RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C RPL10P41805 221 aaKnown RBP1.3□□□□□ -2.2
AFB1YLR040C BBP1Q12365 385 aa1.3□□□□□ -2.2
AFB1YLR040C BOL1Q3E793 110 aa1.3□□□□□ -2.2
AFB1YLR040C SWI1P09547 1314 aa1.3□□□□□ -2.2
AFB1YLR040C COX2P00410 251 aa1.29□□□□□ -2.2
AFB1YLR040C Q0255P03881 472 aa1.29□□□□□ -2.2
AFB1YLR040C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
AFB1YLR040C CTR2P38865 189 aa1.29□□□□□ -2.2
AFB1YLR040C SNZ3P43545 298 aa1.29□□□□□ -2.2
AFB1YLR040C SSK22P25390 1331 aaPredicted RBP1.29□□□□□ -2.2
AFB1YLR040C POL30P15873 258 aaKnown RBP1.28□□□□□ -2.2
AFB1YLR040C VPS3P23643 1011 aa1.28□□□□□ -2.2
AFB1YLR040C JEN1P36035 616 aa1.28□□□□□ -2.2
AFB1YLR040C MSA2P36157 363 aa1.28□□□□□ -2.2
AFB1YLR040C COS8P38723 381 aa1.28□□□□□ -2.2
AFB1YLR040C SMB1P40018 196 aaKnown RBP1.28□□□□□ -2.2
AFB1YLR040C YER189WP40104 122 aa1.28□□□□□ -2.2
AFB1YLR040C ALG11P53954 548 aaKnown RBP1.28□□□□□ -2.2
AFB1YLR040C COQ10Q08058 207 aa1.28□□□□□ -2.2
AFB1YLR040C SNF8Q12483 233 aa1.28□□□□□ -2.2
AFB1YLR040C SSH1P38353 490 aaKnown RBP1.27□□□□□ -2.21
AFB1YLR040C PRS2P38620 318 aaKnown RBP1.27□□□□□ -2.21
AFB1YLR040C YHR125WP38831 101 aa1.27□□□□□ -2.21
AFB1YLR040C ARC15P40518 154 aaRIP-Chip data1.27□□□□□ -2.21not detected
AFB1YLR040C ASI3P53983 676 aa1.27□□□□□ -2.21
AFB1YLR040C CTF19Q02732 369 aa1.27□□□□□ -2.21
AFB1YLR040C COX20Q04935 205 aa1.27□□□□□ -2.21
AFB1YLR040C YLR462WO13556 202 aa1.26□□□□□ -2.21
AFB1YLR040C CDC7P06243 507 aa1.26□□□□□ -2.21
AFB1YLR040C SCL1P21243 252 aaKnown RBP1.26□□□□□ -2.21
AFB1YLR040C YBR096WP38256 230 aa1.26□□□□□ -2.21
AFB1YLR040C YHB1P39676 399 aaKnown RBP1.26□□□□□ -2.21
AFB1YLR040C YEL075CP39972 122 aa1.26□□□□□ -2.21
AFB1YLR040C YAR1P46683 200 aa1.26□□□□□ -2.21
AFB1YLR040C MRH4P53166 561 aa1.26□□□□□ -2.21
AFB1YLR040C DAD3P69850 94 aa1.26□□□□□ -2.21
AFB1YLR040C PRM15Q03262 622 aa1.26□□□□□ -2.21
AFB1YLR040C MRPS8Q03799 155 aa1.26□□□□□ -2.21
AFB1YLR040C YPR147CQ06522 304 aaKnown RBP1.26□□□□□ -2.21
AFB1YLR040C ATO3Q12359 275 aa1.26□□□□□ -2.21
AFB1YLR040C COX5AP00424 153 aa1.25□□□□□ -2.21
AFB1YLR040C OM45P16547 393 aa1.25□□□□□ -2.21
AFB1YLR040C MRPL37P36532 105 aa1.25□□□□□ -2.21
AFB1YLR040C DOG1P38774 246 aa1.25□□□□□ -2.21
AFB1YLR040C THO1P40040 218 aaKnown RBP1.25□□□□□ -2.21
AFB1YLR040C GLG2P47011 380 aa1.25□□□□□ -2.21
AFB1YLR040C EMC2P47133 292 aaKnown RBP1.25□□□□□ -2.21
AFB1YLR040C YDR124WQ04608 324 aa1.25□□□□□ -2.21
AFB1YLR040C ATG17Q06410 417 aa1.25□□□□□ -2.21
AFB1YLR040C RPL24AP04449 155 aaKnown RBP1.24□□□□□ -2.21
AFB1YLR040C YKR104WP0CE69 306 aa1.24□□□□□ -2.21
AFB1YLR040C YGL159WP53110 370 aa1.24□□□□□ -2.21
AFB1YLR040C SNZ2P53824 298 aa1.24□□□□□ -2.21
AFB1YLR040C GOT1Q03554 138 aa1.24□□□□□ -2.21
AFB1YLR040C YLR030WQ07967 263 aa1.24□□□□□ -2.21
AFB1YLR040C SYC1Q08553 188 aaPredicted RBP1.24□□□□□ -2.21
AFB1YLR040C YOR186WQ08560 144 aa1.24□□□□□ -2.21
AFB1YLR040C AKR2Q12013 749 aa1.24□□□□□ -2.21
AFB1YLR040C MRP1P10662 321 aaKnown RBP1.23□□□□□ -2.21
AFB1YLR040C FBA1P14540 359 aaKnown RBP1.23□□□□□ -2.21
AFB1YLR040C DAL82P21705 255 aa1.23□□□□□ -2.21
AFB1YLR040C PEX4P29340 183 aa1.23□□□□□ -2.21
AFB1YLR040C HOM6P31116 359 aaKnown RBP1.23□□□□□ -2.21
AFB1YLR040C ERG24P32462 438 aaKnown RBP1.23□□□□□ -2.21
AFB1YLR040C EBP2P36049 427 aaKnown RBP1.23□□□□□ -2.21
AFB1YLR040C MEP1P40260 492 aa1.23□□□□□ -2.21
AFB1YLR040C PEP8P40335 379 aa1.23□□□□□ -2.21
AFB1YLR040C YGR026WP53217 278 aa1.23□□□□□ -2.21
AFB1YLR040C YMR279CQ03263 540 aa1.23□□□□□ -2.21
AFB1YLR040C FAR8Q05040 523 aa1.23□□□□□ -2.21
AFB1YLR040C VMA11P32842 164 aa1.22□□□□□ -2.21
AFB1YLR040C MRX3P38172 270 aa1.22□□□□□ -2.21
AFB1YLR040C GOS1P38736 223 aa1.22□□□□□ -2.21
AFB1YLR040C PET100P38958 111 aa1.22□□□□□ -2.21
AFB1YLR040C CYT2Q00873 224 aa1.22□□□□□ -2.21
AFB1YLR040C SPG4Q04438 115 aa1.22□□□□□ -2.21
AFB1YLR040C ADH6Q04894 360 aaKnown RBP1.22□□□□□ -2.21
AFB1YLR040C DSF1P0CX08 502 aa1.21□□□□□ -2.22
AFB1YLR040C YNR073CP0CX09 502 aa1.21□□□□□ -2.22
AFB1YLR040C PHO88P38264 188 aaPredicted RBP1.21□□□□□ -2.22
AFB1YLR040C YHR022CP38763 256 aa1.21□□□□□ -2.22
AFB1YLR040C CIS3P47001 227 aa1.21□□□□□ -2.22
AFB1YLR040C GTR2P53290 341 aa1.21□□□□□ -2.22
AFB1YLR040C INM2Q05533 292 aa1.21□□□□□ -2.22
AFB1YLR040C YPR098CQ06089 161 aa1.21□□□□□ -2.22
AFB1YLR040C DDI2P0CH63 225 aa1.2□□□□□ -2.22
AFB1YLR040C DDI3P0CH64 225 aa1.2□□□□□ -2.22
AFB1YLR040C MDH3P32419 343 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
AFB1YLR040C SGE1P33335 543 aa1.2□□□□□ -2.22
AFB1YLR040C BIG1P38813 335 aa1.2□□□□□ -2.22
AFB1YLR040C YER135CP40082 130 aa1.2□□□□□ -2.22
AFB1YLR040C BMT5P40493 336 aa1.2□□□□□ -2.22
AFB1YLR040C YGR219WP53307 113 aa1.2□□□□□ -2.22
AFB1YLR040C YNL046WP53956 172 aa1.2□□□□□ -2.22
AFB1YLR040C YDR209CQ03480 137 aa1.2□□□□□ -2.22
AFB1YLR040C YPR172WQ06608 200 aa1.2□□□□□ -2.22
AFB1YLR040C RRP40Q08285 240 aaKnown RBP1.2□□□□□ -2.22
AFB1YLR040C MSF1P08425 469 aa1.19□□□□□ -2.22
AFB1YLR040C RPS5P26783 225 aaKnown RBP1.19□□□□□ -2.22
AFB1YLR040C OAC1P32332 324 aa1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms