RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W AIM23P47015 356 aa1.98□□□□□ -2.09
NUP100YKL068W BRR6P53062 197 aa1.98□□□□□ -2.09
NUP100YKL068W SWF1Q04629 336 aa1.98□□□□□ -2.09
NUP100YKL068W YPR127WQ06494 345 aa1.98□□□□□ -2.09
NUP100YKL068W YLR012CQ07927 99 aa1.98□□□□□ -2.09
NUP100YKL068W EMP46Q12396 444 aa1.98□□□□□ -2.09
NUP100YKL068W ARP6Q12509 438 aa1.98□□□□□ -2.09
NUP100YKL068W BEM2P39960 2167 aaKnown RBP1.98□□□□□ -2.09
NUP100YKL068W COX5AP00424 153 aa1.98□□□□□ -2.09
NUP100YKL068W YMC1P32331 307 aa1.98□□□□□ -2.09
NUP100YKL068W YKR041WP36134 250 aa1.98□□□□□ -2.09
NUP100YKL068W YBP1P38315 674 aa1.98□□□□□ -2.09
NUP100YKL068W KRE29P40026 464 aa1.98□□□□□ -2.09
NUP100YKL068W SNX4P47057 423 aa1.98□□□□□ -2.09
NUP100YKL068W VMA10P48836 114 aaKnown RBP1.98□□□□□ -2.09
NUP100YKL068W NSA1P53136 463 aaPredicted RBP1.98□□□□□ -2.09
NUP100YKL068W YNL234WP53857 426 aa1.98□□□□□ -2.09
NUP100YKL068W RNY1Q02933 434 aaKnown RBP1.98□□□□□ -2.09
NUP100YKL068W DPP1Q05521 289 aa1.98□□□□□ -2.09
NUP100YKL068W MFG1Q07684 458 aa1.98□□□□□ -2.09
NUP100YKL068W YLR036CQ07986 203 aa1.98□□□□□ -2.09
NUP100YKL068W RDL2Q08742 149 aaKnown RBP1.98□□□□□ -2.09
NUP100YKL068W TIM18Q08749 192 aa1.98□□□□□ -2.09
NUP100YKL068W MMT2Q08970 484 aa1.98□□□□□ -2.09
NUP100YKL068W YLR053CQ12026 108 aa1.98□□□□□ -2.09
NUP100YKL068W TAF10Q12030 206 aa1.98□□□□□ -2.09
NUP100YKL068W BSC1Q12140 328 aa1.98□□□□□ -2.09
NUP100YKL068W TPI1P00942 248 aaKnown RBP1.97□□□□□ -2.09
NUP100YKL068W ATG15P25641 520 aa1.97□□□□□ -2.09
NUP100YKL068W WSC4P38739 605 aa1.97□□□□□ -2.09
NUP100YKL068W PET8P38921 284 aa1.97□□□□□ -2.09
NUP100YKL068W BDH1P39714 382 aa1.97□□□□□ -2.09
NUP100YKL068W EDC3P39998 551 aaKnown RBP1.97□□□□□ -2.09
NUP100YKL068W SER33P40510 469 aa1.97□□□□□ -2.09
NUP100YKL068W CIN5P40917 295 aa1.97□□□□□ -2.09
NUP100YKL068W POP6P53218 158 aa1.97□□□□□ -2.09
NUP100YKL068W SHY1P53266 389 aa1.97□□□□□ -2.09
NUP100YKL068W RCF2P53721 224 aa1.97□□□□□ -2.09
NUP100YKL068W ARK1P53974 638 aa1.97□□□□□ -2.09
NUP100YKL068W IRC15Q02733 499 aa1.97□□□□□ -2.09
NUP100YKL068W AIM39Q08223 395 aa1.97□□□□□ -2.09
NUP100YKL068W RPN8Q08723 338 aaKnown RBP1.97□□□□□ -2.09
NUP100YKL068W YOR283WQ12040 230 aaKnown RBP1.97□□□□□ -2.09
NUP100YKL068W YLR112WQ12130 139 aa1.97□□□□□ -2.09
NUP100YKL068W HFA1P32874 2273 aa1.97□□□□□ -2.09
NUP100YKL068W MYO1P08964 1928 aa1.97□□□□□ -2.09
NUP100YKL068W TRX3P25372 127 aa1.97□□□□□ -2.09
NUP100YKL068W TAH1P25638 111 aaPredicted RBP1.97□□□□□ -2.09
NUP100YKL068W AGA1P32323 725 aa1.97□□□□□ -2.09
NUP100YKL068W MRPL3P36516 390 aa1.97□□□□□ -2.09
NUP100YKL068W YBR062CP38239 180 aa1.97□□□□□ -2.09
NUP100YKL068W YIL029CP40538 142 aa1.97□□□□□ -2.09
NUP100YKL068W MDV1P47025 714 aa1.97□□□□□ -2.09
NUP100YKL068W IRC18P47056 224 aa1.97□□□□□ -2.09
NUP100YKL068W OST3P48439 350 aa1.97□□□□□ -2.09
NUP100YKL068W AVT4P50944 713 aa1.97□□□□□ -2.09
NUP100YKL068W FYV6P53913 173 aa1.97□□□□□ -2.09
NUP100YKL068W SWS2P53937 143 aa1.97□□□□□ -2.09
NUP100YKL068W ODC1Q03028 310 aa1.97□□□□□ -2.09
NUP100YKL068W BNA5Q05979 453 aa1.97□□□□□ -2.09
NUP100YKL068W PEX30Q06169 523 aa1.97□□□□□ -2.09
NUP100YKL068W FCY22Q12119 530 aa1.97□□□□□ -2.09
NUP100YKL068W NSL1Q12143 216 aa1.97□□□□□ -2.09
NUP100YKL068W YDR018CQ12185 396 aa1.97□□□□□ -2.09
NUP100YKL068W TPO4Q12256 659 aa1.97□□□□□ -2.09
NUP100YKL068W RDL1Q12305 139 aaKnown RBP1.97□□□□□ -2.09
NUP100YKL068W SFM1Q12314 213 aa1.97□□□□□ -2.09
NUP100YKL068W TFC7Q12415 435 aa1.97□□□□□ -2.09
NUP100YKL068W YCR024C-BQ3E7Z8 88 aa1.97□□□□□ -2.09
NUP100YKL068W RAD50P12753 1312 aa1.97□□□□□ -2.09
NUP100YKL068W BCY1P07278 416 aaKnown RBP1.96□□□□□ -2.09
NUP100YKL068W UBC8P28263 218 aa1.96□□□□□ -2.09
NUP100YKL068W CAM1P29547 415 aaKnown RBP1.96□□□□□ -2.09
NUP100YKL068W TCA17P32613 152 aa1.96□□□□□ -2.09
NUP100YKL068W UPS2P35200 230 aa1.96□□□□□ -2.09
NUP100YKL068W YGR201CP42936 225 aa1.96□□□□□ -2.09
NUP100YKL068W GWT1P47026 490 aa1.96□□□□□ -2.09
NUP100YKL068W IKS1P47042 667 aa1.96□□□□□ -2.09
NUP100YKL068W YJR054WP47114 497 aa1.96□□□□□ -2.09
NUP100YKL068W TPN1P53099 579 aa1.96□□□□□ -2.09
NUP100YKL068W CWC25P53854 179 aaKnown RBP1.96□□□□□ -2.09
NUP100YKL068W TPS1Q00764 495 aaKnown RBP1.96□□□□□ -2.09
NUP100YKL068W NUP49Q02199 472 aa1.96□□□□□ -2.09
NUP100YKL068W ABF2Q02486 183 aa1.96□□□□□ -2.09
NUP100YKL068W CTL1Q03220 320 aaKnown RBP1.96□□□□□ -2.09
NUP100YKL068W SCS7Q03529 384 aa1.96□□□□□ -2.09
NUP100YKL068W ARO80Q04052 950 aa1.96□□□□□ -2.09
NUP100YKL068W YMR315WQ04869 349 aaKnown RBP1.96□□□□□ -2.09
NUP100YKL068W BCH1Q05029 724 aa1.96□□□□□ -2.09
NUP100YKL068W YLR031WQ07978 186 aa1.96□□□□□ -2.09
NUP100YKL068W THI20Q08224 551 aa1.96□□□□□ -2.09
NUP100YKL068W AGC1Q12482 902 aa1.96□□□□□ -2.09
NUP100YKL068W CSF1Q12150 2958 aa1.96□□□□□ -2.1
NUP100YKL068W IFM1P25038 676 aa1.96□□□□□ -2.1
NUP100YKL068W SRY1P36007 326 aa1.96□□□□□ -2.1
NUP100YKL068W YKL075CP36083 450 aa1.96□□□□□ -2.1
NUP100YKL068W HEK2P38199 381 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1 RIP-Chip
NUP100YKL068W YHR127WP38833 243 aaKnown RBP1.96□□□□□ -2.1
NUP100YKL068W PEX22P39718 180 aa1.96□□□□□ -2.1
NUP100YKL068W JAC1P53193 184 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms