RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C IMO32P53219 342 aa8.69□□□□□ -1.02
SHB17YKR043C RCF1Q03713 159 aa8.69□□□□□ -1.02
SHB17YKR043C RRP17Q04031 235 aaPredicted RBP8.69□□□□□ -1.02
SHB17YKR043C GMC1Q04399 608 aa8.69□□□□□ -1.02
SHB17YKR043C MDM36Q06820 579 aa8.69□□□□□ -1.02
SHB17YKR043C TIR4Q12218 487 aaPredicted RBP8.69□□□□□ -1.02
SHB17YKR043C GEP5Q12393 293 aa8.69□□□□□ -1.02
SHB17YKR043C RPL39P04650 51 aa8.68□□□□□ -1.02
SHB17YKR043C NCA3P46955 337 aa8.68□□□□□ -1.02
SHB17YKR043C AVT4P50944 713 aa8.68□□□□□ -1.02
SHB17YKR043C DOC1P53068 250 aa8.68□□□□□ -1.02
SHB17YKR043C RNH201P53942 307 aa8.68□□□□□ -1.02
SHB17YKR043C MCM21Q06675 368 aa8.68□□□□□ -1.02
SHB17YKR043C SNC2P33328 115 aa8.67□□□□□ -1.02
SHB17YKR043C FMP23P38231 175 aa8.67□□□□□ -1.02
SHB17YKR043C YHL044WP38727 235 aa8.67□□□□□ -1.02
SHB17YKR043C SIT1P39980 628 aa8.67□□□□□ -1.02
SHB17YKR043C YND1P40009 630 aa8.67□□□□□ -1.02
SHB17YKR043C BUD8P41698 603 aa8.67□□□□□ -1.02
SHB17YKR043C YLR108CQ12259 485 aa8.67□□□□□ -1.02
SHB17YKR043C RTR2Q12378 196 aa8.67□□□□□ -1.02
SHB17YKR043C GCN4P03069 281 aa8.66□□□□□ -1.02
SHB17YKR043C REP1P03871 373 aa8.66□□□□□ -1.02
SHB17YKR043C HXT2P23585 541 aa8.66□□□□□ -1.02
SHB17YKR043C SHE2P36068 246 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
SHB17YKR043C CCZ1P38273 704 aa8.66□□□□□ -1.02
SHB17YKR043C YIR020CP40575 100 aa8.66□□□□□ -1.02
SHB17YKR043C SCW4P53334 386 aaKnown RBP8.66□□□□□ -1.02
SHB17YKR043C SPR28Q04921 423 aa8.66□□□□□ -1.02
SHB17YKR043C YBL113CQ7M4S9 792 aa8.66□□□□□ -1.02
SHB17YKR043C YLR358CO13565 187 aa8.65□□□□□ -1.02
SHB17YKR043C BUD23P25627 275 aaPredicted RBP8.65□□□□□ -1.02
SHB17YKR043C YOX1P34161 385 aa8.65□□□□□ -1.02
SHB17YKR043C GPX2P38143 162 aa8.65□□□□□ -1.02
SHB17YKR043C YER079WP40052 210 aaKnown RBP8.65□□□□□ -1.02
SHB17YKR043C BNA2P47125 453 aa8.65□□□□□ -1.02
SHB17YKR043C NSA1P53136 463 aaPredicted RBP8.65□□□□□ -1.02
SHB17YKR043C YDR248CQ03786 193 aa8.65□□□□□ -1.02
SHB17YKR043C MGR3Q04472 501 aa8.65□□□□□ -1.02
SHB17YKR043C HIS3P06633 220 aa8.64□□□□□ -1.03
SHB17YKR043C SOL3P38858 249 aa8.64□□□□□ -1.03
SHB17YKR043C CTR2P38865 189 aa8.64□□□□□ -1.03
SHB17YKR043C TPO3Q06451 622 aa8.64□□□□□ -1.03
SHB17YKR043C GPN3Q06543 272 aa8.64□□□□□ -1.03
SHB17YKR043C MRX9Q07349 420 aaKnown RBP8.64□□□□□ -1.03
SHB17YKR043C FRE8Q12209 686 aa8.64□□□□□ -1.03
SHB17YKR043C RDL1Q12305 139 aaKnown RBP8.64□□□□□ -1.03
SHB17YKR043C FUR4P05316 633 aaKnown RBP8.63□□□□□ -1.03
SHB17YKR043C RPS18AP0CX55 146 aaKnown RBP8.63□□□□□ -1.03
SHB17YKR043C RPS18BP0CX56 146 aaPredicted RBP8.63□□□□□ -1.03
SHB17YKR043C CNE1P27825 502 aa8.63□□□□□ -1.03
SHB17YKR043C TMA19P35691 167 aaKnown RBP8.63□□□□□ -1.03
SHB17YKR043C YBR137WP38276 179 aa8.63□□□□□ -1.03
SHB17YKR043C YDR114CQ04597 100 aa8.63□□□□□ -1.03
SHB17YKR043C YLR283WQ05867 314 aa8.63□□□□□ -1.03
SHB17YKR043C PIN3Q06449 215 aa8.63□□□□□ -1.03
SHB17YKR043C HUT1Q12520 339 aa8.63□□□□□ -1.03
SHB17YKR043C YCL048W-AQ2V2Q2 79 aa8.63□□□□□ -1.03
SHB17YKR043C BPH1P25356 2167 aa8.62□□□□□ -1.03
SHB17YKR043C CDC28P00546 298 aaKnown RBP8.62□□□□□ -1.03
SHB17YKR043C GCN3P14741 305 aa8.62□□□□□ -1.03
SHB17YKR043C RMD6P39975 231 aa8.62□□□□□ -1.03
SHB17YKR043C JLP2P40206 208 aa8.62□□□□□ -1.03
SHB17YKR043C SGN1P40561 250 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
SHB17YKR043C TAF4P50105 388 aa8.62□□□□□ -1.03
SHB17YKR043C ORM1P53224 222 aa8.62□□□□□ -1.03
SHB17YKR043C MRPL35Q06678 367 aa8.62□□□□□ -1.03
SHB17YKR043C ATG41Q12048 136 aa8.62□□□□□ -1.03
SHB17YKR043C PET18P25362 215 aa8.61□□□□□ -1.03
SHB17YKR043C MTC7P32633 139 aa8.61□□□□□ -1.03
SHB17YKR043C MRPL36P36531 177 aa8.61□□□□□ -1.03
SHB17YKR043C UMP1P38293 148 aa8.61□□□□□ -1.03
SHB17YKR043C RTT105P40063 208 aa8.61□□□□□ -1.03
SHB17YKR043C ATG18P43601 500 aa8.61□□□□□ -1.03
SHB17YKR043C BNA6P43619 295 aa8.61□□□□□ -1.03
SHB17YKR043C GON7P46984 123 aa8.61□□□□□ -1.03
SHB17YKR043C SSN8P47821 323 aa8.61□□□□□ -1.03
SHB17YKR043C CPR8P53728 308 aa8.61□□□□□ -1.03
SHB17YKR043C BUD25P85052 153 aa8.61□□□□□ -1.03
SHB17YKR043C TDA1Q03533 586 aa8.61□□□□□ -1.03
SHB17YKR043C FCY22Q12119 530 aa8.61□□□□□ -1.03
SHB17YKR043C TDH2P00358 332 aaKnown RBP8.6□□□□□ -1.03
SHB17YKR043C SPS4P09937 338 aa8.6□□□□□ -1.03
SHB17YKR043C APA2P22108 325 aa8.6□□□□□ -1.03
SHB17YKR043C ARO4P32449 370 aaKnown RBP8.6□□□□□ -1.03
SHB17YKR043C NAT2P37293 288 aa8.6□□□□□ -1.03
SHB17YKR043C SLM1P40485 686 aa8.6□□□□□ -1.03
SHB17YKR043C GEP7P53171 287 aa8.6□□□□□ -1.03
SHB17YKR043C SMM1P53720 384 aaKnown RBP8.6□□□□□ -1.03
SHB17YKR043C YMR254CQ04838 102 aa8.6□□□□□ -1.03
SHB17YKR043C CSI2Q08054 341 aa8.6□□□□□ -1.03
SHB17YKR043C REP2P03872 296 aa8.59□□□□□ -1.03
SHB17YKR043C GCD1P09032 578 aaPredicted RBP8.59□□□□□ -1.03
SHB17YKR043C SMB1P40018 196 aaKnown RBP8.59□□□□□ -1.03
SHB17YKR043C CTF19Q02732 369 aa8.59□□□□□ -1.03
SHB17YKR043C YPL067CQ02754 198 aa8.59□□□□□ -1.03
SHB17YKR043C GRC3Q07845 632 aa8.59□□□□□ -1.03
SHB17YKR043C SOG2Q08817 791 aa8.59□□□□□ -1.03
SHB17YKR043C MPD1Q12404 318 aaKnown RBP8.59□□□□□ -1.03
SHB17YKR043C EAF3Q12432 401 aa8.59□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 63.3 ms