RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C MSK1P32048 576 aa2.57□□□□□ -2
SDO1YLR022C APE2P32454 952 aaKnown RBP2.57□□□□□ -2
SDO1YLR022C FRE2P36033 711 aa2.57□□□□□ -2
SDO1YLR022C YCR041WP37265 110 aa2.57□□□□□ -2
SDO1YLR022C YHR122WP38829 231 aa2.57□□□□□ -2
SDO1YLR022C CCT2P39076 527 aaKnown RBP2.57□□□□□ -2
SDO1YLR022C YER079WP40052 210 aaKnown RBP2.57□□□□□ -2
SDO1YLR022C YER084WP40057 128 aa2.57□□□□□ -2
SDO1YLR022C YFR054CP43622 192 aa2.57□□□□□ -2
SDO1YLR022C AVT4P50944 713 aa2.57□□□□□ -2
SDO1YLR022C YNL046WP53956 172 aa2.57□□□□□ -2
SDO1YLR022C HPT1Q04178 221 aaKnown RBP2.57□□□□□ -2
SDO1YLR022C ATG38Q05789 226 aaKnown RBP2.57□□□□□ -2
SDO1YLR022C GMC2Q06201 188 aa2.57□□□□□ -2
SDO1YLR022C YLR173WQ06247 608 aa2.57□□□□□ -2
SDO1YLR022C MHR1Q06630 226 aa2.57□□□□□ -2
SDO1YLR022C MRPL35Q06678 367 aa2.57□□□□□ -2
SDO1YLR022C YOL029CQ08187 201 aa2.57□□□□□ -2
SDO1YLR022C UNG1P12887 359 aa2.56□□□□□ -2
SDO1YLR022C GLC7P32598 312 aaKnown RBP2.56□□□□□ -2
SDO1YLR022C RTC2P38279 296 aa2.56□□□□□ -2
SDO1YLR022C POP4P38336 279 aa2.56□□□□□ -2
SDO1YLR022C RRP4P38792 359 aaKnown RBP2.56□□□□□ -2
SDO1YLR022C AIM2P39721 246 aa2.56□□□□□ -2
SDO1YLR022C YNL208WP40159 199 aaKnown RBP2.56□□□□□ -2
SDO1YLR022C RFC4P40339 323 aaKnown RBP2.56□□□□□ -2
SDO1YLR022C SYG1P40528 902 aa2.56□□□□□ -2
SDO1YLR022C YFL067WP43537 175 aa2.56□□□□□ -2
SDO1YLR022C TRS85P46944 698 aa2.56□□□□□ -2
SDO1YLR022C RIB4P50861 169 aaPredicted RBP2.56□□□□□ -2
SDO1YLR022C EFM5P53200 248 aaKnown RBP2.56□□□□□ -2
SDO1YLR022C YPL077CQ02831 240 aa2.56□□□□□ -2
SDO1YLR022C MET31Q03081 177 aa2.56□□□□□ -2
SDO1YLR022C INP1Q03694 420 aa2.56□□□□□ -2
SDO1YLR022C URH1Q04179 340 aa2.56□□□□□ -2
SDO1YLR022C URC2Q04411 772 aa2.56□□□□□ -2
SDO1YLR022C STE23Q06010 1027 aa2.56□□□□□ -2
SDO1YLR022C YLR177WQ06251 628 aa2.56□□□□□ -2
SDO1YLR022C PRP11Q07350 266 aaPredicted RBP2.56□□□□□ -2
SDO1YLR022C GRE1Q08969 168 aa2.56□□□□□ -2
SDO1YLR022C THP3Q12049 470 aaKnown RBP2.56□□□□□ -2
SDO1YLR022C DAS2Q12084 232 aa2.56□□□□□ -2
SDO1YLR022C RBD2Q12270 262 aa2.56□□□□□ -2
SDO1YLR022C YAL064W-BO13512 126 aa2.55□□□□□ -2
SDO1YLR022C RAD1P06777 1100 aa2.55□□□□□ -2
SDO1YLR022C SPT3P06844 337 aa2.55□□□□□ -2
SDO1YLR022C RPL12AP0CX53 165 aaKnown RBP2.55□□□□□ -2
SDO1YLR022C RPL12BP0CX54 165 aa2.55□□□□□ -2
SDO1YLR022C APA2P22108 325 aa2.55□□□□□ -2
SDO1YLR022C MEK1P24719 497 aaPredicted RBP2.55□□□□□ -2
SDO1YLR022C YPS1P32329 569 aa2.55□□□□□ -2
SDO1YLR022C DPH5P32469 300 aaPredicted RBP2.55□□□□□ -2
SDO1YLR022C COX13P32799 129 aa2.55□□□□□ -2
SDO1YLR022C SSO1P32867 290 aa2.55□□□□□ -2
SDO1YLR022C CLB6P32943 380 aa2.55□□□□□ -2
SDO1YLR022C SWD3P38123 315 aa2.55□□□□□ -2
SDO1YLR022C CHK1P38147 527 aa2.55□□□□□ -2
SDO1YLR022C CDC40P40968 455 aaPredicted RBP2.55□□□□□ -2
SDO1YLR022C DBP6P53734 629 aaKnown RBP2.55□□□□□ -2
SDO1YLR022C COS1P53822 381 aa2.55□□□□□ -2
SDO1YLR022C GIM3P53900 129 aa2.55□□□□□ -2
SDO1YLR022C STD1Q02794 444 aa2.55□□□□□ -2
SDO1YLR022C YMR279CQ03263 540 aa2.55□□□□□ -2
SDO1YLR022C GPN3Q06543 272 aa2.55□□□□□ -2
SDO1YLR022C GAT3Q07928 141 aa2.55□□□□□ -2
SDO1YLR022C YDL109CQ12103 647 aa2.55□□□□□ -2
SDO1YLR022C WTM1Q12363 437 aaKnown RBP2.55□□□□□ -2
SDO1YLR022C TIM9O74700 87 aa2.54□□□□□ -2
SDO1YLR022C RPL18AP0CX49 186 aaKnown RBP2.54□□□□□ -2
SDO1YLR022C RPL18BP0CX50 186 aaKnown RBP2.54□□□□□ -2
SDO1YLR022C GPA2P10823 449 aa2.54□□□□□ -2
SDO1YLR022C KSS1P14681 368 aa2.54□□□□□ -2
SDO1YLR022C SCO1P23833 295 aa2.54□□□□□ -2
SDO1YLR022C CPR4P25334 318 aa2.54□□□□□ -2
SDO1YLR022C CTR86P25355 563 aa2.54□□□□□ -2
SDO1YLR022C VMA5P31412 392 aaKnown RBP2.54□□□□□ -2
SDO1YLR022C SPO23P33757 523 aa2.54□□□□□ -2
SDO1YLR022C GPX1P36014 167 aa2.54□□□□□ -2
SDO1YLR022C YOR062CP36025 268 aa2.54□□□□□ -2
SDO1YLR022C COS9P36034 407 aa2.54□□□□□ -2
SDO1YLR022C NAT2P37293 288 aa2.54□□□□□ -2
SDO1YLR022C RCK1P38622 512 aa2.54□□□□□ -2
SDO1YLR022C FMC1P40491 155 aa2.54□□□□□ -2
SDO1YLR022C LYS12P40495 371 aaKnown RBP2.54□□□□□ -2
SDO1YLR022C INA22P40576 216 aa2.54□□□□□ -2
SDO1YLR022C FMP32P43557 207 aa2.54□□□□□ -2
SDO1YLR022C MRX5P47007 382 aa2.54□□□□□ -2
SDO1YLR022C HMS2P47175 358 aa2.54□□□□□ -2
SDO1YLR022C YPT32P51996 222 aaKnown RBP2.54□□□□□ -2
SDO1YLR022C YLR152CP54072 576 aa2.54□□□□□ -2
SDO1YLR022C ODC1Q03028 310 aa2.54□□□□□ -2
SDO1YLR022C CSN9Q03981 162 aa2.54□□□□□ -2
SDO1YLR022C CTS2Q06350 511 aa2.54□□□□□ -2
SDO1YLR022C LDS2Q08218 356 aa2.54□□□□□ -2
SDO1YLR022C SKI7Q08491 747 aaPredicted RBP2.54□□□□□ -2
SDO1YLR022C BTS1Q12051 335 aa2.54□□□□□ -2
SDO1YLR022C YPR1Q12458 312 aa2.54□□□□□ -2
SDO1YLR022C SOD1P00445 154 aaKnown RBP2.53□□□□□ -2
SDO1YLR022C MER1P16523 270 aa2.53□□□□□ -2
SDO1YLR022C PHO13P19881 312 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms