RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C VMA11P32842 164 aa3.91□□□□□ -1.78
CCS1YMR038C RPL32P38061 130 aaKnown RBP3.91□□□□□ -1.78
CCS1YMR038C RIB1P38066 345 aa3.91□□□□□ -1.78
CCS1YMR038C HEK2P38199 381 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78 RIP-Chip
CCS1YMR038C LAG1P38703 411 aa3.91□□□□□ -1.78
CCS1YMR038C RCY1P39531 840 aa3.91□□□□□ -1.78
CCS1YMR038C SGN1P40561 250 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
CCS1YMR038C POP1P41812 875 aa3.91□□□□□ -1.78
CCS1YMR038C GET1P53192 235 aa3.91□□□□□ -1.78
CCS1YMR038C SPR6Q01684 191 aa3.91□□□□□ -1.78
CCS1YMR038C MSS11Q03825 758 aa3.91□□□□□ -1.78
CCS1YMR038C SNT309Q06091 175 aaPredicted RBP3.91□□□□□ -1.78
CCS1YMR038C IPK1Q06667 281 aa3.91□□□□□ -1.78
CCS1YMR038C SSK1Q07084 712 aa3.91□□□□□ -1.78
CCS1YMR038C MIM1Q08176 113 aa3.91□□□□□ -1.78
CCS1YMR038C SNX3Q08826 162 aaKnown RBP3.91□□□□□ -1.78
CCS1YMR038C SPC3Q12133 184 aa3.91□□□□□ -1.78
CCS1YMR038C MCT1Q12283 360 aa3.91□□□□□ -1.78
CCS1YMR038C ERP4Q12450 207 aa3.91□□□□□ -1.78
CCS1YMR038C YGR035W-AQ45U48 73 aa3.91□□□□□ -1.78
CCS1YMR038C FSH3Q99369 266 aa3.91□□□□□ -1.78
CCS1YMR038C MDN1Q12019 4910 aaKnown RBP3.91□□□□□ -1.78
CCS1YMR038C CMK2P22517 447 aa3.9□□□□□ -1.79
CCS1YMR038C CDC10P25342 322 aaKnown RBP3.9□□□□□ -1.79
CCS1YMR038C SKG1P36169 355 aa3.9□□□□□ -1.79
CCS1YMR038C RTC2P38279 296 aa3.9□□□□□ -1.79
CCS1YMR038C GLR1P41921 483 aaKnown RBP3.9□□□□□ -1.79
CCS1YMR038C PFS2P42841 465 aaKnown RBP3.9□□□□□ -1.79
CCS1YMR038C COS1P53822 381 aa3.9□□□□□ -1.79
CCS1YMR038C APJ1P53940 528 aa3.9□□□□□ -1.79
CCS1YMR038C GMC1Q04399 608 aa3.9□□□□□ -1.79
CCS1YMR038C YCL048W-AQ2V2Q2 79 aa3.9□□□□□ -1.79
CCS1YMR038C RPC40P07703 335 aaKnown RBP3.89□□□□□ -1.79
CCS1YMR038C NFT1P0CE68 1218 aa3.89□□□□□ -1.79
CCS1YMR038C RPS23AP0CX29 145 aaKnown RBP3.89□□□□□ -1.79
CCS1YMR038C RPS23BP0CX30 145 aa3.89□□□□□ -1.79
CCS1YMR038C ELO2P25358 347 aa3.89□□□□□ -1.79
CCS1YMR038C GLC7P32598 312 aaKnown RBP3.89□□□□□ -1.79
CCS1YMR038C ECM8P38246 354 aa3.89□□□□□ -1.79
CCS1YMR038C CTR2P38865 189 aa3.89□□□□□ -1.79
CCS1YMR038C MAM33P40513 266 aa3.89□□□□□ -1.79
CCS1YMR038C RRN9P53437 365 aa3.89□□□□□ -1.79
CCS1YMR038C BNA7Q04066 261 aa3.89□□□□□ -1.79
CCS1YMR038C YDR387CQ04162 555 aa3.89□□□□□ -1.79
CCS1YMR038C YMR087WQ04299 284 aa3.89□□□□□ -1.79
CCS1YMR038C PEX12Q04370 399 aa3.89□□□□□ -1.79
CCS1YMR038C YMR317WQ04893 1140 aa3.89□□□□□ -1.79
CCS1YMR038C BCP1Q06338 283 aa3.89□□□□□ -1.79
CCS1YMR038C APC2Q12440 853 aa3.89□□□□□ -1.79
CCS1YMR038C YDL007C-AQ2V2Q0 85 aa3.89□□□□□ -1.79
CCS1YMR038C YJR112W-AQ3E743 109 aa3.89□□□□□ -1.79
CCS1YMR038C RPL39P04650 51 aa3.88□□□□□ -1.79
CCS1YMR038C OPI3P05375 206 aa3.88□□□□□ -1.79
CCS1YMR038C CIN4P39110 191 aa3.88□□□□□ -1.79
CCS1YMR038C FLX1P40464 311 aa3.88□□□□□ -1.79
CCS1YMR038C STB1P42845 420 aa3.88□□□□□ -1.79
CCS1YMR038C YJL055WP47044 245 aa3.88□□□□□ -1.79
CCS1YMR038C HMS2P47175 358 aa3.88□□□□□ -1.79
CCS1YMR038C MIG2P53035 382 aa3.88□□□□□ -1.79
CCS1YMR038C YIP5P53108 310 aa3.88□□□□□ -1.79
CCS1YMR038C RMD9P53140 646 aaKnown RBP3.88□□□□□ -1.79
CCS1YMR038C ASI3P53983 676 aa3.88□□□□□ -1.79
CCS1YMR038C PET191Q02772 108 aa3.88□□□□□ -1.79
CCS1YMR038C NFI1Q12216 726 aa3.88□□□□□ -1.79
CCS1YMR038C YLR126CQ12288 251 aa3.88□□□□□ -1.79
CCS1YMR038C COX5BP00425 151 aa3.87□□□□□ -1.79
CCS1YMR038C MRS3P10566 314 aa3.87□□□□□ -1.79
CCS1YMR038C CLG1P35190 452 aa3.87□□□□□ -1.79
CCS1YMR038C RBG1P39729 369 aa3.87□□□□□ -1.79
CCS1YMR038C YGR168CP53293 376 aa3.87□□□□□ -1.79
CCS1YMR038C YNL046WP53956 172 aa3.87□□□□□ -1.79
CCS1YMR038C SAM50P53969 484 aa3.87□□□□□ -1.79
CCS1YMR038C NUP49Q02199 472 aa3.87□□□□□ -1.79
CCS1YMR038C ACL4Q03771 387 aa3.87□□□□□ -1.79
CCS1YMR038C SPC2Q04969 178 aa3.87□□□□□ -1.79
CCS1YMR038C IRC25Q07951 179 aa3.87□□□□□ -1.79
CCS1YMR038C YLR108CQ12259 485 aa3.87□□□□□ -1.79
CCS1YMR038C ADF1Q2V2Q1 113 aa3.87□□□□□ -1.79
CCS1YMR038C RPL6BP05739 176 aaKnown RBP3.86□□□□□ -1.79
CCS1YMR038C STE18P18852 110 aa3.86□□□□□ -1.79
CCS1YMR038C SNF6P18888 332 aa3.86□□□□□ -1.79
CCS1YMR038C APA2P22108 325 aa3.86□□□□□ -1.79
CCS1YMR038C KRR1P25586 316 aaPredicted RBP3.86□□□□□ -1.79
CCS1YMR038C ASF2P32448 525 aaPredicted RBP3.86□□□□□ -1.79
CCS1YMR038C DPH5P32469 300 aaPredicted RBP3.86□□□□□ -1.79
CCS1YMR038C PDX3P38075 228 aaKnown RBP3.86□□□□□ -1.79
CCS1YMR038C DIM1P41819 318 aaKnown RBP3.86□□□□□ -1.79
CCS1YMR038C TMA22P47089 198 aaPredicted RBP3.86□□□□□ -1.79
CCS1YMR038C MDE1P47095 244 aa3.86□□□□□ -1.79
CCS1YMR038C YNL095CP53932 642 aa3.86□□□□□ -1.79
CCS1YMR038C YMR102CQ03177 834 aa3.86□□□□□ -1.79
CCS1YMR038C RRP9Q06506 573 aaKnown RBP3.86□□□□□ -1.79
CCS1YMR038C YDL114WQ07530 308 aa3.86□□□□□ -1.79
CCS1YMR038C RRS1Q08746 203 aaKnown RBP3.86□□□□□ -1.79
CCS1YMR038C USB1Q12208 290 aaKnown RBP3.86□□□□□ -1.79
CCS1YMR038C YMR230W-AQ3E7B5 62 aa3.86□□□□□ -1.79
CCS1YMR038C GCN4P03069 281 aa3.85□□□□□ -1.79
CCS1YMR038C MSW1P04803 379 aa3.85□□□□□ -1.79
CCS1YMR038C PDE2P06776 526 aa3.85□□□□□ -1.79
CCS1YMR038C RAD52P06778 471 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms