RNA–Protein interactions for RNA: YIR044C

YIR044C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR044C, Length 186 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR044CYIR044C MRPL49P40858 161 aaPredicted RBP0.63□□□□□ -2.31
YIR044CYIR044C GLG2P47011 380 aa0.63□□□□□ -2.31
YIR044CYIR044C EMC2P47133 292 aaKnown RBP0.63□□□□□ -2.31
YIR044CYIR044C SME1Q12330 94 aaPredicted RBP0.63□□□□□ -2.31
YIR044CYIR044C ATO3Q12359 275 aa0.63□□□□□ -2.31
YIR044CYIR044C EMC6Q12431 108 aa0.63□□□□□ -2.31
YIR044CYIR044C YIL002W-AQ3E7Z5 69 aa0.63□□□□□ -2.31
YIR044CYIR044C COX2P00410 251 aa0.62□□□□□ -2.31
YIR044CYIR044C MRP1P10662 321 aaKnown RBP0.62□□□□□ -2.31
YIR044CYIR044C CTR2P38865 189 aa0.62□□□□□ -2.31
YIR044CYIR044C DDI1P40087 428 aa0.62□□□□□ -2.31
YIR044CYIR044C OST2P46964 130 aa0.62□□□□□ -2.31
YIR044CYIR044C ALG11P53954 548 aaKnown RBP0.62□□□□□ -2.31
YIR044CYIR044C YPR147CQ06522 304 aaKnown RBP0.62□□□□□ -2.31
YIR044CYIR044C YLR030WQ07967 263 aa0.62□□□□□ -2.31
YIR044CYIR044C COQ10Q08058 207 aa0.62□□□□□ -2.31
YIR044CYIR044C MSA1Q08471 629 aa0.62□□□□□ -2.31
YIR044CYIR044C BTS1Q12051 335 aa0.62□□□□□ -2.31
YIR044CYIR044C YOR029WQ12243 111 aa0.62□□□□□ -2.31
YIR044CYIR044C FKS1P38631 1876 aaKnown RBP0.61□□□□□ -2.31
YIR044CYIR044C TCP1P12612 559 aaKnown RBP0.61□□□□□ -2.31
YIR044CYIR044C VPS3P23643 1011 aa0.61□□□□□ -2.31
YIR044CYIR044C SCM4P32564 187 aa0.61□□□□□ -2.31
YIR044CYIR044C VMA11P32842 164 aa0.61□□□□□ -2.31
YIR044CYIR044C RPT5P33297 434 aaKnown RBP0.61□□□□□ -2.31
YIR044CYIR044C RIB7P33312 244 aa0.61□□□□□ -2.31
YIR044CYIR044C SSH1P38353 490 aaKnown RBP0.61□□□□□ -2.31
YIR044CYIR044C YHR125WP38831 101 aa0.61□□□□□ -2.31
YIR044CYIR044C SHC1P39000 512 aa0.61□□□□□ -2.31
YIR044CYIR044C RTT105P40063 208 aa0.61□□□□□ -2.31
YIR044CYIR044C TIF34P40217 347 aaKnown RBP0.61□□□□□ -2.31
YIR044CYIR044C KAP114P53067 1004 aa0.61□□□□□ -2.31
YIR044CYIR044C YGL159WP53110 370 aa0.61□□□□□ -2.31
YIR044CYIR044C YDR209CQ03480 137 aa0.61□□□□□ -2.31
YIR044CYIR044C Q0255P03881 472 aa0.6□□□□□ -2.31
YIR044CYIR044C YKR104WP0CE69 306 aa0.6□□□□□ -2.31
YIR044CYIR044C DAL82P21705 255 aa0.6□□□□□ -2.31
YIR044CYIR044C ERG24P32462 438 aaKnown RBP0.6□□□□□ -2.31
YIR044CYIR044C SGE1P33335 543 aa0.6□□□□□ -2.31
YIR044CYIR044C PRS2P38620 318 aaKnown RBP0.6□□□□□ -2.31
YIR044CYIR044C GOS1P38736 223 aa0.6□□□□□ -2.31
YIR044CYIR044C DSN1P40568 576 aa0.6□□□□□ -2.31
YIR044CYIR044C GPI8P49018 411 aa0.6□□□□□ -2.31
YIR044CYIR044C MPP6P53725 186 aaPredicted RBP0.6□□□□□ -2.31
YIR044CYIR044C ASI3P53983 676 aa0.6□□□□□ -2.31
YIR044CYIR044C RRS1Q08746 203 aaKnown RBP0.6□□□□□ -2.31
YIR044CYIR044C EMP46Q12396 444 aa0.6□□□□□ -2.31
YIR044CYIR044C YHR139C-AO13536 103 aa0.59□□□□□ -2.31
YIR044CYIR044C PUT1P09368 476 aa0.59□□□□□ -2.31
YIR044CYIR044C DSF1P0CX08 502 aa0.59□□□□□ -2.31
YIR044CYIR044C YNR073CP0CX09 502 aa0.59□□□□□ -2.31
YIR044CYIR044C RPS5P26783 225 aaKnown RBP0.59□□□□□ -2.31
YIR044CYIR044C CYT2Q00873 224 aa0.59□□□□□ -2.31
YIR044CYIR044C GOT1Q03554 138 aa0.59□□□□□ -2.31
YIR044CYIR044C MRPS8Q03799 155 aa0.59□□□□□ -2.31
YIR044CYIR044C YPR098CQ06089 161 aa0.59□□□□□ -2.31
YIR044CYIR044C YOR186WQ08560 144 aa0.59□□□□□ -2.31
YIR044CYIR044C YPL229WQ99395 206 aa0.59□□□□□ -2.31
YIR044CYIR044C YLR462WO13556 202 aa0.58□□□□□ -2.32
YIR044CYIR044C COX5AP00424 153 aa0.58□□□□□ -2.32
YIR044CYIR044C IPP1P00817 287 aaKnown RBP0.58□□□□□ -2.32
YIR044CYIR044C RPL24AP04449 155 aaKnown RBP0.58□□□□□ -2.32
YIR044CYIR044C RAD3P06839 778 aa0.58□□□□□ -2.32
YIR044CYIR044C ADH3P07246 375 aaKnown RBP0.58□□□□□ -2.32
YIR044CYIR044C SCL1P21243 252 aaKnown RBP0.58□□□□□ -2.32
YIR044CYIR044C HOM6P31116 359 aaKnown RBP0.58□□□□□ -2.32
YIR044CYIR044C COS8P38723 381 aa0.58□□□□□ -2.32
YIR044CYIR044C YEL075CP39972 122 aa0.58□□□□□ -2.32
YIR044CYIR044C YER189WP40104 122 aa0.58□□□□□ -2.32
YIR044CYIR044C ARC15P40518 154 aaRIP-Chip data0.58□□□□□ -2.32not detected
YIR044CYIR044C CIS3P47001 227 aa0.58□□□□□ -2.32
YIR044CYIR044C JHD2P47156 728 aaPredicted RBP0.58□□□□□ -2.32
YIR044CYIR044C MRH4P53166 561 aa0.58□□□□□ -2.32
YIR044CYIR044C YNL134CP53912 376 aaKnown RBP0.58□□□□□ -2.32
YIR044CYIR044C RHO3Q00245 231 aaKnown RBP0.58□□□□□ -2.32
YIR044CYIR044C SPG4Q04438 115 aa0.58□□□□□ -2.32
YIR044CYIR044C YDR124WQ04608 324 aa0.58□□□□□ -2.32
YIR044CYIR044C ADH6Q04894 360 aaKnown RBP0.58□□□□□ -2.32
YIR044CYIR044C ATG39Q06159 398 aa0.58□□□□□ -2.32
YIR044CYIR044C SDO1Q07953 250 aaKnown RBP0.58□□□□□ -2.32
YIR044CYIR044C RRT8Q08219 342 aa0.58□□□□□ -2.32
YIR044CYIR044C RRP36Q12481 300 aaPredicted RBP0.58□□□□□ -2.32
YIR044CYIR044C CDC7P06243 507 aa0.57□□□□□ -2.32
YIR044CYIR044C MSF1P08425 469 aa0.57□□□□□ -2.32
YIR044CYIR044C CCA1P21269 546 aa0.57□□□□□ -2.32
YIR044CYIR044C DRE2P36152 348 aa0.57□□□□□ -2.32
YIR044CYIR044C MRPL39P36533 70 aa0.57□□□□□ -2.32
YIR044CYIR044C MRX3P38172 270 aa0.57□□□□□ -2.32
YIR044CYIR044C AYR1P40471 297 aa0.57□□□□□ -2.32
YIR044CYIR044C PRM10P42946 383 aa0.57□□□□□ -2.32
YIR044CYIR044C YAR1P46683 200 aa0.57□□□□□ -2.32
YIR044CYIR044C USE1P53146 245 aa0.57□□□□□ -2.32
YIR044CYIR044C YNL046WP53956 172 aa0.57□□□□□ -2.32
YIR044CYIR044C KAP95Q06142 861 aaKnown RBP0.57□□□□□ -2.32
YIR044CYIR044C ATG17Q06410 417 aa0.57□□□□□ -2.32
YIR044CYIR044C RRP40Q08285 240 aaKnown RBP0.57□□□□□ -2.32
YIR044CYIR044C AKR2Q12013 749 aa0.57□□□□□ -2.32
YIR044CYIR044C YLR126CQ12288 251 aa0.57□□□□□ -2.32
YIR044CYIR044C FCY2P17064 533 aa0.56□□□□□ -2.32
YIR044CYIR044C PEX4P29340 183 aa0.56□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms