RNA–Protein interactions for RNA: YMR180C

CTL1, Transcript of RNA 5'-triphosphatase, localizes to both the nucleus and cytoplasm, yeastyeast

Gene CTL1, Length 963 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTL1YMR180C SEC22P22214 214 aa2.35□□□□□ -2.03
CTL1YMR180C VPS3P23643 1011 aa2.35□□□□□ -2.03
CTL1YMR180C PET100P38958 111 aa2.35□□□□□ -2.03
CTL1YMR180C SMB1P40018 196 aaKnown RBP2.35□□□□□ -2.03
CTL1YMR180C SNF8Q12483 233 aa2.35□□□□□ -2.03
CTL1YMR180C SWI1P09547 1314 aa2.35□□□□□ -2.03
CTL1YMR180C DOA4P32571 926 aa2.34□□□□□ -2.03
CTL1YMR180C JEN1P36035 616 aa2.34□□□□□ -2.03
CTL1YMR180C RCN1P36054 211 aa2.34□□□□□ -2.03
CTL1YMR180C SNZ3P43545 298 aa2.34□□□□□ -2.03
CTL1YMR180C SNX4P47057 423 aa2.34□□□□□ -2.03
CTL1YMR180C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
CTL1YMR180C CTF19Q02732 369 aa2.34□□□□□ -2.03
CTL1YMR180C BEM2P39960 2167 aaKnown RBP2.34□□□□□ -2.04
CTL1YMR180C MRP1P10662 321 aaKnown RBP2.33□□□□□ -2.04
CTL1YMR180C DAL82P21705 255 aa2.33□□□□□ -2.04
CTL1YMR180C RIB7P33312 244 aa2.33□□□□□ -2.04
CTL1YMR180C YBR096WP38256 230 aa2.33□□□□□ -2.04
CTL1YMR180C SMD3P43321 101 aaKnown RBP2.33□□□□□ -2.04
CTL1YMR180C BAT2P47176 376 aaKnown RBP2.33□□□□□ -2.04
CTL1YMR180C YPR147CQ06522 304 aaKnown RBP2.33□□□□□ -2.04
CTL1YMR180C COQ10Q08058 207 aa2.33□□□□□ -2.04
CTL1YMR180C RRP36Q12481 300 aaPredicted RBP2.33□□□□□ -2.04
CTL1YMR180C CCA1P21269 546 aa2.32□□□□□ -2.04
CTL1YMR180C GLG2P47011 380 aa2.32□□□□□ -2.04
CTL1YMR180C ADH6Q04894 360 aaKnown RBP2.32□□□□□ -2.04
CTL1YMR180C BBP1Q12365 385 aa2.32□□□□□ -2.04
CTL1YMR180C YHR032W-AP0C5N6 59 aa2.31□□□□□ -2.04
CTL1YMR180C SSH1P38353 490 aaKnown RBP2.31□□□□□ -2.04
CTL1YMR180C MRH4P53166 561 aa2.31□□□□□ -2.04
CTL1YMR180C MPP6P53725 186 aaPredicted RBP2.31□□□□□ -2.04
CTL1YMR180C ATG17Q06410 417 aa2.31□□□□□ -2.04
CTL1YMR180C HOM6P31116 359 aaKnown RBP2.3□□□□□ -2.04
CTL1YMR180C MRX3P38172 270 aa2.3□□□□□ -2.04
CTL1YMR180C BIG1P38813 335 aa2.3□□□□□ -2.04
CTL1YMR180C YDR124WQ04608 324 aa2.3□□□□□ -2.04
CTL1YMR180C MSF1P08425 469 aa2.29□□□□□ -2.04
CTL1YMR180C YKR104WP0CE69 306 aa2.29□□□□□ -2.04
CTL1YMR180C MSA2P36157 363 aa2.29□□□□□ -2.04
CTL1YMR180C COS8P38723 381 aa2.29□□□□□ -2.04
CTL1YMR180C YER189WP40104 122 aa2.29□□□□□ -2.04
CTL1YMR180C ASI3P53983 676 aa2.29□□□□□ -2.04
CTL1YMR180C KAP95Q06142 861 aaKnown RBP2.29□□□□□ -2.04
CTL1YMR180C PUT1P09368 476 aa2.28□□□□□ -2.04
CTL1YMR180C YUH1P35127 236 aa2.28□□□□□ -2.04
CTL1YMR180C GOS1P38736 223 aa2.28□□□□□ -2.04
CTL1YMR180C THO1P40040 218 aaKnown RBP2.28□□□□□ -2.04
CTL1YMR180C SNZ2P53824 298 aa2.28□□□□□ -2.04
CTL1YMR180C RRN5Q02983 363 aa2.28□□□□□ -2.04
CTL1YMR180C GOT1Q03554 138 aa2.28□□□□□ -2.04
CTL1YMR180C SDO1Q07953 250 aaKnown RBP2.28□□□□□ -2.04
CTL1YMR180C SYC1Q08553 188 aaPredicted RBP2.28□□□□□ -2.04
CTL1YMR180C BTS1Q12051 335 aa2.28□□□□□ -2.04
CTL1YMR180C MHT1Q12525 324 aa2.28□□□□□ -2.04
CTL1YMR180C FKS1P38631 1876 aaKnown RBP2.28□□□□□ -2.04
CTL1YMR180C INO80P53115 1489 aa2.27□□□□□ -2.05
CTL1YMR180C YLR462WO13556 202 aa2.27□□□□□ -2.05
CTL1YMR180C Q0255P03881 472 aa2.27□□□□□ -2.05
CTL1YMR180C RPT5P33297 434 aaKnown RBP2.27□□□□□ -2.05
CTL1YMR180C YHR125WP38831 101 aa2.27□□□□□ -2.05
CTL1YMR180C CTR2P38865 189 aa2.27□□□□□ -2.05
CTL1YMR180C YEL075CP39972 122 aa2.27□□□□□ -2.05
CTL1YMR180C ARC15P40518 154 aaRIP-Chip data2.27□□□□□ -2.05not detected
CTL1YMR180C YDR209CQ03480 137 aa2.27□□□□□ -2.05
CTL1YMR180C ADH3P07246 375 aaKnown RBP2.26□□□□□ -2.05
CTL1YMR180C LIA1P47120 325 aaKnown RBP2.26□□□□□ -2.05
CTL1YMR180C SPG4Q04438 115 aa2.26□□□□□ -2.05
CTL1YMR180C YPR098CQ06089 161 aa2.26□□□□□ -2.05
CTL1YMR180C YLR030WQ07967 263 aa2.26□□□□□ -2.05
CTL1YMR180C RRP40Q08285 240 aaKnown RBP2.26□□□□□ -2.05
CTL1YMR180C YOR186WQ08560 144 aa2.26□□□□□ -2.05
CTL1YMR180C YOL107WQ12239 342 aa2.26□□□□□ -2.05
CTL1YMR180C MED4Q12343 284 aa2.26□□□□□ -2.05
CTL1YMR180C RAS2P01120 322 aaKnown RBP2.25□□□□□ -2.05
CTL1YMR180C YHB1P39676 399 aaKnown RBP2.25□□□□□ -2.05
CTL1YMR180C YGL159WP53110 370 aa2.25□□□□□ -2.05
CTL1YMR180C COX5AP00424 153 aa2.24□□□□□ -2.05
CTL1YMR180C ERG24P32462 438 aaKnown RBP2.24□□□□□ -2.05
CTL1YMR180C SGE1P33335 543 aa2.24□□□□□ -2.05
CTL1YMR180C NUP84P52891 726 aa2.24□□□□□ -2.05
CTL1YMR180C RUD3Q12234 484 aaKnown RBP2.24□□□□□ -2.05
CTL1YMR180C YOR029WQ12243 111 aa2.24□□□□□ -2.05
CTL1YMR180C RNA15P25299 296 aaPredicted RBP2.23□□□□□ -2.05
CTL1YMR180C LSM4P40070 187 aaKnown RBP2.23□□□□□ -2.05
CTL1YMR180C YFR054CP43622 192 aa2.23□□□□□ -2.05
CTL1YMR180C USE1P53146 245 aa2.23□□□□□ -2.05
CTL1YMR180C YNL046WP53956 172 aa2.23□□□□□ -2.05
CTL1YMR180C FAR8Q05040 523 aa2.23□□□□□ -2.05
CTL1YMR180C RRT8Q08219 342 aa2.23□□□□□ -2.05
CTL1YMR180C RRS1Q08746 203 aaKnown RBP2.23□□□□□ -2.05
CTL1YMR180C AKR2Q12013 749 aa2.23□□□□□ -2.05
CTL1YMR180C RSR1P13856 272 aa2.22□□□□□ -2.05
CTL1YMR180C MRPL39P36533 70 aa2.22□□□□□ -2.05
CTL1YMR180C FZO1P38297 855 aa2.21□□□□□ -2.06
CTL1YMR180C DOG1P38774 246 aa2.21□□□□□ -2.06
CTL1YMR180C AYR1P40471 297 aa2.21□□□□□ -2.06
CTL1YMR180C MRPL50P53724 139 aa2.21□□□□□ -2.06
CTL1YMR180C DAD3P69850 94 aa2.21□□□□□ -2.06
CTL1YMR180C PRM15Q03262 622 aa2.21□□□□□ -2.06
CTL1YMR180C YMR279CQ03263 540 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms