RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C CDH1P53197 566 aa6.33□□□□□ -1.4
HEL1YKR017C RHO4Q00246 291 aa6.33□□□□□ -1.4
HEL1YKR017C YML018CQ03730 393 aa6.33□□□□□ -1.4
HEL1YKR017C DET1Q99288 334 aaKnown RBP6.33□□□□□ -1.4
HEL1YKR017C TY1A-ORP0CX59 440 aa6.32□□□□□ -1.4
HEL1YKR017C TY1A-PR2P0CX60 440 aa6.32□□□□□ -1.4
HEL1YKR017C GLN3P18494 730 aa6.32□□□□□ -1.4
HEL1YKR017C KTI12P34253 313 aaKnown RBP6.32□□□□□ -1.4
HEL1YKR017C YBR053CP38235 358 aa6.32□□□□□ -1.4
HEL1YKR017C YGR149WP48236 432 aa6.32□□□□□ -1.4
HEL1YKR017C SUT1P53032 299 aaKnown RBP6.32□□□□□ -1.4
HEL1YKR017C ERG13P54839 491 aaKnown RBP6.32□□□□□ -1.4
HEL1YKR017C MAK3Q03503 176 aa6.32□□□□□ -1.4
HEL1YKR017C RAV2Q03956 351 aa6.32□□□□□ -1.4
HEL1YKR017C UPS3Q04006 179 aa6.32□□□□□ -1.4
HEL1YKR017C PFA4Q12006 378 aa6.32□□□□□ -1.4
HEL1YKR017C NUS1Q12063 375 aa6.32□□□□□ -1.4
HEL1YKR017C YOR342CQ12182 319 aa6.32□□□□□ -1.4
HEL1YKR017C RAX2Q12465 1220 aa6.32□□□□□ -1.4
HEL1YKR017C YIL177CP40434 1758 aa6.32□□□□□ -1.4
HEL1YKR017C YJL225CP40889 1758 aa6.32□□□□□ -1.4
HEL1YKR017C TY3B-GQ99315 1547 aa6.31□□□□□ -1.4
HEL1YKR017C FLP1P03870 423 aa6.31□□□□□ -1.4
HEL1YKR017C SGA1P08019 549 aa6.31□□□□□ -1.4
HEL1YKR017C GAC1P28006 793 aa6.31□□□□□ -1.4
HEL1YKR017C MSS51P32335 436 aa6.31□□□□□ -1.4
HEL1YKR017C SNC2P33328 115 aa6.31□□□□□ -1.4
HEL1YKR017C YKR075CP36155 307 aa6.31□□□□□ -1.4
HEL1YKR017C RPN11P43588 306 aaKnown RBP6.31□□□□□ -1.4
HEL1YKR017C SCS3P53012 380 aa6.31□□□□□ -1.4
HEL1YKR017C CRZ1P53968 678 aa6.31□□□□□ -1.4
HEL1YKR017C YVH1Q02256 364 aaKnown RBP6.31□□□□□ -1.4
HEL1YKR017C HPT1Q04178 221 aaKnown RBP6.31□□□□□ -1.4
HEL1YKR017C PRR2Q12310 699 aa6.31□□□□□ -1.4
HEL1YKR017C COX3P00420 269 aa6.3□□□□□ -1.4
HEL1YKR017C YER039C-AP0CD97 72 aa6.3□□□□□ -1.4
HEL1YKR017C ERD1P16151 362 aa6.3□□□□□ -1.4
HEL1YKR017C SDH2P21801 266 aa6.3□□□□□ -1.4
HEL1YKR017C TKL1P23254 680 aaKnown RBP6.3□□□□□ -1.4
HEL1YKR017C MGT1P26188 188 aa6.3□□□□□ -1.4
HEL1YKR017C FMT1P32785 401 aa6.3□□□□□ -1.4
HEL1YKR017C PDC2P32896 925 aa6.3□□□□□ -1.4
HEL1YKR017C SFC1P33303 322 aa6.3□□□□□ -1.4
HEL1YKR017C EHT1P38295 451 aa6.3□□□□□ -1.4
HEL1YKR017C SLM6P38343 150 aa6.3□□□□□ -1.4
HEL1YKR017C RPS20P38701 121 aaKnown RBP6.3□□□□□ -1.4
HEL1YKR017C FMP52P40008 231 aa6.3□□□□□ -1.4
HEL1YKR017C YER158CP40095 573 aa6.3□□□□□ -1.4
HEL1YKR017C SGN1P40561 250 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
HEL1YKR017C XPT1P47165 209 aa6.3□□□□□ -1.4
HEL1YKR017C BUL1P48524 976 aa6.3□□□□□ -1.4
HEL1YKR017C YDL186WP48568 277 aa6.3□□□□□ -1.4
HEL1YKR017C ALG13P53178 202 aa6.3□□□□□ -1.4
HEL1YKR017C MSO1P53604 210 aaKnown RBP6.3□□□□□ -1.4
HEL1YKR017C SUR7P54003 302 aa6.3□□□□□ -1.4
HEL1YKR017C HHT1P61830 136 aa6.3□□□□□ -1.4
HEL1YKR017C MRX8Q05473 314 aa6.3□□□□□ -1.4
HEL1YKR017C GRX8Q05926 109 aa6.3□□□□□ -1.4
HEL1YKR017C LDS2Q08218 356 aa6.3□□□□□ -1.4
HEL1YKR017C YPR071WQ12346 211 aa6.3□□□□□ -1.4
HEL1YKR017C CDC25P04821 1589 aa6.3□□□□□ -1.4
HEL1YKR017C BPT1P14772 1559 aa6.3□□□□□ -1.4
HEL1YKR017C STE7P06784 515 aa6.3□□□□□ -1.4
HEL1YKR017C GDH1P07262 454 aaKnown RBP6.3□□□□□ -1.4
HEL1YKR017C YML003WP0CF16 290 aa6.3□□□□□ -1.4
HEL1YKR017C CAP2P13517 287 aa6.3□□□□□ -1.4
HEL1YKR017C SNC1P31109 117 aa6.3□□□□□ -1.4
HEL1YKR017C LSM2P38203 95 aaKnown RBP6.3□□□□□ -1.4
HEL1YKR017C YIP4P53093 235 aa6.3□□□□□ -1.4
HEL1YKR017C MMS2P53152 137 aa6.3□□□□□ -1.4
HEL1YKR017C YGR283CP53336 341 aaPredicted RBP6.3□□□□□ -1.4
HEL1YKR017C TY1A-DR2Q03964 440 aaKnown RBP6.3□□□□□ -1.4
HEL1YKR017C LIP2Q06005 328 aa6.3□□□□□ -1.4
HEL1YKR017C COA6Q3E846 104 aa6.3□□□□□ -1.4
HEL1YKR017C YKR104WP0CE69 306 aa6.29□□□□□ -1.4
HEL1YKR017C PRP45P28004 379 aaPredicted RBP6.29□□□□□ -1.4
HEL1YKR017C DBP8P38719 431 aa6.29□□□□□ -1.4
HEL1YKR017C TIF34P40217 347 aaKnown RBP6.29□□□□□ -1.4
HEL1YKR017C IST3P40565 148 aaPredicted RBP6.29□□□□□ -1.4
HEL1YKR017C YFL040WP43562 540 aa6.29□□□□□ -1.4
HEL1YKR017C SSY5P47002 699 aa6.29□□□□□ -1.4
HEL1YKR017C MTM1P53320 366 aa6.29□□□□□ -1.4
HEL1YKR017C NAM8Q00539 523 aaKnown RBP6.29□□□□□ -1.4
HEL1YKR017C CUE4Q04201 117 aaPredicted RBP6.29□□□□□ -1.4
HEL1YKR017C AIM39Q08223 395 aa6.29□□□□□ -1.4
HEL1YKR017C YPR202WQ08993 238 aa6.29□□□□□ -1.4
HEL1YKR017C ISU2Q12056 156 aa6.29□□□□□ -1.4
HEL1YKR017C SEC7P11075 2009 aaKnown RBP6.28□□□□□ -1.4
HEL1YKR017C STE4P18851 423 aa6.28□□□□□ -1.4
HEL1YKR017C EMP24P32803 203 aaKnown RBP6.28□□□□□ -1.4
HEL1YKR017C YKR041WP36134 250 aa6.28□□□□□ -1.4
HEL1YKR017C ASC1P38011 319 aaKnown RBP6.28□□□□□ -1.4
HEL1YKR017C TSL1P38427 1098 aaKnown RBP6.28□□□□□ -1.4
HEL1YKR017C FSH1P38777 243 aaKnown RBP6.28□□□□□ -1.4
HEL1YKR017C PNT1P38969 423 aa6.28□□□□□ -1.4
HEL1YKR017C YER188WP40103 239 aa6.28□□□□□ -1.4
HEL1YKR017C HNT1Q04344 158 aaKnown RBP6.28□□□□□ -1.4
HEL1YKR017C YMR320WQ04897 101 aa6.28□□□□□ -1.4
HEL1YKR017C TEN1Q07921 160 aa6.28□□□□□ -1.4
HEL1YKR017C ATG5Q12380 294 aa6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms