RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W COG3P40094 801 aa1.37□□□□□ -2.19
SEC22YLR268W TIF34P40217 347 aaKnown RBP1.37□□□□□ -2.19
SEC22YLR268W MRH4P53166 561 aa1.37□□□□□ -2.19
SEC22YLR268W YNL134CP53912 376 aaKnown RBP1.37□□□□□ -2.19
SEC22YLR268W GOT1Q03554 138 aa1.37□□□□□ -2.19
SEC22YLR268W SPG4Q04438 115 aa1.37□□□□□ -2.19
SEC22YLR268W SPO77Q06134 477 aa1.37□□□□□ -2.19
SEC22YLR268W SYC1Q08553 188 aaPredicted RBP1.37□□□□□ -2.19
SEC22YLR268W CSM4Q08955 156 aa1.37□□□□□ -2.19
SEC22YLR268W TY3A-GQ12173 290 aa1.37□□□□□ -2.19
SEC22YLR268W YOR029WQ12243 111 aa1.37□□□□□ -2.19
SEC22YLR268W MED4Q12343 284 aa1.37□□□□□ -2.19
SEC22YLR268W TY3A-IQ99219 290 aa1.37□□□□□ -2.19
SEC22YLR268W CLB6P32943 380 aa1.36□□□□□ -2.19
SEC22YLR268W SGE1P33335 543 aa1.36□□□□□ -2.19
SEC22YLR268W YHB1P39676 399 aaKnown RBP1.36□□□□□ -2.19
SEC22YLR268W SNZ3P43545 298 aa1.36□□□□□ -2.19
SEC22YLR268W GLG2P47011 380 aa1.36□□□□□ -2.19
SEC22YLR268W CAB4P53332 305 aa1.36□□□□□ -2.19
SEC22YLR268W RHO3Q00245 231 aaKnown RBP1.36□□□□□ -2.19
SEC22YLR268W RRN5Q02983 363 aa1.36□□□□□ -2.19
SEC22YLR268W SUE1Q06524 206 aa1.36□□□□□ -2.19
SEC22YLR268W RDS3Q06835 107 aaPredicted RBP1.36□□□□□ -2.19
SEC22YLR268W COQ10Q08058 207 aa1.36□□□□□ -2.19
SEC22YLR268W RRS1Q08746 203 aaKnown RBP1.36□□□□□ -2.19
SEC22YLR268W MSH5Q12175 901 aa1.36□□□□□ -2.19
SEC22YLR268W SGA1P08019 549 aa1.35□□□□□ -2.19
SEC22YLR268W SNF6P18888 332 aa1.35□□□□□ -2.19
SEC22YLR268W MRPL39P36533 70 aa1.35□□□□□ -2.19
SEC22YLR268W YBR096WP38256 230 aa1.35□□□□□ -2.19
SEC22YLR268W YHL026CP38740 315 aa1.35□□□□□ -2.19
SEC22YLR268W THO1P40040 218 aaKnown RBP1.35□□□□□ -2.19
SEC22YLR268W MRPL49P40858 161 aaPredicted RBP1.35□□□□□ -2.19
SEC22YLR268W OST2P46964 130 aa1.35□□□□□ -2.19
SEC22YLR268W JHD2P47156 728 aaPredicted RBP1.35□□□□□ -2.19
SEC22YLR268W YJR146WP47174 117 aa1.35□□□□□ -2.19
SEC22YLR268W YGL034CP53186 121 aa1.35□□□□□ -2.19
SEC22YLR268W MRPL50P53724 139 aa1.35□□□□□ -2.19
SEC22YLR268W CTF19Q02732 369 aa1.35□□□□□ -2.19
SEC22YLR268W PEX12Q04370 399 aa1.35□□□□□ -2.19
SEC22YLR268W YLR179CQ06252 201 aaKnown RBP1.35□□□□□ -2.19
SEC22YLR268W PAM18Q07914 168 aa1.35□□□□□ -2.19
SEC22YLR268W VPS68Q12016 184 aa1.35□□□□□ -2.19
SEC22YLR268W YCT1Q12235 531 aa1.35□□□□□ -2.19
SEC22YLR268W SNU23Q12368 194 aaPredicted RBP1.35□□□□□ -2.19
SEC22YLR268W EMP46Q12396 444 aa1.35□□□□□ -2.19
SEC22YLR268W ATG31Q12421 196 aa1.35□□□□□ -2.19
SEC22YLR268W SAS5Q99314 248 aa1.35□□□□□ -2.19
SEC22YLR268W SWI1P09547 1314 aa1.35□□□□□ -2.19
SEC22YLR268W EHD3P28817 500 aa1.34□□□□□ -2.19
SEC22YLR268W GOS1P38736 223 aa1.34□□□□□ -2.19
SEC22YLR268W BFR1P38934 470 aaKnown RBP RIP-Chip data1.34□□□□□ -2.19not detected
SEC22YLR268W MNN5P46982 586 aa1.34□□□□□ -2.19
SEC22YLR268W YJR079WP47126 109 aa1.34□□□□□ -2.19
SEC22YLR268W SNZ2P53824 298 aa1.34□□□□□ -2.19
SEC22YLR268W SLM2P53955 656 aa1.34□□□□□ -2.19
SEC22YLR268W SRL4Q03085 281 aa1.34□□□□□ -2.19
SEC22YLR268W RSM10Q03201 203 aa1.34□□□□□ -2.19
SEC22YLR268W BBP1Q12365 385 aa1.34□□□□□ -2.19
SEC22YLR268W TCP1P12612 559 aaKnown RBP1.33□□□□□ -2.2
SEC22YLR268W SCO1P23833 295 aa1.33□□□□□ -2.2
SEC22YLR268W RCN1P36054 211 aa1.33□□□□□ -2.2
SEC22YLR268W COS8P38723 381 aa1.33□□□□□ -2.2
SEC22YLR268W YER189WP40104 122 aa1.33□□□□□ -2.2
SEC22YLR268W FMC1P40491 155 aa1.33□□□□□ -2.2
SEC22YLR268W HOC1P47124 396 aa1.33□□□□□ -2.2
SEC22YLR268W COS6P53344 381 aa1.33□□□□□ -2.2
SEC22YLR268W PET117Q02771 107 aa1.33□□□□□ -2.2
SEC22YLR268W KRE28Q04431 385 aa1.33□□□□□ -2.2
SEC22YLR268W YOR186WQ08560 144 aa1.33□□□□□ -2.2
SEC22YLR268W YOR283WQ12040 230 aaKnown RBP1.33□□□□□ -2.2
SEC22YLR268W EMC6Q12431 108 aa1.33□□□□□ -2.2
SEC22YLR268W YLR462WO13556 202 aa1.32□□□□□ -2.2
SEC22YLR268W ERG24P32462 438 aaKnown RBP1.32□□□□□ -2.2
SEC22YLR268W MSN4P33749 630 aa1.32□□□□□ -2.2
SEC22YLR268W YHR127WP38833 243 aaKnown RBP1.32□□□□□ -2.2
SEC22YLR268W YEL075CP39972 122 aa1.32□□□□□ -2.2
SEC22YLR268W ARC15P40518 154 aaRIP-Chip data1.32□□□□□ -2.2not detected
SEC22YLR268W LIA1P47120 325 aaKnown RBP1.32□□□□□ -2.2
SEC22YLR268W CGI121Q03705 181 aaKnown RBP1.32□□□□□ -2.2
SEC22YLR268W FAR8Q05040 523 aa1.32□□□□□ -2.2
SEC22YLR268W SEI1Q06058 285 aa1.32□□□□□ -2.2
SEC22YLR268W YLR126CQ12288 251 aa1.32□□□□□ -2.2
SEC22YLR268W CFT1Q06632 1357 aaKnown RBP1.32□□□□□ -2.2
SEC22YLR268W CCA1P21269 546 aa1.31□□□□□ -2.2
SEC22YLR268W MRPL25P23369 157 aa1.31□□□□□ -2.2
SEC22YLR268W YCR016WP25617 290 aaKnown RBP1.31□□□□□ -2.2
SEC22YLR268W SCM4P32564 187 aa1.31□□□□□ -2.2
SEC22YLR268W SRB4P32569 687 aa1.31□□□□□ -2.2
SEC22YLR268W MSA2P36157 363 aa1.31□□□□□ -2.2
SEC22YLR268W YMR144WP40214 342 aaKnown RBP1.31□□□□□ -2.2
SEC22YLR268W RMR1P53060 241 aa1.31□□□□□ -2.2
SEC22YLR268W YGL159WP53110 370 aa1.31□□□□□ -2.2
SEC22YLR268W YMR279CQ03263 540 aa1.31□□□□□ -2.2
SEC22YLR268W BEM2P39960 2167 aaKnown RBP1.31□□□□□ -2.2
SEC22YLR268W IPP1P00817 287 aaKnown RBP1.3□□□□□ -2.2
SEC22YLR268W Q0255P03881 472 aa1.3□□□□□ -2.2
SEC22YLR268W PUT1P09368 476 aa1.3□□□□□ -2.2
SEC22YLR268W YHR032W-AP0C5N6 59 aa1.3□□□□□ -2.2
SEC22YLR268W YCR102CP25608 368 aa1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms