RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W TY1A-NL1Q12391 440 aaKnown RBP6.1□□□□□ -1.43
NMD5YJR132W TRM10Q12400 293 aa6.1□□□□□ -1.43
NMD5YJR132W GLN3P18494 730 aa6.1□□□□□ -1.43
NMD5YJR132W CEM1P39525 442 aa6.1□□□□□ -1.43
NMD5YJR132W YDL186WP48568 277 aa6.1□□□□□ -1.43
NMD5YJR132W YIP4P53093 235 aa6.1□□□□□ -1.43
NMD5YJR132W YGR151CP53287 111 aa6.1□□□□□ -1.43
NMD5YJR132W YNR071CP53757 342 aa6.1□□□□□ -1.43
NMD5YJR132W MRX8Q05473 314 aa6.1□□□□□ -1.43
NMD5YJR132W SPO14P36126 1683 aa6.1□□□□□ -1.43
NMD5YJR132W COX5BP00425 151 aa6.1□□□□□ -1.43
NMD5YJR132W VMA3P25515 160 aa6.1□□□□□ -1.43
NMD5YJR132W BUB2P26448 306 aaPredicted RBP6.1□□□□□ -1.43
NMD5YJR132W MOH1P38191 138 aa6.1□□□□□ -1.43
NMD5YJR132W YFR020WP43600 232 aa6.1□□□□□ -1.43
NMD5YJR132W MMS2P53152 137 aa6.1□□□□□ -1.43
NMD5YJR132W CDH1P53197 566 aa6.1□□□□□ -1.43
NMD5YJR132W CSL4P53859 292 aaPredicted RBP6.1□□□□□ -1.43
NMD5YJR132W ERG13P54839 491 aaKnown RBP6.1□□□□□ -1.43
NMD5YJR132W TDA6Q06466 467 aa6.1□□□□□ -1.43
NMD5YJR132W RAD28Q12021 506 aa6.1□□□□□ -1.43
NMD5YJR132W YKR104WP0CE69 306 aa6.09□□□□□ -1.43
NMD5YJR132W YFL068WP0CX99 160 aa6.09□□□□□ -1.43
NMD5YJR132W YLL066W-AP0CY00 160 aa6.09□□□□□ -1.43
NMD5YJR132W YLL067W-AP0CY01 160 aa6.09□□□□□ -1.43
NMD5YJR132W VRP1P37370 817 aa6.09□□□□□ -1.43
NMD5YJR132W MRH4P53166 561 aa6.09□□□□□ -1.43
NMD5YJR132W YGR273CP53329 174 aa6.09□□□□□ -1.43
NMD5YJR132W NRG1Q03125 231 aa6.09□□□□□ -1.43
NMD5YJR132W WTM2Q12206 467 aa6.09□□□□□ -1.43
NMD5YJR132W YCT1Q12235 531 aa6.09□□□□□ -1.43
NMD5YJR132W YDL199CQ12407 687 aa6.09□□□□□ -1.43
NMD5YJR132W POM34Q12445 299 aa6.09□□□□□ -1.43
NMD5YJR132W AHA1Q12449 350 aaKnown RBP6.09□□□□□ -1.43
NMD5YJR132W HIS7P33734 552 aaKnown RBP6.09□□□□□ -1.43
NMD5YJR132W VHS2P40463 436 aa6.09□□□□□ -1.43
NMD5YJR132W AYR1P40471 297 aa6.09□□□□□ -1.43
NMD5YJR132W MEP2P41948 499 aa6.09□□□□□ -1.43
NMD5YJR132W DAN1P47178 298 aa6.09□□□□□ -1.43
NMD5YJR132W NUP57P48837 541 aa6.09□□□□□ -1.43
NMD5YJR132W YNL092WP53934 400 aa6.09□□□□□ -1.43
NMD5YJR132W UPS3Q04006 179 aa6.09□□□□□ -1.43
NMD5YJR132W ISU2Q12056 156 aa6.09□□□□□ -1.43
NMD5YJR132W MDM32Q12171 622 aa6.09□□□□□ -1.43
NMD5YJR132W ARO1P08566 1588 aaKnown RBP6.09□□□□□ -1.43
NMD5YJR132W BAR1P12630 587 aa6.08□□□□□ -1.44
NMD5YJR132W ERD1P16151 362 aa6.08□□□□□ -1.44
NMD5YJR132W SPS18P32572 300 aa6.08□□□□□ -1.44
NMD5YJR132W IRS4P36115 615 aaKnown RBP6.08□□□□□ -1.44
NMD5YJR132W GAT2P40209 560 aa6.08□□□□□ -1.44
NMD5YJR132W MSB3P48566 633 aaPredicted RBP6.08□□□□□ -1.44
NMD5YJR132W MDM34P53083 459 aa6.08□□□□□ -1.44
NMD5YJR132W MRPL22P53881 309 aa6.08□□□□□ -1.44
NMD5YJR132W VPS28Q02767 242 aa6.08□□□□□ -1.44
NMD5YJR132W DET1Q99288 334 aaKnown RBP6.08□□□□□ -1.44
NMD5YJR132W MBA1P38300 278 aa6.08□□□□□ -1.44
NMD5YJR132W TSL1P38427 1098 aaKnown RBP6.08□□□□□ -1.44
NMD5YJR132W KRE29P40026 464 aa6.08□□□□□ -1.44
NMD5YJR132W YET2Q04210 160 aa6.08□□□□□ -1.44
NMD5YJR132W NUS1Q12063 375 aa6.08□□□□□ -1.44
NMD5YJR132W PST1Q12355 444 aa6.08□□□□□ -1.44
NMD5YJR132W MBR1P23493 339 aa6.08□□□□□ -1.44
NMD5YJR132W YGP1P38616 354 aaKnown RBP6.08□□□□□ -1.44
NMD5YJR132W RPS20P38701 121 aaKnown RBP6.08□□□□□ -1.44
NMD5YJR132W YHR078WP38799 552 aa6.08□□□□□ -1.44
NMD5YJR132W LYS12P40495 371 aaKnown RBP6.08□□□□□ -1.44
NMD5YJR132W SGA1P08019 549 aa6.07□□□□□ -1.44
NMD5YJR132W SNC2P33328 115 aa6.07□□□□□ -1.44
NMD5YJR132W YHR130CP38834 111 aa6.07□□□□□ -1.44
NMD5YJR132W SCS3P53012 380 aa6.07□□□□□ -1.44
NMD5YJR132W SOK2P53438 785 aaPredicted RBP6.07□□□□□ -1.44
NMD5YJR132W YRF1-1P0CX20 1796 aa6.07□□□□□ -1.44
NMD5YJR132W YRF1-5P0CX21 1796 aa6.07□□□□□ -1.44
NMD5YJR132W YRF1-8P0CX22 1796 aa6.07□□□□□ -1.44
NMD5YJR132W TOA2P32774 122 aa6.07□□□□□ -1.44
NMD5YJR132W RTC2P38279 296 aa6.07□□□□□ -1.44
NMD5YJR132W EHT1P38295 451 aa6.07□□□□□ -1.44
NMD5YJR132W HPA3P39979 161 aa6.07□□□□□ -1.44
NMD5YJR132W YER188WP40103 239 aa6.07□□□□□ -1.44
NMD5YJR132W HXT16P47185 567 aa6.07□□□□□ -1.44
NMD5YJR132W YDR415CQ04033 374 aaPredicted RBP6.07□□□□□ -1.44
NMD5YJR132W HNT1Q04344 158 aaKnown RBP6.07□□□□□ -1.44
NMD5YJR132W YBR085C-AO43137 85 aa6.06□□□□□ -1.44
NMD5YJR132W YML003WP0CF16 290 aa6.06□□□□□ -1.44
NMD5YJR132W LSB5P25369 354 aa6.06□□□□□ -1.44
NMD5YJR132W NAB2P32505 525 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
NMD5YJR132W EMC3P36039 253 aa6.06□□□□□ -1.44
NMD5YJR132W ASC1P38011 319 aaKnown RBP6.06□□□□□ -1.44
NMD5YJR132W KTR3P38130 404 aaPredicted RBP6.06□□□□□ -1.44
NMD5YJR132W TRS20P38334 175 aa6.06□□□□□ -1.44
NMD5YJR132W YJR015WP47090 510 aa6.06□□□□□ -1.44
NMD5YJR132W YPR202WQ08993 238 aa6.06□□□□□ -1.44
NMD5YJR132W PRR2Q12310 699 aa6.06□□□□□ -1.44
NMD5YJR132W PDR11P40550 1411 aa6.06□□□□□ -1.44
NMD5YJR132W YJL193WP39542 402 aa6.06□□□□□ -1.44
NMD5YJR132W MIT1P40002 666 aa6.06□□□□□ -1.44
NMD5YJR132W SNM1P40993 198 aa6.06□□□□□ -1.44
NMD5YJR132W CPR7P47103 393 aa6.06□□□□□ -1.44
NMD5YJR132W UBC11P52492 156 aa6.06□□□□□ -1.44
NMD5YJR132W MTM1P53320 366 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms