1.95□□□□□ -2.1
VAM3YOR106W MSA2P36157 363 aa1.95□□□□□ -2.1
VAM3YOR106W PRS2P38620 318 aaKnown RBP1.95□□□□□ -2.1
VAM3YOR106W COX5AP00424 153 aa1.94□□□□□ -2.1
VAM3YOR106W PHO88P38264 188 aaPredicted RBP1.94□□□□□ -2.1
VAM3YOR106W FZO1P38297 855 aa1.94□□□□□ -2.1
VAM3YOR106W SNZ3P43545 298 aa1.94□□□□□ -2.1
VAM3YOR106W YGR219WP53307 113 aa1.94□□□□□ -2.1
VAM3YOR106W RRP40Q08285 240 aaKnown RBP1.94□□□□□ -2.1
VAM3YOR106W COX2P00410 251 aa1.93□□□□□ -2.1
VAM3YOR106W MDH2P22133 377 aa1.93□□□□□ -2.1
VAM3YOR106W ERG24P32462 438 aaKnown RBP1.93□□□□□ -2.1
VAM3YOR106W JEN1P36035 616 aa1.93□□□□□ -2.1
VAM3YOR106W YER135CP40082 130 aa1.93□□□□□ -2.1
VAM3YOR106W PRM10P42946 383 aa1.93□□□□□ -2.1
VAM3YOR106W YGL159WP53110 370 aa1.93□□□□□ -2.1
VAM3YOR106W CYT2Q00873 224 aa1.93□□□□□ -2.1
VAM3YOR106W ADH6Q04894 360 aaKnown RBP1.93□□□□□ -2.1
VAM3YOR106W RPL9AP05738 191 aaKnown RBP1.92□□□□□ -2.1
VAM3YOR106W YKR045CP36138 183 aa1.92□□□□□ -2.1
VAM3YOR106W MRPL39P36533 70 aa1.92□□□□□ -2.1
VAM3YOR106W RRF1P38771 230 aa1.92□□□□□ -2.1
VAM3YOR106W DSE2P38844 325 aa1.92□□□□□ -2.1
VAM3YOR106W CTR2P38865 189 aa1.92□□□□□ -2.1
VAM3YOR106W RPL9BP51401 191 aaKnown RBP1.92□□□□□ -2.1
VAM3YOR106W YDR209CQ03480 137 aa1.92□□□□□ -2.1
VAM3YOR106W YPR098CQ06089 161 aa1.92□□□□□ -2.1
VAM3YOR106W YLR030WQ07967 263 aa1.92□□□□□ -2.1
VAM3YOR106W COQ10Q08058 207 aa1.92□□□□□ -2.1
VAM3YOR106W DCN1Q12395 269 aa1.92□□□□□ -2.1
VAM3YOR106W YHR022CP38763 256 aa1.91□□□□□ -2.1
VAM3YOR106W COX20Q04935 205 aa1.91□□□□□ -2.1
VAM3YOR106W DAL82P21705 255 aa1.9□□□□□ -2.11
VAM3YOR106W SGE1P33335 543 aa1.9□□□□□ -2.11
VAM3YOR106W MRPL37P36532 105 aa1.9□□□□□ -2.11
VAM3YOR106W PET100P38958 111 aa1.9□□□□□ -2.11
VAM3YOR106W SMB1P40018 196 aaKnown RBP1.9□□□□□ -2.11
VAM3YOR106W THO1P40040 218 aaKnown RBP1.9□□□□□ -2.11
VAM3YOR106W SPG4Q04438 115 aa1.9□□□□□ -2.11
VAM3YOR106W OAC1P32332 324 aa1.89□□□□□ -2.11
VAM3YOR106W ERV15P38312 142 aa1.89□□□□□ -2.11
VAM3YOR106W FIS1P40515 155 aa1.89□□□□□ -2.11
VAM3YOR106W RMR1P53060 241 aa1.89□□□□□ -2.11
VAM3YOR106W GTR2P53290 341 aa1.89□□□□□ -2.11
VAM3YOR106W INM2Q05533 292 aa1.89□□□□□ -2.11
VAM3YOR106W YKE4P40544 346 aa1.88□□□□□ -2.11
VAM3YOR106W YOR186WQ08560 144 aa1.88□□□□□ -2.11
VAM3YOR106W YPL257WQ08974 193 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms