RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A UTP15Q04305 513 aaKnown RBP2.26□□□□□ -2.05
SFT1YKL006C-A SPG4Q04438 115 aa2.26□□□□□ -2.05
SFT1YKL006C-A FAR8Q05040 523 aa2.26□□□□□ -2.05
SFT1YKL006C-A PEX10Q05568 337 aa2.26□□□□□ -2.05
SFT1YKL006C-A RRS1Q08746 203 aaKnown RBP2.26□□□□□ -2.05
SFT1YKL006C-A GRE1Q08969 168 aa2.26□□□□□ -2.05
SFT1YKL006C-A YPL278CQ08990 100 aa2.26□□□□□ -2.05
SFT1YKL006C-A SPT3P06844 337 aa2.25□□□□□ -2.05
SFT1YKL006C-A RPL35AP0CX84 120 aaKnown RBP2.25□□□□□ -2.05
SFT1YKL006C-A RPL35BP0CX85 120 aaKnown RBP2.25□□□□□ -2.05
SFT1YKL006C-A DPB2P24482 689 aaPredicted RBP2.25□□□□□ -2.05
SFT1YKL006C-A CAM1P29547 415 aaKnown RBP2.25□□□□□ -2.05
SFT1YKL006C-A SSO1P32867 290 aa2.25□□□□□ -2.05
SFT1YKL006C-A TIP20P33891 701 aa2.25□□□□□ -2.05
SFT1YKL006C-A MRPL3P36516 390 aa2.25□□□□□ -2.05
SFT1YKL006C-A RFT1P38206 574 aaPredicted RBP2.25□□□□□ -2.05
SFT1YKL006C-A SHE3P38272 425 aaKnown RBP2.25□□□□□ -2.05
SFT1YKL006C-A GGC1P38988 300 aa2.25□□□□□ -2.05
SFT1YKL006C-A YHB1P39676 399 aaKnown RBP2.25□□□□□ -2.05
SFT1YKL006C-A KRE29P40026 464 aa2.25□□□□□ -2.05
SFT1YKL006C-A YIL001WP40560 513 aa2.25□□□□□ -2.05
SFT1YKL006C-A ERG10P41338 398 aaKnown RBP2.25□□□□□ -2.05
SFT1YKL006C-A SNZ3P43545 298 aa2.25□□□□□ -2.05
SFT1YKL006C-A NUP57P48837 541 aa2.25□□□□□ -2.05
SFT1YKL006C-A FMP48P53233 369 aa2.25□□□□□ -2.05
SFT1YKL006C-A SNZ2P53824 298 aa2.25□□□□□ -2.05
SFT1YKL006C-A GIM5Q04493 163 aa2.25□□□□□ -2.05
SFT1YKL006C-A FUS2Q05670 677 aa2.25□□□□□ -2.05
SFT1YKL006C-A SEI1Q06058 285 aa2.25□□□□□ -2.05
SFT1YKL006C-A DXO1Q06349 442 aa2.25□□□□□ -2.05
SFT1YKL006C-A CDD1Q06549 142 aa2.25□□□□□ -2.05
SFT1YKL006C-A RRP40Q08285 240 aaKnown RBP2.25□□□□□ -2.05
SFT1YKL006C-A YAL063C-AQ3E791 96 aa2.25□□□□□ -2.05
SFT1YKL006C-A PHO80P20052 293 aa2.24□□□□□ -2.05
SFT1YKL006C-A PPH21P23594 369 aa2.24□□□□□ -2.05
SFT1YKL006C-A IMP1P28627 190 aa2.24□□□□□ -2.05
SFT1YKL006C-A VPH2P32341 215 aa2.24□□□□□ -2.05
SFT1YKL006C-A PRY2P36110 329 aa2.24□□□□□ -2.05
SFT1YKL006C-A RRG9P40156 214 aa2.24□□□□□ -2.05
SFT1YKL006C-A BMT5P40493 336 aa2.24□□□□□ -2.05
SFT1YKL006C-A YFL064CP43540 174 aa2.24□□□□□ -2.05
SFT1YKL006C-A PRP24P49960 444 aaKnown RBP2.24□□□□□ -2.05
SFT1YKL006C-A TOS8P53147 276 aa2.24□□□□□ -2.05
SFT1YKL006C-A EFM5P53200 248 aaKnown RBP2.24□□□□□ -2.05
SFT1YKL006C-A MRS2Q01926 470 aa2.24□□□□□ -2.05
SFT1YKL006C-A API2Q04413 109 aa2.24□□□□□ -2.05
SFT1YKL006C-A YPR147CQ06522 304 aaKnown RBP2.24□□□□□ -2.05
SFT1YKL006C-A GPM2Q12008 311 aa2.24□□□□□ -2.05
SFT1YKL006C-A TRM10Q12400 293 aa2.24□□□□□ -2.05
SFT1YKL006C-A COS2P0CX12 379 aa2.23□□□□□ -2.05
SFT1YKL006C-A COS3P0CX13 379 aa2.23□□□□□ -2.05
SFT1YKL006C-A SNA3P14359 133 aa2.23□□□□□ -2.05
SFT1YKL006C-A CAT2P32796 670 aaKnown RBP2.23□□□□□ -2.05
SFT1YKL006C-A AST1P35183 429 aa2.23□□□□□ -2.05
SFT1YKL006C-A POP8P38208 133 aa2.23□□□□□ -2.05
SFT1YKL006C-A TRM5P38793 499 aa2.23□□□□□ -2.05
SFT1YKL006C-A SEC72P39742 193 aaKnown RBP2.23□□□□□ -2.05
SFT1YKL006C-A RRT13P40042 185 aa2.23□□□□□ -2.05
SFT1YKL006C-A COS4P43542 379 aa2.23□□□□□ -2.05
SFT1YKL006C-A MCM22P47167 239 aa2.23□□□□□ -2.05
SFT1YKL006C-A INP1Q03694 420 aa2.23□□□□□ -2.05
SFT1YKL006C-A YMR244WQ04018 355 aa2.23□□□□□ -2.05
SFT1YKL006C-A MRX8Q05473 314 aa2.23□□□□□ -2.05
SFT1YKL006C-A HEM25Q07534 307 aa2.23□□□□□ -2.05
SFT1YKL006C-A YDL144CQ07589 356 aa2.23□□□□□ -2.05
SFT1YKL006C-A TPO4Q12256 659 aa2.23□□□□□ -2.05
SFT1YKL006C-A YPL229WQ99395 206 aa2.23□□□□□ -2.05
SFT1YKL006C-A URA6P15700 204 aa2.22□□□□□ -2.05
SFT1YKL006C-A SNF6P18888 332 aa2.22□□□□□ -2.05
SFT1YKL006C-A DBF2P22204 572 aa2.22□□□□□ -2.05
SFT1YKL006C-A SPS18P32572 300 aa2.22□□□□□ -2.05
SFT1YKL006C-A SRY1P36007 326 aa2.22□□□□□ -2.05
SFT1YKL006C-A DRE2P36152 348 aa2.22□□□□□ -2.05
SFT1YKL006C-A YCR087C-AP37263 153 aa2.22□□□□□ -2.05
SFT1YKL006C-A HMT1P38074 348 aa2.22□□□□□ -2.05
SFT1YKL006C-A YMR144WP40214 342 aaKnown RBP2.22□□□□□ -2.05
SFT1YKL006C-A YJR141WP47172 347 aaPredicted RBP2.22□□□□□ -2.05
SFT1YKL006C-A OST3P48439 350 aa2.22□□□□□ -2.05
SFT1YKL006C-A BRR6P53062 197 aa2.22□□□□□ -2.05
SFT1YKL006C-A MRH4P53166 561 aa2.22□□□□□ -2.05
SFT1YKL006C-A YGL034CP53186 121 aa2.22□□□□□ -2.05
SFT1YKL006C-A SLX9P53251 210 aaPredicted RBP2.22□□□□□ -2.05
SFT1YKL006C-A HST4P53688 370 aa2.22□□□□□ -2.05
SFT1YKL006C-A IGO1P53897 168 aa2.22□□□□□ -2.05
SFT1YKL006C-A FYV6P53913 173 aa2.22□□□□□ -2.05
SFT1YKL006C-A YNL046WP53956 172 aa2.22□□□□□ -2.05
SFT1YKL006C-A MET2P08465 486 aa2.21□□□□□ -2.06
SFT1YKL006C-A FBA1P14540 359 aaKnown RBP2.21□□□□□ -2.06
SFT1YKL006C-A ZRT3P34240 503 aa2.21□□□□□ -2.06
SFT1YKL006C-A MRPL39P36533 70 aa2.21□□□□□ -2.06
SFT1YKL006C-A ARN2P38724 620 aa2.21□□□□□ -2.06
SFT1YKL006C-A AVT6P40074 448 aa2.21□□□□□ -2.06
SFT1YKL006C-A SYF2P53277 215 aaPredicted RBP2.21□□□□□ -2.06
SFT1YKL006C-A AAH1P53909 347 aa2.21□□□□□ -2.06
SFT1YKL006C-A ACT1P60010 375 aaKnown RBP2.21□□□□□ -2.06
SFT1YKL006C-A YOL029CQ08187 201 aa2.21□□□□□ -2.06
SFT1YKL006C-A MRX4Q12467 430 aa2.21□□□□□ -2.06
SFT1YKL006C-A DFM1Q12743 341 aaKnown RBP2.21□□□□□ -2.06
SFT1YKL006C-A YOL085CQ99345 113 aa2.21□□□□□ -2.06
SFT1YKL006C-A AUS1Q08409 1394 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms