RNA–Protein interactions for RNA: YGL220W

FRA2, Transcript of Protein involved in negative regulation of iron regulon transcription, yeast

Gene FRA2, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRA2	YGL220W	MAL32	P38158	584 aa		4	□□□□□ -1.77
FRA2	YGL220W	GAB1	P41733	394 aa		4	□□□□□ -1.77
FRA2	YGL220W	ALB1	P47019	175 aa	Predicted RBP	4	□□□□□ -1.77
FRA2	YGL220W	APS3	P47064	194 aa		4	□□□□□ -1.77
FRA2	YGL220W	RPS12	P48589	143 aa	Known RBP	4	□□□□□ -1.77
FRA2	YGL220W	USE1	P53146	245 aa		4	□□□□□ -1.77
FRA2	YGL220W	MAL12	P53341	584 aa		4	□□□□□ -1.77
FRA2	YGL220W	YDR476C	Q03362	224 aa		4	□□□□□ -1.77
FRA2	YGL220W	DYN3	Q04949	312 aa		4	□□□□□ -1.77
FRA2	YGL220W	YPR091C	Q06833	770 aa		4	□□□□□ -1.77
FRA2	YGL220W	GAT3	Q07928	141 aa		4	□□□□□ -1.77
FRA2	YGL220W	YPR202W	Q08993	238 aa		4	□□□□□ -1.77
FRA2	YGL220W	NSL1	Q12143	216 aa		4	□□□□□ -1.77
FRA2	YGL220W	SET6	Q12529	373 aa		4	□□□□□ -1.77
FRA2	YGL220W	YKL018C-A	Q3E7A7	99 aa		4	□□□□□ -1.77
FRA2	YGL220W	DET1	Q99288	334 aa	Known RBP	4	□□□□□ -1.77
FRA2	YGL220W	MATALPHA1	P0CY06	175 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	HMLALPHA1	P0CY07	175 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	KSS1	P14681	368 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	DEP1	P31385	405 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	GPX2	P38143	162 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	TRM5	P38793	499 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	MST28	P39552	234 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	PHB1	P40961	287 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	PSA1	P41940	361 aa	Known RBP	3.99	□□□□□ -1.77
FRA2	YGL220W	ABM1	P47146	123 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	PAC10	P48363	199 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	AVT4	P50944	713 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	TPC1	P53257	314 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	RSC9	Q03124	581 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	KRE28	Q04431	385 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	TMS1	Q12116	473 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	YLR108C	Q12259	485 aa		3.99	□□□□□ -1.77
FRA2	YGL220W	SLH1	P53327	1967 aa	Known RBP	3.98	□□□□□ -1.77
FRA2	YGL220W	YBR056W-A	I2HB52	66 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	ATP6	P00854	259 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	RPL20A	P0CX23	172 aa	Known RBP	3.98	□□□□□ -1.77
FRA2	YGL220W	RPL20B	P0CX24	172 aa	Predicted RBP	3.98	□□□□□ -1.77
FRA2	YGL220W	ZWF1	P11412	505 aa	Known RBP	3.98	□□□□□ -1.77
FRA2	YGL220W	ZRC1	P20107	442 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	MCK1	P21965	375 aa	Known RBP	3.98	□□□□□ -1.77
FRA2	YGL220W	ATP7	P30902	174 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	CHK1	P38147	527 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	YHR035W	P38769	630 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	FLO5	P38894	1075 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	SLM1	P40485	686 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	YGR210C	P42942	411 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	TMA22	P47089	198 aa	Predicted RBP	3.98	□□□□□ -1.77
FRA2	YGL220W	CAF40	P53829	373 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	YPL080C	Q02826	108 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	YPL077C	Q02831	240 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	GGA1	Q06336	557 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	ASR1	Q06834	288 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	YPL199C	Q08954	240 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	ATX2	Q12067	313 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	MDM32	Q12171	622 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	PSF1	Q12488	208 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	CYR1	P08678	2026 aa	Known RBP	3.98	□□□□□ -1.77
FRA2	YGL220W	HFA1	P32874	2273 aa		3.98	□□□□□ -1.77
FRA2	YGL220W	STP22	P25604	385 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	YKL063C	P35725	167 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	OM14	P38325	134 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	RCK1	P38622	512 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	PCL6	P40038	420 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	YIL169C	P40442	995 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	YIL024C	P40543	189 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	YCH1	P42937	148 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	MDV1	P47025	714 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	YLR460C	P54007	376 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	YMR181C	Q03231	154 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	YDR209C	Q03480	137 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	YDR415C	Q04033	374 aa	Predicted RBP	3.97	□□□□□ -1.77
FRA2	YGL220W	YMR226C	Q05016	267 aa	Known RBP	3.97	□□□□□ -1.77
FRA2	YGL220W	SEI1	Q06058	285 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	NDE2	Q07500	545 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	MSH5	Q12175	901 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	CRC1	Q12289	327 aa		3.97	□□□□□ -1.77
FRA2	YGL220W	RPS5	P26783	225 aa	Known RBP	3.96	□□□□□ -1.78
FRA2	YGL220W	PPZ2	P33329	710 aa		3.96	□□□□□ -1.78
FRA2	YGL220W	ECM4	P36156	370 aa		3.96	□□□□□ -1.78
FRA2	YGL220W	DTR1	P38125	572 aa		3.96	□□□□□ -1.78
FRA2	YGL220W	RIB5	P38145	238 aa		3.96	□□□□□ -1.78
FRA2	YGL220W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
FRA2	YGL220W	MTW1	P39731	289 aa		3.96	□□□□□ -1.78
FRA2	YGL220W	AST2	P39945	430 aa	Known RBP	3.96	□□□□□ -1.78
FRA2	YGL220W	CPD1	P53314	239 aa		3.96	□□□□□ -1.78
FRA2	YGL220W	COS6	P53344	381 aa		3.96	□□□□□ -1.78
FRA2	YGL220W	HCH1	P53834	153 aa		3.96	□□□□□ -1.78
FRA2	YGL220W	SWP1	Q02795	286 aa		3.96	□□□□□ -1.78
FRA2	YGL220W	YOL131W	Q08270	108 aa		3.96	□□□□□ -1.78
FRA2	YGL220W	YOR342C	Q12182	319 aa		3.96	□□□□□ -1.78
FRA2	YGL220W	RPL42A	P0CX27	106 aa	Known RBP	3.95	□□□□□ -1.78
FRA2	YGL220W	RPL42B	P0CX28	106 aa	Known RBP	3.95	□□□□□ -1.78
FRA2	YGL220W	YAP1	P19880	650 aa	Known RBP	3.95	□□□□□ -1.78
FRA2	YGL220W	PEX3	P28795	441 aa		3.95	□□□□□ -1.78
FRA2	YGL220W	LHP1	P33399	275 aa	Known RBP	3.95	□□□□□ -1.78
FRA2	YGL220W	NUF2	P33895	451 aa		3.95	□□□□□ -1.78
FRA2	YGL220W	YOR062C	P36025	268 aa		3.95	□□□□□ -1.78
FRA2	YGL220W	FZO1	P38297	855 aa		3.95	□□□□□ -1.78
FRA2	YGL220W	RFC4	P40339	323 aa	Known RBP	3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms