RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C YBL010CP32788 280 aa8.59□□□□□ -1.03
POM34YLR018C SEN34P39707 275 aa8.59□□□□□ -1.03
POM34YLR018C AVT7P40501 490 aa8.59□□□□□ -1.03
POM34YLR018C OTU1P43558 301 aa8.59□□□□□ -1.03
POM34YLR018C SIP18P50263 79 aa8.59□□□□□ -1.03
POM34YLR018C HAS1Q03532 505 aaKnown RBP8.59□□□□□ -1.03
POM34YLR018C UTP15Q04305 513 aaKnown RBP8.59□□□□□ -1.03
POM34YLR018C ENV7Q12003 364 aa8.59□□□□□ -1.03
POM34YLR018C RNH203Q12338 110 aa8.59□□□□□ -1.03
POM34YLR018C RPL3P14126 387 aaKnown RBP8.58□□□□□ -1.04
POM34YLR018C URA6P15700 204 aa8.58□□□□□ -1.04
POM34YLR018C BUD23P25627 275 aaPredicted RBP8.58□□□□□ -1.04
POM34YLR018C DEG1P31115 442 aaKnown RBP8.58□□□□□ -1.04
POM34YLR018C YBR242WP38331 238 aa8.58□□□□□ -1.04
POM34YLR018C YND1P40009 630 aa8.58□□□□□ -1.04
POM34YLR018C FLX1P40464 311 aa8.58□□□□□ -1.04
POM34YLR018C QDR1P40475 563 aa8.58□□□□□ -1.04
POM34YLR018C MTL1P53214 551 aa8.58□□□□□ -1.04
POM34YLR018C TY1A-MR1Q04215 440 aa8.58□□□□□ -1.04
POM34YLR018C NCE102Q12207 173 aaRIP-Chip data8.58□□□□□ -1.04not detected
POM34YLR018C USB1Q12208 290 aaKnown RBP8.58□□□□□ -1.04
POM34YLR018C CHO1P08456 276 aa8.57□□□□□ -1.04
POM34YLR018C MSI1P13712 422 aa8.57□□□□□ -1.04
POM34YLR018C CDC34P14682 295 aa8.57□□□□□ -1.04
POM34YLR018C RNA14P25298 677 aaKnown RBP8.57□□□□□ -1.04
POM34YLR018C ATG22P25568 528 aa8.57□□□□□ -1.04
POM34YLR018C VMA5P31412 392 aaKnown RBP8.57□□□□□ -1.04
POM34YLR018C MCH2P36032 473 aa8.57□□□□□ -1.04
POM34YLR018C SOL3P38858 249 aa8.57□□□□□ -1.04
POM34YLR018C PIG2P40187 538 aa8.57□□□□□ -1.04
POM34YLR018C DIE2P50076 525 aa8.57□□□□□ -1.04
POM34YLR018C MRPL13Q02204 264 aa8.57□□□□□ -1.04
POM34YLR018C HNT1Q04344 158 aaKnown RBP8.57□□□□□ -1.04
POM34YLR018C SCM3Q12334 223 aa8.57□□□□□ -1.04
POM34YLR018C ERP4Q12450 207 aa8.57□□□□□ -1.04
POM34YLR018C TDH2P00358 332 aaKnown RBP8.56□□□□□ -1.04
POM34YLR018C RAD52P06778 471 aaKnown RBP8.56□□□□□ -1.04
POM34YLR018C GCN3P14741 305 aa8.56□□□□□ -1.04
POM34YLR018C ACH1P32316 526 aa8.56□□□□□ -1.04
POM34YLR018C VAM7P32912 316 aa8.56□□□□□ -1.04
POM34YLR018C CLB6P32943 380 aa8.56□□□□□ -1.04
POM34YLR018C OST1P41543 476 aaKnown RBP8.56□□□□□ -1.04
POM34YLR018C YFL051CP43552 160 aa8.56□□□□□ -1.04
POM34YLR018C NSA1P53136 463 aaPredicted RBP8.56□□□□□ -1.04
POM34YLR018C ACS1Q01574 713 aa8.56□□□□□ -1.04
POM34YLR018C RDI1Q12434 202 aa8.56□□□□□ -1.04
POM34YLR018C CDC23P16522 626 aa8.55□□□□□ -1.04
POM34YLR018C RPI1P23250 407 aaKnown RBP8.55□□□□□ -1.04
POM34YLR018C YKL063CP35725 167 aa8.55□□□□□ -1.04
POM34YLR018C ARO9P38840 513 aaPredicted RBP8.55□□□□□ -1.04
POM34YLR018C BOL3P39724 118 aa8.55□□□□□ -1.04
POM34YLR018C TOK1P40310 691 aa8.55□□□□□ -1.04
POM34YLR018C TY1A-DR2Q03964 440 aaKnown RBP8.55□□□□□ -1.04
POM34YLR018C YDR391CQ04170 232 aa8.55□□□□□ -1.04
POM34YLR018C SPR28Q04921 423 aa8.55□□□□□ -1.04
POM34YLR018C MRX9Q07349 420 aaKnown RBP8.55□□□□□ -1.04
POM34YLR018C RSC58Q07979 502 aa8.55□□□□□ -1.04
POM34YLR018C RRS1Q08746 203 aaKnown RBP8.55□□□□□ -1.04
POM34YLR018C CDC28P00546 298 aaKnown RBP8.54□□□□□ -1.04
POM34YLR018C MSS1P32559 526 aaPredicted RBP8.54□□□□□ -1.04
POM34YLR018C GLC7P32598 312 aaKnown RBP8.54□□□□□ -1.04
POM34YLR018C REC114P32841 428 aa8.54□□□□□ -1.04
POM34YLR018C MRPL3P36516 390 aa8.54□□□□□ -1.04
POM34YLR018C ARC40P38328 384 aaKnown RBP8.54□□□□□ -1.04
POM34YLR018C YHL037CP38733 133 aa8.54□□□□□ -1.04
POM34YLR018C UBC13P52490 153 aa8.54□□□□□ -1.04
POM34YLR018C UFD1P53044 361 aa8.54□□□□□ -1.04
POM34YLR018C YIP5P53108 310 aa8.54□□□□□ -1.04
POM34YLR018C RSM27P53305 110 aa8.54□□□□□ -1.04
POM34YLR018C GIM3P53900 129 aa8.54□□□□□ -1.04
POM34YLR018C ARG5,6Q01217 863 aa8.54□□□□□ -1.04
POM34YLR018C YPR196WQ06595 470 aa8.54□□□□□ -1.04
POM34YLR018C RFU1Q08003 200 aa8.54□□□□□ -1.04
POM34YLR018C YLR125WQ12138 136 aa8.54□□□□□ -1.04
POM34YLR018C REP2P03872 296 aa8.53□□□□□ -1.04
POM34YLR018C RFA3P26755 122 aaKnown RBP8.53□□□□□ -1.04
POM34YLR018C YIL029CP40538 142 aa8.53□□□□□ -1.04
POM34YLR018C GNA1P43577 159 aaPredicted RBP8.53□□□□□ -1.04
POM34YLR018C API2Q04413 109 aa8.53□□□□□ -1.04
POM34YLR018C HUT1Q12520 339 aa8.53□□□□□ -1.04
POM34YLR018C FSH3Q99369 266 aa8.53□□□□□ -1.04
POM34YLR018C PRP8P33334 2413 aaKnown RBP8.53□□□□□ -1.04
POM34YLR018C NHP6BP11633 99 aaKnown RBP8.52□□□□□ -1.05
POM34YLR018C HNM1P19807 563 aa8.52□□□□□ -1.05
POM34YLR018C SAR1P20606 190 aaKnown RBP8.52□□□□□ -1.05
POM34YLR018C SAG1P20840 650 aa8.52□□□□□ -1.05
POM34YLR018C SRL3P36167 246 aa8.52□□□□□ -1.05
POM34YLR018C YBR220CP38318 560 aa8.52□□□□□ -1.05
POM34YLR018C YER079WP40052 210 aaKnown RBP8.52□□□□□ -1.05
POM34YLR018C MRPS16Q02608 121 aa8.52□□□□□ -1.05
POM34YLR018C EAF3Q12432 401 aa8.52□□□□□ -1.05
POM34YLR018C RPL25P04456 142 aaKnown RBP8.51□□□□□ -1.05
POM34YLR018C MET3P08536 511 aa8.51□□□□□ -1.05
POM34YLR018C GRX2P17695 143 aaKnown RBP8.51□□□□□ -1.05
POM34YLR018C RFA1P22336 621 aaKnown RBP8.51□□□□□ -1.05
POM34YLR018C PPQ1P32945 549 aa8.51□□□□□ -1.05
POM34YLR018C MRPL27P36526 146 aaPredicted RBP8.51□□□□□ -1.05
POM34YLR018C MRPL36P36531 177 aa8.51□□□□□ -1.05
POM34YLR018C FIG1P38224 298 aa8.51□□□□□ -1.05
POM34YLR018C SSN8P47821 323 aa8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms