RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W FRE8Q12209 686 aa5.41□□□□□ -1.54
MSP1YGR028W FSH3Q99369 266 aa5.41□□□□□ -1.54
MSP1YGR028W CCW14O13547 238 aa5.4□□□□□ -1.54
MSP1YGR028W REP1P03871 373 aa5.4□□□□□ -1.54
MSP1YGR028W URA3P03962 267 aa5.4□□□□□ -1.54
MSP1YGR028W RPL39P04650 51 aa5.4□□□□□ -1.54
MSP1YGR028W PHO80P20052 293 aa5.4□□□□□ -1.54
MSP1YGR028W CLG1P35190 452 aa5.4□□□□□ -1.54
MSP1YGR028W YPT10P38146 199 aa5.4□□□□□ -1.54
MSP1YGR028W ECM8P38246 354 aa5.4□□□□□ -1.54
MSP1YGR028W YBR096WP38256 230 aa5.4□□□□□ -1.54
MSP1YGR028W CTR2P38865 189 aa5.4□□□□□ -1.54
MSP1YGR028W HIS6P40545 261 aa5.4□□□□□ -1.54
MSP1YGR028W YJL016WP47072 561 aa5.4□□□□□ -1.54
MSP1YGR028W COS10P52924 374 aa5.4□□□□□ -1.54
MSP1YGR028W GRX5Q02784 150 aa5.4□□□□□ -1.54
MSP1YGR028W YMR099CQ03161 297 aaKnown RBP5.4□□□□□ -1.54
MSP1YGR028W HOT1Q03213 719 aa5.4□□□□□ -1.54
MSP1YGR028W AIM36Q03798 255 aa5.4□□□□□ -1.54
MSP1YGR028W SPC19Q03954 165 aa5.4□□□□□ -1.54
MSP1YGR028W CSI2Q08054 341 aa5.4□□□□□ -1.54
MSP1YGR028W RRS1Q08746 203 aaKnown RBP5.4□□□□□ -1.54
MSP1YGR028W YLR108CQ12259 485 aa5.4□□□□□ -1.54
MSP1YGR028W RRI1Q12468 440 aa5.4□□□□□ -1.54
MSP1YGR028W YCL048W-AQ2V2Q2 79 aa5.4□□□□□ -1.54
MSP1YGR028W MES1P00958 751 aaKnown RBP5.39□□□□□ -1.55
MSP1YGR028W RPL6BP05739 176 aaKnown RBP5.39□□□□□ -1.55
MSP1YGR028W ATR1P13090 542 aa5.39□□□□□ -1.55
MSP1YGR028W MSI1P13712 422 aa5.39□□□□□ -1.55
MSP1YGR028W ARO3P14843 370 aaKnown RBP5.39□□□□□ -1.55
MSP1YGR028W DBF2P22204 572 aa5.39□□□□□ -1.55
MSP1YGR028W YLF2P38746 405 aa5.39□□□□□ -1.55
MSP1YGR028W SNL1P40548 159 aa5.39□□□□□ -1.55
MSP1YGR028W HOF1Q05080 669 aa5.39□□□□□ -1.55
MSP1YGR028W MRX8Q05473 314 aa5.39□□□□□ -1.55
MSP1YGR028W RBS1Q05672 457 aaKnown RBP5.39□□□□□ -1.55
MSP1YGR028W AIM6Q07716 390 aa5.39□□□□□ -1.55
MSP1YGR028W RKM1Q08961 583 aaPredicted RBP5.39□□□□□ -1.55
MSP1YGR028W TMA7Q3E764 64 aaKnown RBP5.39□□□□□ -1.55
MSP1YGR028W PDE2P06776 526 aa5.38□□□□□ -1.55
MSP1YGR028W HNM1P19807 563 aa5.38□□□□□ -1.55
MSP1YGR028W RPB9P27999 122 aa5.38□□□□□ -1.55
MSP1YGR028W SUR1P33300 382 aa5.38□□□□□ -1.55
MSP1YGR028W SDH8P38345 138 aa5.38□□□□□ -1.55
MSP1YGR028W ARO9P38840 513 aaPredicted RBP5.38□□□□□ -1.55
MSP1YGR028W IPT1P38954 527 aa5.38□□□□□ -1.55
MSP1YGR028W OST1P41543 476 aaKnown RBP5.38□□□□□ -1.55
MSP1YGR028W YHC3P47040 408 aa5.38□□□□□ -1.55
MSP1YGR028W RSM23Q01163 450 aa5.38□□□□□ -1.55
MSP1YGR028W DIG2Q03373 323 aaKnown RBP5.38□□□□□ -1.55
MSP1YGR028W YDR391CQ04170 232 aa5.38□□□□□ -1.55
MSP1YGR028W YMR315WQ04869 349 aaKnown RBP5.38□□□□□ -1.55
MSP1YGR028W TPO3Q06451 622 aa5.38□□□□□ -1.55
MSP1YGR028W PST2Q12335 198 aaKnown RBP5.38□□□□□ -1.55
MSP1YGR028W PCL9Q12477 304 aa5.38□□□□□ -1.55
MSP1YGR028W SCEIP03882 235 aa5.37□□□□□ -1.55
MSP1YGR028W RPS5P26783 225 aaKnown RBP5.37□□□□□ -1.55
MSP1YGR028W DEG1P31115 442 aaKnown RBP5.37□□□□□ -1.55
MSP1YGR028W MCH2P36032 473 aa5.37□□□□□ -1.55
MSP1YGR028W HOT13P36078 116 aa5.37□□□□□ -1.55
MSP1YGR028W YPK3P38070 525 aa5.37□□□□□ -1.55
MSP1YGR028W CTK2P46962 323 aa5.37□□□□□ -1.55
MSP1YGR028W TAX4P47030 604 aa5.37□□□□□ -1.55
MSP1YGR028W DUG3P53871 357 aa5.37□□□□□ -1.55
MSP1YGR028W GPI17Q04080 534 aa5.37□□□□□ -1.55
MSP1YGR028W YDR114CQ04597 100 aa5.37□□□□□ -1.55
MSP1YGR028W RNH1Q04740 348 aa5.37□□□□□ -1.55
MSP1YGR028W YLR345WQ06137 509 aa5.37□□□□□ -1.55
MSP1YGR028W ORM2Q06144 216 aa5.37□□□□□ -1.55
MSP1YGR028W YPL119C-AQ3E751 87 aa5.37□□□□□ -1.55
MSP1YGR028W YML003WP0CF16 290 aa5.36□□□□□ -1.55
MSP1YGR028W FUN19P28003 413 aaPredicted RBP5.36□□□□□ -1.55
MSP1YGR028W NDC1P32500 655 aa5.36□□□□□ -1.55
MSP1YGR028W SSE2P32590 693 aaKnown RBP5.36□□□□□ -1.55
MSP1YGR028W VMA11P32842 164 aa5.36□□□□□ -1.55
MSP1YGR028W FRM2P37261 193 aa5.36□□□□□ -1.55
MSP1YGR028W YHR035WP38769 630 aa5.36□□□□□ -1.55
MSP1YGR028W AIM10P39965 576 aaKnown RBP5.36□□□□□ -1.55
MSP1YGR028W APJ1P53940 528 aa5.36□□□□□ -1.55
MSP1YGR028W COG5P53951 403 aa5.36□□□□□ -1.55
MSP1YGR028W YNL046WP53956 172 aa5.36□□□□□ -1.55
MSP1YGR028W SAM50P53969 484 aa5.36□□□□□ -1.55
MSP1YGR028W FIN1Q03898 291 aa5.36□□□□□ -1.55
MSP1YGR028W GMC1Q04399 608 aa5.36□□□□□ -1.55
MSP1YGR028W TDH3P00359 332 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
MSP1YGR028W SHE1P38200 338 aa5.35□□□□□ -1.55
MSP1YGR028W YFL015CP43578 164 aa5.35□□□□□ -1.55
MSP1YGR028W CIN2P46670 268 aa5.35□□□□□ -1.55
MSP1YGR028W RIM9Q04734 239 aa5.35□□□□□ -1.55
MSP1YGR028W PUT3P25502 979 aaPredicted RBP5.34□□□□□ -1.55
MSP1YGR028W ANR2P36090 516 aaPredicted RBP5.34□□□□□ -1.55
MSP1YGR028W PUG1P40100 303 aa5.34□□□□□ -1.55
MSP1YGR028W YER188WP40103 239 aa5.34□□□□□ -1.55
MSP1YGR028W RNH201P53942 307 aa5.34□□□□□ -1.55
MSP1YGR028W YDC1Q02896 317 aa5.34□□□□□ -1.55
MSP1YGR028W YMR087WQ04299 284 aa5.34□□□□□ -1.55
MSP1YGR028W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
MSP1YGR028W MSA1Q08471 629 aa5.34□□□□□ -1.55
MSP1YGR028W USB1Q12208 290 aaKnown RBP5.34□□□□□ -1.55
MSP1YGR028W YER145C-AA0A023PYF4 145 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms