RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W DDI1P40087 428 aa8.83□□□□□ -1
PRE6YOL038W YJR120WP47157 116 aa8.83□□□□□ -1
PRE6YOL038W EFM3P47163 339 aa8.83□□□□□ -1
PRE6YOL038W YKR005CQ02203 525 aa8.83□□□□□ -1
PRE6YOL038W PRP3Q03338 469 aaPredicted RBP8.83□□□□□ -1
PRE6YOL038W PRP11Q07350 266 aaPredicted RBP8.83□□□□□ -1
PRE6YOL038W FCY22Q12119 530 aa8.83□□□□□ -1
PRE6YOL038W PHO4P07270 312 aaKnown RBP8.82□□□□□ -1
PRE6YOL038W IES6P32617 166 aa8.82□□□□□ -1
PRE6YOL038W ALG14P38242 237 aa8.82□□□□□ -1
PRE6YOL038W SSH1P38353 490 aaKnown RBP8.82□□□□□ -1
PRE6YOL038W LNP1P38878 278 aa8.82□□□□□ -1
PRE6YOL038W ERJ5P43613 295 aaPredicted RBP8.82□□□□□ -1
PRE6YOL038W PAU12P53343 120 aa8.82□□□□□ -1
PRE6YOL038W SPR28Q04921 423 aa8.82□□□□□ -1
PRE6YOL038W TSR2Q06672 205 aaKnown RBP8.82□□□□□ -1
PRE6YOL038W FUN26P31381 517 aa8.81□□□□□ -1
PRE6YOL038W MTH1P35198 433 aa8.81□□□□□ -1
PRE6YOL038W MAK3Q03503 176 aa8.81□□□□□ -1
PRE6YOL038W YDR179W-AQ03983 463 aa8.81□□□□□ -1
PRE6YOL038W PIN3Q06449 215 aa8.81□□□□□ -1
PRE6YOL038W YDL009CQ12210 107 aa8.81□□□□□ -1
PRE6YOL038W HUT1Q12520 339 aa8.81□□□□□ -1
PRE6YOL038W TAL1P15019 335 aaKnown RBP8.8□□□□□ -1
PRE6YOL038W NVJ1P38881 321 aa8.8□□□□□ -1
PRE6YOL038W BUD8P41698 603 aa8.8□□□□□ -1
PRE6YOL038W PIR5P46999 287 aa8.8□□□□□ -1
PRE6YOL038W AVT4P50944 713 aa8.8□□□□□ -1
PRE6YOL038W IRC25Q07951 179 aa8.8□□□□□ -1
PRE6YOL038W TGS1Q12052 315 aa8.8□□□□□ -1
PRE6YOL038W TDH2P00358 332 aaKnown RBP8.79□□□□□ -1
PRE6YOL038W REP2P03872 296 aa8.79□□□□□ -1
PRE6YOL038W COX9P07255 59 aa8.79□□□□□ -1
PRE6YOL038W MRP1P10662 321 aaKnown RBP8.79□□□□□ -1
PRE6YOL038W CNE1P27825 502 aa8.79□□□□□ -1
PRE6YOL038W IMP1P28627 190 aa8.79□□□□□ -1
PRE6YOL038W DOA4P32571 926 aa8.79□□□□□ -1
PRE6YOL038W PAU24P38155 120 aa8.79□□□□□ -1
PRE6YOL038W PMT5P52867 743 aa8.79□□□□□ -1
PRE6YOL038W YGL204CP53089 101 aa8.79□□□□□ -1
PRE6YOL038W TMA10Q06177 86 aa8.79□□□□□ -1
PRE6YOL038W YPR1Q12458 312 aa8.79□□□□□ -1
PRE6YOL038W ADK1P07170 222 aaKnown RBP8.78□□□□□ -1
PRE6YOL038W ACH1P32316 526 aa8.78□□□□□ -1
PRE6YOL038W MTC7P32633 139 aa8.78□□□□□ -1
PRE6YOL038W VPS17P32913 551 aa8.78□□□□□ -1
PRE6YOL038W SLI1P53304 468 aa8.78□□□□□ -1
PRE6YOL038W ARG5,6Q01217 863 aa8.78□□□□□ -1
PRE6YOL038W TY1A-NL1Q12391 440 aaKnown RBP8.78□□□□□ -1
PRE6YOL038W CDC28P00546 298 aaKnown RBP8.77□□□□□ -1.01
PRE6YOL038W VMA3P25515 160 aa8.77□□□□□ -1.01
PRE6YOL038W MTC2P34246 357 aa8.77□□□□□ -1.01
PRE6YOL038W YKL102CP34249 101 aa8.77□□□□□ -1.01
PRE6YOL038W POP6P53218 158 aa8.77□□□□□ -1.01
PRE6YOL038W GRX3Q03835 250 aa8.77□□□□□ -1.01
PRE6YOL038W MGR3Q04472 501 aa8.77□□□□□ -1.01
PRE6YOL038W MDM36Q06820 579 aa8.77□□□□□ -1.01
PRE6YOL038W EAF3Q12432 401 aa8.77□□□□□ -1.01
PRE6YOL038W RPL24BP24000 155 aaKnown RBP8.76□□□□□ -1.01
PRE6YOL038W AHC2P25649 128 aa8.76□□□□□ -1.01
PRE6YOL038W ERG24P32462 438 aaKnown RBP8.76□□□□□ -1.01
PRE6YOL038W FMP23P38231 175 aa8.76□□□□□ -1.01
PRE6YOL038W YFL015CP43578 164 aa8.76□□□□□ -1.01
PRE6YOL038W ORT1Q12375 292 aa8.76□□□□□ -1.01
PRE6YOL038W CDC31P06704 161 aaKnown RBP8.75□□□□□ -1.01
PRE6YOL038W MATALPHA1P0CY06 175 aa8.75□□□□□ -1.01
PRE6YOL038W HMLALPHA1P0CY07 175 aa8.75□□□□□ -1.01
PRE6YOL038W PRE7P23724 241 aaKnown RBP8.75□□□□□ -1.01
PRE6YOL038W DPB2P24482 689 aaPredicted RBP8.75□□□□□ -1.01
PRE6YOL038W ARO7P32178 256 aa8.75□□□□□ -1.01
PRE6YOL038W MRPL36P36531 177 aa8.75□□□□□ -1.01
PRE6YOL038W RTT105P40063 208 aa8.75□□□□□ -1.01
PRE6YOL038W SSN8P47821 323 aa8.75□□□□□ -1.01
PRE6YOL038W SCW11P53189 542 aa8.75□□□□□ -1.01
PRE6YOL038W YMR166CQ03829 368 aa8.75□□□□□ -1.01
PRE6YOL038W YMR254CQ04838 102 aa8.75□□□□□ -1.01
PRE6YOL038W LUC7Q07508 261 aaPredicted RBP8.75□□□□□ -1.01
PRE6YOL038W GRC3Q07845 632 aa8.75□□□□□ -1.01
PRE6YOL038W MDN1Q12019 4910 aaKnown RBP8.75□□□□□ -1.01
PRE6YOL038W RPL5P26321 297 aaKnown RBP8.74□□□□□ -1.01
PRE6YOL038W ARO4P32449 370 aaKnown RBP8.74□□□□□ -1.01
PRE6YOL038W UFD1P53044 361 aa8.74□□□□□ -1.01
PRE6YOL038W SRL4Q03085 281 aa8.74□□□□□ -1.01
PRE6YOL038W GPN3Q06543 272 aa8.74□□□□□ -1.01
PRE6YOL038W MRX9Q07349 420 aaKnown RBP8.74□□□□□ -1.01
PRE6YOL038W YLR099W-AQ3E798 87 aa8.74□□□□□ -1.01
PRE6YOL038W YEL009C-AA0A023PZF2 135 aa8.73□□□□□ -1.01
PRE6YOL038W RCN1P36054 211 aa8.73□□□□□ -1.01
PRE6YOL038W JLP2P40206 208 aa8.73□□□□□ -1.01
PRE6YOL038W MID1P41821 548 aa8.73□□□□□ -1.01
PRE6YOL038W YAE1P47118 141 aaPredicted RBP8.73□□□□□ -1.01
PRE6YOL038W XPT1P47165 209 aa8.73□□□□□ -1.01
PRE6YOL038W BUD25P85052 153 aa8.73□□□□□ -1.01
PRE6YOL038W YPL067CQ02754 198 aa8.73□□□□□ -1.01
PRE6YOL038W RRP17Q04031 235 aaPredicted RBP8.73□□□□□ -1.01
PRE6YOL038W YLR283WQ05867 314 aa8.73□□□□□ -1.01
PRE6YOL038W PEX30Q06169 523 aa8.73□□□□□ -1.01
PRE6YOL038W SRL1Q08673 210 aa8.73□□□□□ -1.01
PRE6YOL038W RAX2Q12465 1220 aa8.73□□□□□ -1.01
PRE6YOL038W YLR358CO13565 187 aa8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms